Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11g15
         (679 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    23   3.0  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   3.0  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           22   4.0  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   4.0  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   5.3  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   7.0  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   9.3  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   9.3  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   9.3  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = +3

Query: 372 FWSWRSYVEYV 404
           FWS++SY+ Y+
Sbjct: 125 FWSYQSYMSYI 135


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = +3

Query: 372 FWSWRSYVEYV 404
           FWS++SY+ Y+
Sbjct: 125 FWSYQSYMSYI 135


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +3

Query: 192 QTKLTRPRCSQGSVKDTPKYSEPNN 266
           Q  L  P CS+ S   TP +S  ++
Sbjct: 188 QILLPTPTCSEASSSPTPSHSSESS 212


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +2

Query: 449 FFSYIKCSVHGDYLHCLLVEFKKTIRVFEL*MLN 550
           F  Y  C       +CL V+F+K + + EL  +N
Sbjct: 330 FILYFICDEAHYASNCLRVQFQKKLLLVELSWMN 363


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 103 PNGILAQIGGKRQGPAEDHQNDL 171
           P     QIG +R  P   HQN++
Sbjct: 385 PESPYPQIGSERATPVGYHQNEV 407


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +3

Query: 375 WSWRSYVEYVSQSKII*SIFMQHFFFFRI*SAVCMVITYIVF*LN 509
           +SW S   + S+  I  SIFM    F+RI ++   + T+  F  N
Sbjct: 224 FSWYSKKVFYSKIIISGSIFMTTTSFYRILNSGYNLTTFGSFIFN 268


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +3

Query: 147 C*RPPKRPSSAKTRVQTKLTRPRCSQGS 230
           C R   RPSS ++    ++ +P   QG+
Sbjct: 196 CTRYSDRPSSGRSPRTRRVKKPGAKQGA 223


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 431 FYATFFFFSYI 463
           FY+ FF+ SYI
Sbjct: 84  FYSYFFYLSYI 94


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 431 FYATFFFFSYI 463
           FY+ FF+ SYI
Sbjct: 40  FYSYFFYLSYI 50


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,318
Number of Sequences: 336
Number of extensions: 3520
Number of successful extensions: 21
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)