Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11g13
         (365 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q1FMZ4 Cluster: Putative uncharacterized protein precur...    31   8.6  
UniRef50_A6EA62 Cluster: Alpha-L-rhamnosidase; n=1; Pedobacter s...    31   8.6  

>UniRef50_Q1FMZ4 Cluster: Putative uncharacterized protein
           precursor; n=1; Clostridium phytofermentans ISDg|Rep:
           Putative uncharacterized protein precursor - Clostridium
           phytofermentans ISDg
          Length = 772

 Score = 30.7 bits (66), Expect = 8.6
 Identities = 18/64 (28%), Positives = 34/64 (53%)
 Frame = +3

Query: 75  FLLIM*LCLYKILLFML*KAVFQSGFFSMIYINVNGFQTKNKSQIRIQLSAVLFESD*FK 254
           FL ++  CLY ++L ++   +F +  F +IY+ + G   K +    I +  +LF +  F 
Sbjct: 694 FLCLLLECLYYVILAVMISILFGTICFKIIYL-IIGMDVKMQFSSIIGMGLILFLTTIFT 752

Query: 255 AFLI 266
            FL+
Sbjct: 753 NFLV 756


>UniRef50_A6EA62 Cluster: Alpha-L-rhamnosidase; n=1; Pedobacter sp.
           BAL39|Rep: Alpha-L-rhamnosidase - Pedobacter sp. BAL39
          Length = 792

 Score = 30.7 bits (66), Expect = 8.6
 Identities = 9/18 (50%), Positives = 16/18 (88%)
 Frame = +2

Query: 170 KCQWLPDEKQITNSYPII 223
           K +WL D+K++TN+YP++
Sbjct: 272 KVEWLIDQKELTNAYPVL 289


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 279,617,505
Number of Sequences: 1657284
Number of extensions: 4729445
Number of successful extensions: 7789
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7789
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 13220924981
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)