Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11g12
         (636 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    25   2.0  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    25   2.7  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    24   3.5  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            24   4.6  
AB107248-1|BAE72063.1|  278|Anopheles gambiae Bcl-2 family prote...    23   6.1  

>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative
           5-oxoprolinase protein.
          Length = 1344

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -3

Query: 229 VHLAIFRSRIGYQLRLGNSLLYTASVLLTKDP 134
           VHL   +  + YQLR     L    VLL+  P
Sbjct: 820 VHLGAMQETVQYQLRRRGGTLKPGDVLLSNHP 851


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +1

Query: 367 GEGGSRKS*ERKRGVTARRETRNTFELQQQR 459
           G+GG+R++  RKR    RR  R   + QQQ+
Sbjct: 164 GQGGNRET-ARKRQQRLRRRERERQQQQQQQ 193


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -2

Query: 239 APFCTLSDIQVENWLSVTSWELVA 168
           A +C L  I V+N  +  SWE +A
Sbjct: 597 ARYCALITIDVKNAFNSASWEEIA 620


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 14/58 (24%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
 Frame = -1

Query: 600  NASAAHAIIAVQ-MATRVCMESKKKNMISSATDEPRGKHSACIVFNVCTLLLELEGVA 430
            N S  H+ +      TRV   ++  N +++   +PRG       ++     L L G+A
Sbjct: 1231 NISLTHSNVRNSYQLTRVAPSNRTNNQLTAQHQDPRGPQGRSTDYHATQQPLPLPGLA 1288


>AB107248-1|BAE72063.1|  278|Anopheles gambiae Bcl-2 family protein
           Anob-1 protein.
          Length = 278

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -2

Query: 245 PPAPFCTLSDIQVENWLSVTSWELVAVYRLS 153
           PP P     +I V  W+S+T+  L  +Y +S
Sbjct: 235 PPQP-----EISVTGWVSITALTLAVIYIVS 260


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 556,814
Number of Sequences: 2352
Number of extensions: 10414
Number of successful extensions: 22
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)