Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11g11
(688 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0283 - 2095291-2095566,2095962-2096348,2096523-2096881,209... 31 0.65
12_02_1012 - 25281820-25281987,25282337-25282409,25283370-252834... 31 1.1
05_01_0062 + 440239-440325,441107-441183,441416-441643,441953-44... 30 1.5
01_01_0911 - 7176355-7176372,7176502-7176756,7177352-7177615,717... 29 2.6
12_01_0287 - 2152179-2152424,2153300-2153339,2153612-2153831,215... 29 3.5
03_05_0549 - 25444234-25446792 29 3.5
02_05_1291 - 35516715-35517251,35517339-35518185,35518480-355190... 29 3.5
11_06_0764 + 27108979-27110018,27110176-27112270 29 4.6
10_08_0849 + 21040043-21040199,21040620-21040678,21040925-210424... 29 4.6
08_01_0540 + 4691929-4692014,4692915-4693125,4693756-4693885,469... 29 4.6
04_01_0399 - 5214183-5214206,5215437-5215502,5219537-5219635,521... 29 4.6
03_05_1082 - 30239385-30239561,30239937-30240009,30240382-302404... 29 4.6
02_05_0257 - 27206834-27207028,27207596-27208051 29 4.6
03_05_0351 - 23382786-23382821,23383373-23383634,23384369-233856... 28 6.0
>11_01_0283 -
2095291-2095566,2095962-2096348,2096523-2096881,
2097275-2097398,2097480-2097548,2098536-2098584,
2099185-2099299,2099823-2099872,2099969-2100106,
2101136-2101197,2102066-2102180,2103433-2103664,
2103748-2103826,2103925-2103993,2104079-2104171,
2104577-2104622,2105223-2105268,2105354-2105411,
2105577-2105615,2105712-2105783,2105930-2106021,
2106824-2106923
Length = 889
Score = 31.5 bits (68), Expect = 0.65
Identities = 23/70 (32%), Positives = 33/70 (47%)
Frame = +2
Query: 320 ELKTRYESGLQSVSSSGLTENLNESDIAIVQTNEQFLDPITKKHISDPVKNTMCGHVYER 499
EL R + Q +S LT+ E ++A+ TN+ DP I+DP K GHV
Sbjct: 200 ELAERQQKLAQMLSR--LTKIAEEFNVAVYITNQVIADPGGGMFITDP-KKPAGGHVLAH 256
Query: 500 ETILNLIRRK 529
+ L+ RK
Sbjct: 257 AATIRLMLRK 266
>12_02_1012 -
25281820-25281987,25282337-25282409,25283370-25283420,
25283523-25283932,25284083-25284413,25285340-25285439,
25287091-25287370
Length = 470
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Frame = +2
Query: 434 PITKKHISDPVKNTMCGHVYERETILNLIRRKHRIRCPVA----GCANPESIQENHLLED 601
P+ ++ + D + C H + R+ I I + CPV GCA E ++ +H ++D
Sbjct: 75 PLCRRILRDATTVSECLHTFCRKCIYKKINDEELEHCPVCKIDLGCAPLEKLRADHNIQD 134
>05_01_0062 +
440239-440325,441107-441183,441416-441643,441953-442176,
442250-442398,443102-443279,443348-443428,443523-443669,
443759-444483
Length = 631
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = +2
Query: 389 ESDIAIVQTNEQFLDPITKKHISDPVKNTMCGHVYERETILNLIRRKHRIRCPVAGCANP 568
+S +A V T+ Q D +HI V + + +++ LN++RRKH+ V P
Sbjct: 551 KSGVASVSTSPQSFDD---EHIEADVSERLVNLLAQQQEELNVLRRKHKADIEVILKGVP 607
Query: 569 ESIQENHL 592
E +E L
Sbjct: 608 EEHREETL 615
>01_01_0911 -
7176355-7176372,7176502-7176756,7177352-7177615,
7177691-7177810,7177910-7178041,7178136-7178252,
7178335-7178459,7178611-7178920,7179368-7179550,
7179643-7179787,7180126-7181355,7181454-7181563,
7181768-7182037,7182130-7182963
Length = 1370
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +2
Query: 404 IVQTNEQFLDPITKKHISDPVKNTMCGHVYERETILNLIRRKHRIRCPV 550
+V T + F+ PIT + DPV G YER I + R + CP+
Sbjct: 421 VVATPKDFVCPITSQVFDDPV-TLETGQTYERRAIQEWLDRGN-ATCPI 467
>12_01_0287 -
2152179-2152424,2153300-2153339,2153612-2153831,
2153917-2153995,2154087-2154155,2154237-2154329,
2154411-2154477,2154579-2154640,2154729-2154774,
2155359-2155404,2155490-2155547,2155717-2155755,
2155849-2155920,2156067-2156158,2157036-2157135
Length = 442
Score = 29.1 bits (62), Expect = 3.5
Identities = 22/70 (31%), Positives = 33/70 (47%)
Frame = +2
Query: 320 ELKTRYESGLQSVSSSGLTENLNESDIAIVQTNEQFLDPITKKHISDPVKNTMCGHVYER 499
EL R + Q +S LT+ E ++A+ TN+ DP I+D +K GHV
Sbjct: 243 ELAERQQKLAQMLSR--LTKIAEEFNVAVYITNQVIADPGGGMFITD-LKKPAGGHVLAH 299
Query: 500 ETILNLIRRK 529
+ L+ RK
Sbjct: 300 AATIRLMLRK 309
>03_05_0549 - 25444234-25446792
Length = 852
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +2
Query: 419 EQFLDPITKKHISDPVKNTMCGHVYERETILNLIR 523
