Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11g11
         (688 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    23   2.7  
DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex det...    22   6.3  
DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex det...    22   6.3  
DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex det...    22   6.3  
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    22   6.3  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    22   6.3  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    22   6.3  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   8.3  

>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = +2

Query: 8   KFEIMADIDIR-DLRKQCIQSLISTAENVAKYLQEDKEDNYEKLKMYM 148
           KF+ + + D + DLR +  +  +      A  +Q+++E  YEKLK  M
Sbjct: 14  KFKQLRNEDNKIDLRSRTKEERLQYRRE-AWLVQQEREQEYEKLKRKM 60


>DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 290 INPNSHRYMQELKTRYES 343
           I PN++R+   L  R+ES
Sbjct: 157 IPPNAYRFRPSLNPRFES 174


>DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 290 INPNSHRYMQELKTRYES 343
           I PN++R+   L  R+ES
Sbjct: 157 IPPNAYRFRPSLNPRFES 174


>DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 290 INPNSHRYMQELKTRYES 343
           I PN++R+   L  R+ES
Sbjct: 157 IPPNAYRFRPSLNPRFES 174


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 107 LANI*RHFPQSRLSFEY 57
           LAN+ R+FP   L+F +
Sbjct: 77  LANVIRYFPTQALNFAF 93


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 290 INPNSHRYMQELKTRYES 343
           I PN++R+   L  R+ES
Sbjct: 390 IPPNAYRFRPSLNPRFES 407


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 107 LANI*RHFPQSRLSFEY 57
           LAN+ R+FP   L+F +
Sbjct: 77  LANVIRYFPTQALNFAF 93


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 138 RCTWKTTAYWK*NKK 182
           +CTW  T+Y + N K
Sbjct: 69  KCTWTITSYHRINLK 83


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,644
Number of Sequences: 438
Number of extensions: 3404
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)