Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11g10
(702 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81568-7|CAD18874.1| 497|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z92831-6|CAB07365.2| 355|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z92777-12|CAJ58496.1| 355|Caenorhabditis elegans Hypothetical p... 29 2.4
Z81516-6|CAB04206.1| 524|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z75535-5|CAA99829.1| 524|Caenorhabditis elegans Hypothetical pr... 29 4.3
U97592-1|AAB52871.3| 638|Caenorhabditis elegans Temporarily ass... 28 5.6
Z49126-3|CAA88941.2| 374|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z54284-5|CAA91062.1| 444|Caenorhabditis elegans Hypothetical pr... 27 9.8
AF026215-9|AAB71318.2| 319|Caenorhabditis elegans Hypothetical ... 27 9.8
>Z81568-7|CAD18874.1| 497|Caenorhabditis elegans Hypothetical
protein K08E3.5d protein.
Length = 497
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +3
Query: 375 ESCLRPFPPAFMKSGIKDMDELLSVITDVPALDLVLQQLDNL 500
E +RP+ G K ++SV D+ LDL +QQ+ L
Sbjct: 98 EGAIRPYKSLGTSMGCKGPKSVISVRNDLTFLDLTMQQIQTL 139
>Z92831-6|CAB07365.2| 355|Caenorhabditis elegans Hypothetical
protein F22G12.1 protein.
Length = 355
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = +3
Query: 159 IHKMEREHEVLSETGTNCNIASVSETMSDINQTKLDTLEKK 281
+ ++E++ E L + T ++ + ETM +N+TK + ++KK
Sbjct: 108 VREIEQQREALEKQRTE-DLVNHQETMRKLNETKFEAIKKK 147
>Z92777-12|CAJ58496.1| 355|Caenorhabditis elegans Hypothetical
protein F22G12.1 protein.
Length = 355
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = +3
Query: 159 IHKMEREHEVLSETGTNCNIASVSETMSDINQTKLDTLEKK 281
+ ++E++ E L + T ++ + ETM +N+TK + ++KK
Sbjct: 108 VREIEQQREALEKQRTE-DLVNHQETMRKLNETKFEAIKKK 147
>Z81516-6|CAB04206.1| 524|Caenorhabditis elegans Hypothetical
protein F26H9.1 protein.
Length = 524
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +3
Query: 381 CLRPFPPAFMKSG--IKDMDELLSVITDVPALDLVLQQLDNLEAL 509
CL+ F +SG I + +++ T+ P D+VL+Q+D++ A+
Sbjct: 204 CLKSFMTLAYESGALIAGLGKMIHAFTNRPDEDIVLEQIDDIVAM 248
>Z75535-5|CAA99829.1| 524|Caenorhabditis elegans Hypothetical
protein F26H9.1 protein.
Length = 524
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +3
Query: 381 CLRPFPPAFMKSG--IKDMDELLSVITDVPALDLVLQQLDNLEAL 509
CL+ F +SG I + +++ T+ P D+VL+Q+D++ A+
Sbjct: 204 CLKSFMTLAYESGALIAGLGKMIHAFTNRPDEDIVLEQIDDIVAM 248
>U97592-1|AAB52871.3| 638|Caenorhabditis elegans Temporarily
assigned gene nameprotein 150, isoform b protein.
Length = 638
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 195 ETGTNCNIASVSETMSDINQTKLDTLEKKAVHLRLVLEK 311
E GTN NI + +T S +NQ L T + + L L+ E+
Sbjct: 133 EEGTNLNIEFLKDTTSPMNQLLLLTTIETSTLLNLIEER 171
>Z49126-3|CAA88941.2| 374|Caenorhabditis elegans Hypothetical
protein DH11.4 protein.
Length = 374
Score = 27.9 bits (59), Expect = 7.4
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +3
Query: 426 DMDELLSVITDVPALDLVLQQLDNLEALP-NISDIIDLLFYVLVRLKEPTLKTV-PTDVH 599
D+ ELL+++T P + V + +ALP N + ++ + RL E TV P+ VH
Sbjct: 217 DVCELLTILTYAPTVQFVTTTVKKAKALPYNNAPFARIMLFEGRRLMEQKQTTVNPSLVH 276
Query: 600 E 602
+
Sbjct: 277 K 277
>Z54284-5|CAA91062.1| 444|Caenorhabditis elegans Hypothetical
protein D2085.6 protein.
Length = 444
Score = 27.5 bits (58), Expect = 9.8
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +3
Query: 510 PNISDIIDLLFYVLVRLKEPTLKTVPTDVHEQILAMANTMTTPSKPQHIFQVISSNKSTV 689
P D++D L + R +E L PT+ HE + M N ++ Q I+Q ++ T
Sbjct: 328 PVPDDLVDALLKAVDR-REKGLLMDPTEKHEAVSKMYNWPDVAARTQVIYQKAVESEPTG 386
Query: 690 EL 695
L
Sbjct: 387 RL 388
>AF026215-9|AAB71318.2| 319|Caenorhabditis elegans Hypothetical
protein F09G2.2 protein.
Length = 319
Score = 27.5 bits (58), Expect = 9.8
Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 7/101 (6%)
Frame = +3
Query: 411 KSGIKDMDELLSVITDVPALDLVLQQLDNLEALPNISDI-IDLLFYVLVRLKEPTLK--- 578
K+G +ELL + + VP +D+V Q ++ + + I + + L+ L + EP+
Sbjct: 172 KNGFMTYNELLQLSSMVPIMDIVKQLIEFISSTSLIYCLTLALMSTTLSTVSEPSTSADV 231
Query: 579 TVPTDVHE---QILAMANTMTTPSKPQHIFQVISSNKSTVE 692
T P D ++ + T + PS + F+ N+ TVE
Sbjct: 232 TSPKDNNQTFSPVFLSPRTRSHPSTTEFGFE-FDENEWTVE 271
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,952,783
Number of Sequences: 27780
Number of extensions: 308621
Number of successful extensions: 869
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 869
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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