Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11g10
(702 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 26 0.40
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 23 2.1
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 23 2.1
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 23 2.1
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 23 2.1
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 23 2.1
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 23 2.1
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 23 2.1
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 23 2.1
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 22 6.5
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 6.5
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 6.5
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 22 6.5
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 22 6.5
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 25.8 bits (54), Expect = 0.40
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -1
Query: 102 ILNSKKNNRLV*LYNKKFKTFHCLLNYFDTVAQP 1
I++S NN YN +K H +NY + + P
Sbjct: 314 IISSLSNNYNYNNYNNNYKPLHYNINYIEQIPVP 347
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.4 bits (48), Expect = 2.1
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = -1
Query: 102 ILNSKKNNRLV*LYNKKFKTFHCLLNYFDTVAQP 1
I++S NN YN +K + +NY + + P
Sbjct: 81 IISSLSNNYNYNNYNNNYKPLYYNINYIEQIPVP 114
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.4 bits (48), Expect = 2.1
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = -1
Query: 102 ILNSKKNNRLV*LYNKKFKTFHCLLNYFDTVAQP 1
I++S NN YN +K + +NY + + P
Sbjct: 81 IISSLSNNYNYNNYNNNYKPLYYNINYIEQIPVP 114
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.4 bits (48), Expect = 2.1
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = -1
Query: 102 ILNSKKNNRLV*LYNKKFKTFHCLLNYFDTVAQP 1
I++S NN YN +K + +NY + + P
Sbjct: 81 IISSLSNNYNYNNYNNNYKPLYYNINYIEQIPVP 114
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 23.4 bits (48), Expect = 2.1
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = -1
Query: 102 ILNSKKNNRLV*LYNKKFKTFHCLLNYFDTVAQP 1
I++S NN YN +K + +NY + + P
Sbjct: 81 IISSLSNNYNYNNYNNNYKPLYYNINYIEQIPVP 114
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.4 bits (48), Expect = 2.1
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = -1
Query: 102 ILNSKKNNRLV*LYNKKFKTFHCLLNYFDTVAQP 1
I++S NN YN +K + +NY + + P
Sbjct: 314 IISSLSNNYNYNNYNNNYKPLYYNINYIEQIPVP 347
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.4 bits (48), Expect = 2.1
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = -1
Query: 102 ILNSKKNNRLV*LYNKKFKTFHCLLNYFDTVAQP 1
I++S NN YN +K + +NY + + P
Sbjct: 314 IISSLSNNYNYNNYNNNYKPLYYNINYIEQIPVP 347
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 23.4 bits (48), Expect = 2.1
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = -1
Query: 102 ILNSKKNNRLV*LYNKKFKTFHCLLNYFDTVAQP 1
I++S NN YN +K + +NY + + P
Sbjct: 314 IISSLSNNYNYNNYNNNYKPLYYNINYIEQIPVP 347
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 23.4 bits (48), Expect = 2.1
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = -1
Query: 102 ILNSKKNNRLV*LYNKKFKTFHCLLNYFDTVAQP 1
I++S NN YN +K + +NY + + P
Sbjct: 303 IISSLSNNYNYNNYNNNYKPLYYNINYIEQIPVP 336
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 21.8 bits (44), Expect = 6.5
Identities = 13/54 (24%), Positives = 23/54 (42%)
Frame = -2
Query: 356 GCYE*TPFQISGFEVFFQNKSQMNSLFFQSVQFGLIDIRHCL*YRGYITIGTRF 195
G Y+ I G+ FQNK+ + QS + D + Y+ ++ R+
Sbjct: 381 GMYDILARDILGYNFDFQNKNNLIPSALQSYSTSMRDPAFYMLYQNILSYFLRY 434
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 6.5
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -3
Query: 628 IVFAIAKICSCTSVGTVFNVGSLSRTRT 545
++ A + + SC G +F + S RTRT
Sbjct: 6 VLQAESDVSSCVIFGVLFVLFSFLRTRT 33
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 6.5
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -3
Query: 628 IVFAIAKICSCTSVGTVFNVGSLSRTRT 545
++ A + + SC G +F + S RTRT
Sbjct: 6 VLQAESDVSSCVIFGVLFVLFSFLRTRT 33
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.8 bits (44), Expect = 6.5
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 587 NGCARTNLSDGKYYDD 634
NG T+LSDG Y+ +
Sbjct: 507 NGEVATSLSDGSYFGE 522
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.8 bits (44), Expect = 6.5
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 587 NGCARTNLSDGKYYDD 634
NG T+LSDG Y+ +
Sbjct: 475 NGEVATSLSDGSYFGE 490
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,289
Number of Sequences: 438
Number of extensions: 4151
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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