Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11g17
         (739 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC111750-1|AAI11751.1| 1025|Homo sapiens interferon induced with...    31   5.7  
BC078180-1|AAH78180.1|  772|Homo sapiens IFIH1 protein protein.        31   5.7  
AY017378-1|AAG54076.1| 1025|Homo sapiens RNA helicase-DEAD box p...    31   5.7  
AF095844-1|AAG34368.1| 1025|Homo sapiens melanoma differentiatio...    31   5.7  
AC010876-1|AAX93137.1|  435|Homo sapiens unknown protein.              31   5.7  

>BC111750-1|AAI11751.1| 1025|Homo sapiens interferon induced with
           helicase C domain 1 protein.
          Length = 1025

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = -1

Query: 727 RNLAISLNRASDILNINVYIPMAHLD-RRRAKTPARWKILLLSIITSPHLFTSQF 566
           +N+ I L   S    + VYI   HLD +++A  P +  +L+  ++    LF  +F
Sbjct: 323 KNIIICLPTGSGKTRVAVYIAKDHLDKKKKASEPGKVIVLVNKVLLVEQLFRKEF 377


>BC078180-1|AAH78180.1|  772|Homo sapiens IFIH1 protein protein.
          Length = 772

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = -1

Query: 727 RNLAISLNRASDILNINVYIPMAHLD-RRRAKTPARWKILLLSIITSPHLFTSQF 566
           +N+ I L   S    + VYI   HLD +++A  P +  +L+  ++    LF  +F
Sbjct: 323 KNIIICLPTGSGKTRVAVYIAKDHLDKKKKASEPGKVIVLVNKVLLVEQLFRKEF 377


>AY017378-1|AAG54076.1| 1025|Homo sapiens RNA helicase-DEAD box
           protein RH116 protein.
          Length = 1025

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = -1

Query: 727 RNLAISLNRASDILNINVYIPMAHLD-RRRAKTPARWKILLLSIITSPHLFTSQF 566
           +N+ I L   S    + VYI   HLD +++A  P +  +L+  ++    LF  +F
Sbjct: 323 KNIIICLPTGSGKTRVAVYIAKDHLDKKKKASEPGKVIVLVNKVLLVEQLFRKEF 377


>AF095844-1|AAG34368.1| 1025|Homo sapiens melanoma differentiation
           associated protein-5 protein.
          Length = 1025

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = -1

Query: 727 RNLAISLNRASDILNINVYIPMAHLD-RRRAKTPARWKILLLSIITSPHLFTSQF 566
           +N+ I L   S    + VYI   HLD +++A  P +  +L+  ++    LF  +F
Sbjct: 323 KNIIICLPTGSGKTRVAVYIAKDHLDKKKKASEPGKVIVLVNKVLLVEQLFRKEF 377


>AC010876-1|AAX93137.1|  435|Homo sapiens unknown protein.
          Length = 435

 Score = 30.7 bits (66), Expect = 5.7
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = -1

Query: 727 RNLAISLNRASDILNINVYIPMAHLD-RRRAKTPARWKILLLSIITSPHLFTSQF 566
           +N+ I L   S    + VYI   HLD +++A  P +  +L+  ++    LF  +F
Sbjct: 323 KNIIICLPTGSGKTRVAVYIAKDHLDKKKKASEPGKVIVLVNKVLLVEQLFRKEF 377


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,376,551
Number of Sequences: 237096
Number of extensions: 2487206
Number of successful extensions: 4700
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4700
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)