E F+ P+TK+ + DPV G +ERE IL R
Sbjct: 16 EAFVCPLTKQVMRDPV-TIETGQTFEREAILKWFR 49
>02_05_1291 -
35516715-35517251,35517339-35518185,35518480-35519009,
35519092-35519529
Length = 783
Score = 29.1 bits (62), Expect = 3.5
Identities = 25/86 (29%), Positives = 39/86 (45%)
Frame = +2
Query: 380 NLNESDIAIVQTNEQFLDPITKKHISDPVKNTMCGHVYERETILNLIRRKHRIRCPVAGC 559
NL + I Q N+ FL I +HI + N +Y+R+ + +I+ VA
Sbjct: 696 NLTKLTIYGFQPNDNFLGYI--RHIMEAAVNLEDVSLYDRKVLECCEDLDPKIK--VAST 751
Query: 560 ANPESIQENHLLEDEELRFRLSLSQH 637
PE+IQE LL+ + + S H
Sbjct: 752 GYPEAIQEQELLKKQITEGSVMASPH 777
>11_06_0764 + 27108979-27110018,27110176-27112270
Length = 1044
Score = 28.7 bits (61), Expect = 4.6
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = +2
Query: 8 KFEIMADIDIRDLRKQCIQSLISTAENVAKYLQEDKEDNYEKLKMYME 151
+FE + I+I + ++ + AE + K+L D +DN EK K++++
Sbjct: 992 EFEGLFGIEILENLREVHLKVSDGAEAITKFLVSDLKDNTEKPKVFVD 1039
>10_08_0849 +
21040043-21040199,21040620-21040678,21040925-21042494,
21042583-21042710,21042793-21043033,21043160-21043710
Length = 901
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +2
Query: 329 TRYESGLQ-SVSSSGLTENLNESDIAIVQTNEQFLDPITKKHISDPVKNT 475
+ +++G++ S SS +N ++S+I+ T KKH++D +KNT
Sbjct: 447 SNFKNGIKPSASSKQKQQNDSQSEISDHTTGASIFYEKAKKHLADMLKNT 496
>08_01_0540 + 4691929-4692014,4692915-4693125,4693756-4693885,
4695422-4696072,4696179-4696395,4697040-4697111,
4697167-4697257,4697367-4698363,4698914-4699044,
4699584-4699802,4700110-4700805,4700912-4701121,
4701606-4701710
Length = 1271
Score = 28.7 bits (61), Expect = 4.6
Identities = 13/54 (24%), Positives = 25/54 (46%)
Frame = +2
Query: 404 IVQTNEQFLDPITKKHISDPVKNTMCGHVYERETILNLIRRKHRIRCPVAGCAN 565
++Q++ + ++ + + TMCGHV+ + I I + CP C N
Sbjct: 985 VIQSSFAIFGLLLRQDVPEDAVVTMCGHVFCYQCIYERITTDENM-CPSPNCGN 1037
>04_01_0399 -
5214183-5214206,5215437-5215502,5219537-5219635,
5219746-5219817,5219918-5220491,5220575-5220687,
5220842-5220941,5221059-5221181,5221268-5221335,
5221461-5221610,5221715-5221858,5222097-5222288,
5222710-5222794,5222892-5223043,5223138-5223296,
5223552-5223605,5223698-5223836,5223955-5224088,
5224200-5225117
Length = 1121
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +2
Query: 209 KADTN-ISNINTLQERFEDGLKTLSQNRINPNSHRYMQELKTRYESG 346
+ADT ++++ L +RF DG++ S R P S Y++E+ G
Sbjct: 845 RADTQKYTDLDELAQRFLDGVQRDSARRSAPPSQAYVEEVVEEIRQG 891
>03_05_1082 -
30239385-30239561,30239937-30240009,30240382-30240432,
30240521-30240978,30241099-30241435,30241836-30241935,
30243880-30244003
Length = 439
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = +2
Query: 434 PITKKHISDPVKNTMCGHVYERETILNLIRRKHRIRCPVA----GCANPESIQENHLLED 601
P+ K + + T C H + +E I+ I + CPV GC E ++ +H ++D
Sbjct: 23 PLCKGLLREATAITECLHTFCKECIMEKIDDEEVDHCPVCNIDLGCDPEEKLRPDHNVQD 82
>02_05_0257 - 27206834-27207028,27207596-27208051
Length = 216
Score = 28.7 bits (61), Expect = 4.6
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +2
Query: 257 EDGLKTLSQNRINPNSHRYMQELKTRYESGLQSVSSSG--LTENLNESDIAIVQTNEQFL 430
EDG++ N++ + R E + + + S G L +NL E D + + ++ L
Sbjct: 125 EDGIEYEGMNKLRLLARRQETENMALIKIACEKIFSFGCSLPQNLLEEDKDLAKQQQELL 184
Query: 431 DPITKKH 451
D I KK+
Sbjct: 185 DGIYKKY 191
>03_05_0351 - 23382786-23382821,23383373-23383634,23384369-23385675,
23385776-23386290,23386379-23386741,23386916-23387284,
23387365-23388057,23388152-23388238,23388354-23388612
Length = 1296
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 371 LTENLNESDIAIVQTNEQFLDPITKKHISDPVKNTMCGHVYER 499
L++ LN+ AI+ T +F+D I K I + M H ++R
Sbjct: 1189 LSDQLNDEQRAILSTRNEFVDRINMKMIERFRGDVMTYHSFDR 1231
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,803,939
Number of Sequences: 37544
Number of extensions: 299234
Number of successful extensions: 728
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 728
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1744894544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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