Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11g13
         (365 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y08160-1|CAA69352.1| 1745|Drosophila melanogaster dilute class u...    27   7.5  
BT010003-1|AAQ22472.1| 1401|Drosophila melanogaster RE30195p pro...    27   7.5  
AF003826-1|AAC99496.1| 1792|Drosophila melanogaster myosin V pro...    27   7.5  
AE013599-435|AAM68903.1| 1196|Drosophila melanogaster CG2146-PB,...    27   7.5  
AE013599-434|AAF59241.2| 1792|Drosophila melanogaster CG2146-PA,...    27   7.5  
AE013599-433|AAM68902.1| 1800|Drosophila melanogaster CG2146-PC,...    27   7.5  

>Y08160-1|CAA69352.1| 1745|Drosophila melanogaster dilute class
           unconventional myosin protein.
          Length = 1745

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 138 FQSGFFSMIYINVNGFQTKNKSQIRIQLSAVLFESD 245
           F   F   +  +VNGF  KN+  +  +L+ VL ES+
Sbjct: 511 FIKHFSDTVEYDVNGFLEKNRDTVSKELTQVLSESN 546


>BT010003-1|AAQ22472.1| 1401|Drosophila melanogaster RE30195p
           protein.
          Length = 1401

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 138 FQSGFFSMIYINVNGFQTKNKSQIRIQLSAVLFESD 245
           F   F   +  +VNGF  KN+  +  +L+ VL ES+
Sbjct: 558 FIKHFSDTVEYDVNGFLEKNRDTVSKELTQVLSESN 593


>AF003826-1|AAC99496.1| 1792|Drosophila melanogaster myosin V
           protein.
          Length = 1792

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 138 FQSGFFSMIYINVNGFQTKNKSQIRIQLSAVLFESD 245
           F   F   +  +VNGF  KN+  +  +L+ VL ES+
Sbjct: 558 FIKHFSDTVEYDVNGFLEKNRDTVSKELTQVLSESN 593


>AE013599-435|AAM68903.1| 1196|Drosophila melanogaster CG2146-PB,
           isoform B protein.
          Length = 1196

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 138 FQSGFFSMIYINVNGFQTKNKSQIRIQLSAVLFESD 245
           F   F   +  +VNGF  KN+  +  +L+ VL ES+
Sbjct: 558 FIKHFSDTVEYDVNGFLEKNRDTVSKELTQVLSESN 593


>AE013599-434|AAF59241.2| 1792|Drosophila melanogaster CG2146-PA,
           isoform A protein.
          Length = 1792

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 138 FQSGFFSMIYINVNGFQTKNKSQIRIQLSAVLFESD 245
           F   F   +  +VNGF  KN+  +  +L+ VL ES+
Sbjct: 558 FIKHFSDTVEYDVNGFLEKNRDTVSKELTQVLSESN 593


>AE013599-433|AAM68902.1| 1800|Drosophila melanogaster CG2146-PC,
           isoform C protein.
          Length = 1800

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 138 FQSGFFSMIYINVNGFQTKNKSQIRIQLSAVLFESD 245
           F   F   +  +VNGF  KN+  +  +L+ VL ES+
Sbjct: 558 FIKHFSDTVEYDVNGFLEKNRDTVSKELTQVLSESN 593


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,201,673
Number of Sequences: 53049
Number of extensions: 204579
Number of successful extensions: 279
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 279
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 943048980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)