Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11g17
         (739 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97189-1|AAC48164.1|  623|Caenorhabditis elegans Hypothetical pr...    31   1.1  
U10402-7|AAA19069.1|  192|Caenorhabditis elegans C. elegans neur...    29   4.5  
AL110485-2|CAE45741.1| 1021|Caenorhabditis elegans Hypothetical ...    28   6.0  
AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical ...    28   6.0  
AF016443-1|AAC24277.1|  366|Caenorhabditis elegans Hypothetical ...    28   6.0  
AC024775-1|AAK68455.1|  456|Caenorhabditis elegans Hypothetical ...    28   6.0  
U49829-6|AAA93387.1|  498|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>U97189-1|AAC48164.1|  623|Caenorhabditis elegans Hypothetical
           protein C48B6.4 protein.
          Length = 623

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 10/28 (35%), Positives = 20/28 (71%)
 Frame = +1

Query: 358 LIECKLNGNGLDIYVIDPNITRTNEFFS 441
           ++E  +NG+GL+   + P+ TRT +F++
Sbjct: 236 MVESSINGHGLEFECLGPDATRTQDFWT 263


>U10402-7|AAA19069.1|  192|Caenorhabditis elegans C. elegans neuro d
           homolog protein1 protein.
          Length = 192

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -2

Query: 639 PRHPLGGKSCCSLSSPAHTCSPPSFY 562
           P HP    S  S SSP+ +CSPP +Y
Sbjct: 132 PSHPPPHSSFSS-SSPSSSCSPPQYY 156


>AL110485-2|CAE45741.1| 1021|Caenorhabditis elegans Hypothetical
           protein Y46G5A.1b protein.
          Length = 1021

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -3

Query: 650 PSTSQDTRSVENLAALYHHQPTLVHLPVSIT 558
           PS  ++++        +HHQPT++H P+  T
Sbjct: 107 PSRDRESQPPPTQPRHHHHQPTVIHHPIRST 137


>AL110485-1|CAB60374.3| 1085|Caenorhabditis elegans Hypothetical
           protein Y46G5A.1a protein.
          Length = 1085

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -3

Query: 650 PSTSQDTRSVENLAALYHHQPTLVHLPVSIT 558
           PS  ++++        +HHQPT++H P+  T
Sbjct: 107 PSRDRESQPPPTQPRHHHHQPTVIHHPIRST 137


>AF016443-1|AAC24277.1|  366|Caenorhabditis elegans Hypothetical
           protein C17E7.5 protein.
          Length = 366

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 15/53 (28%), Positives = 25/53 (47%)
 Frame = +3

Query: 510 ES*PVGSG*GEPKIVLSYRNWEVNKCGLVMIESSKIFHRAGVLARRRSKCAIG 668
           ES P      + K  + +R    N  G++  ++ K+F+R  V+  R  KC  G
Sbjct: 26  ESSPFSQDLQQKKCAICFRPAFSNNYGVLTCDACKMFYRRIVILNREYKCKYG 78


>AC024775-1|AAK68455.1|  456|Caenorhabditis elegans Hypothetical
           protein Y41D4A.5 protein.
          Length = 456

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -3

Query: 659 TFGPSTSQDTRSVENLAALYHHQPTLVHL 573
           T GPST Q T ++ N   L+HHQ +  H+
Sbjct: 395 TTGPSTDQ-TATIANYNQLHHHQSSSNHM 422


>U49829-6|AAA93387.1|  498|Caenorhabditis elegans Hypothetical
           protein F27D9.2 protein.
          Length = 498

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 11/25 (44%), Positives = 18/25 (72%)
 Frame = -3

Query: 464 RVPQKRSPLKNSFVLVIFGSMTYMS 390
           R+ Q R PL   F+++ FG++TY+S
Sbjct: 103 RIGQVRFPLIVGFIVMAFGNITYLS 127


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,689,565
Number of Sequences: 27780
Number of extensions: 403321
Number of successful extensions: 1067
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1067
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)