Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11g12
         (636 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-3868|AAN14064.1|  417|Drosophila melanogaster CG17370-P...   106   3e-23
AE014297-3867|AAF56522.1|  417|Drosophila melanogaster CG17370-P...   106   3e-23
AE014297-3866|AAF56521.1|  417|Drosophila melanogaster CG17370-P...   106   3e-23
BT003288-1|AAO25047.1|  422|Drosophila melanogaster GM06145p pro...   103   3e-22
AE014297-758|AAF54244.2|  390|Drosophila melanogaster CG11735-PA...    29   4.0  

>AE014297-3868|AAN14064.1|  417|Drosophila melanogaster CG17370-PC,
           isoform C protein.
          Length = 417

 Score =  106 bits (254), Expect = 3e-23
 Identities = 60/128 (46%), Positives = 73/128 (57%), Gaps = 4/128 (3%)
 Frame = +2

Query: 257 EYQEYKWAYS-IMDSSKVSACLISMLLIVYGSFRSLNMXXXXXXXXXXXXXXS---LLGG 424
           EY+E  W  S +MDSS+VS CLISMLLIVYGSFRSLN+              S   LL G
Sbjct: 31  EYRELHWTVSSVMDSSRVSTCLISMLLIVYGSFRSLNIEQEAREREQKKRNESMTNLLTG 90

Query: 425 KPATPSSSNNNVQTLNTMQALCFPLGSSVALLIMFFFFDSMQXXXXXXXXXXXXXXXXXX 604
           +P     ++    TL+TM ALC PLG+S++LLIMFFFFDSMQ                  
Sbjct: 91  EPVEKEPTDK-FATLDTMHALCLPLGASISLLIMFFFFDSMQLLFAVCTAIIATVALAFL 149

Query: 605 XXPLCQYV 628
             P+CQY+
Sbjct: 150 LLPMCQYI 157


>AE014297-3867|AAF56522.1|  417|Drosophila melanogaster CG17370-PB,
           isoform B protein.
          Length = 417

 Score =  106 bits (254), Expect = 3e-23
 Identities = 60/128 (46%), Positives = 73/128 (57%), Gaps = 4/128 (3%)
 Frame = +2

Query: 257 EYQEYKWAYS-IMDSSKVSACLISMLLIVYGSFRSLNMXXXXXXXXXXXXXXS---LLGG 424
           EY+E  W  S +MDSS+VS CLISMLLIVYGSFRSLN+              S   LL G
Sbjct: 31  EYRELHWTVSSVMDSSRVSTCLISMLLIVYGSFRSLNIEQEAREREQKKRNESMTNLLTG 90

Query: 425 KPATPSSSNNNVQTLNTMQALCFPLGSSVALLIMFFFFDSMQXXXXXXXXXXXXXXXXXX 604
           +P     ++    TL+TM ALC PLG+S++LLIMFFFFDSMQ                  
Sbjct: 91  EPVEKEPTDK-FATLDTMHALCLPLGASISLLIMFFFFDSMQLLFAVCTAIIATVALAFL 149

Query: 605 XXPLCQYV 628
             P+CQY+
Sbjct: 150 LLPMCQYI 157


>AE014297-3866|AAF56521.1|  417|Drosophila melanogaster CG17370-PA,
           isoform A protein.
          Length = 417

 Score =  106 bits (254), Expect = 3e-23
 Identities = 60/128 (46%), Positives = 73/128 (57%), Gaps = 4/128 (3%)
 Frame = +2

Query: 257 EYQEYKWAYS-IMDSSKVSACLISMLLIVYGSFRSLNMXXXXXXXXXXXXXXS---LLGG 424
           EY+E  W  S +MDSS+VS CLISMLLIVYGSFRSLN+              S   LL G
Sbjct: 31  EYRELHWTVSSVMDSSRVSTCLISMLLIVYGSFRSLNIEQEAREREQKKRNESMTNLLTG 90

Query: 425 KPATPSSSNNNVQTLNTMQALCFPLGSSVALLIMFFFFDSMQXXXXXXXXXXXXXXXXXX 604
           +P     ++    TL+TM ALC PLG+S++LLIMFFFFDSMQ                  
Sbjct: 91  EPVEKEPTDK-FATLDTMHALCLPLGASISLLIMFFFFDSMQLLFAVCTAIIATVALAFL 149

Query: 605 XXPLCQYV 628
             P+CQY+
Sbjct: 150 LLPMCQYI 157


>BT003288-1|AAO25047.1|  422|Drosophila melanogaster GM06145p
           protein.
          Length = 422

 Score =  103 bits (246), Expect = 3e-22
 Identities = 60/132 (45%), Positives = 73/132 (55%), Gaps = 8/132 (6%)
 Frame = +2

Query: 257 EYQEYKWAYS-IMDSSKVSACLISMLLIVYGSFRSLNMXXXXXXXXXXXXXXS---LLGG 424
           EY+E  W  S +MDSS+VS CLISMLLIVYGSFRSLN+              S   LL G
Sbjct: 31  EYRELHWTVSSVMDSSRVSTCLISMLLIVYGSFRSLNIEQEAREREQKKRNESMTNLLTG 90

Query: 425 KPATPSSS----NNNVQTLNTMQALCFPLGSSVALLIMFFFFDSMQXXXXXXXXXXXXXX 592
           +P     +     +   TL+TM ALC PLG+S++LLIMFFFFDSMQ              
Sbjct: 91  EPVEKEPNLYFTADKFATLDTMHALCLPLGASISLLIMFFFFDSMQLLFAVCTAIIATVA 150

Query: 593 XXXXXXPLCQYV 628
                 P+CQY+
Sbjct: 151 LAFLLLPMCQYI 162


>AE014297-758|AAF54244.2|  390|Drosophila melanogaster CG11735-PA
           protein.
          Length = 390

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -3

Query: 112 RTYTNTDFDTLK*LIFTLIFFSNNIRLSVLNRLDS 8
           R YTN +   +  LIF ++F+SN I LS +   +S
Sbjct: 18  RPYTNGEESKMNKLIFHIVFWSNVINLSFVGLFES 52


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,409,952
Number of Sequences: 53049
Number of extensions: 456382
Number of successful extensions: 1236
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1232
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2662347150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)