Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11g05
         (337 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9Z9G1 Cluster: Predicted OMP; n=8; Chlamydiaceae|Rep: ...    31   5.1  
UniRef50_UPI0000DB7563 Cluster: PREDICTED: similar to HECT, C2 a...    30   8.9  
UniRef50_Q8RBL7 Cluster: Sugar-binding periplasmic proteins/doma...    30   8.9  
UniRef50_Q30TL8 Cluster: Putative uncharacterized protein; n=1; ...    30   8.9  

>UniRef50_Q9Z9G1 Cluster: Predicted OMP; n=8; Chlamydiaceae|Rep:
           Predicted OMP - Chlamydia pneumoniae (Chlamydophila
           pneumoniae)
          Length = 695

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 15/34 (44%), Positives = 18/34 (52%)
 Frame = -1

Query: 181 FIGCYSGSSCGPLCNCHGWCCFILLSFFGNGFGM 80
           F+G Y G S  P+   H    F L SFF +G GM
Sbjct: 204 FLGSYLGMSYSPISRKHFSSTFFLDSFFKHGVGM 237


>UniRef50_UPI0000DB7563 Cluster: PREDICTED: similar to HECT, C2 and
           WW domain containing E3 ubiquitin protein ligase 2
           isoform 1; n=1; Apis mellifera|Rep: PREDICTED: similar
           to HECT, C2 and WW domain containing E3 ubiquitin
           protein ligase 2 isoform 1 - Apis mellifera
          Length = 1204

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +3

Query: 84  PNPLPKKLRRMKQHHP*QLQRGPQELPE*HPIK 182
           P PLP ++     H    L  GP ELP+ HP K
Sbjct: 366 PPPLPPRVTHKLLHRSNALPTGPPELPKRHPQK 398


>UniRef50_Q8RBL7 Cluster: Sugar-binding periplasmic
           proteins/domains; n=5; Clostridia|Rep: Sugar-binding
           periplasmic proteins/domains - Thermoanaerobacter
           tengcongensis
          Length = 417

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 18/48 (37%), Positives = 26/48 (54%)
 Frame = +2

Query: 5   LSRKYLKMKLLIFFGVLAFVAIELIHSKPVAEETKKDETTPPVTVTEG 148
           +SRK+L + +L  F VLA +      SK    +T   ET+ PVT+  G
Sbjct: 1   MSRKFLSIFVLTVF-VLATILAGCSSSKTPESQTPTQETSKPVTIKLG 47


>UniRef50_Q30TL8 Cluster: Putative uncharacterized protein; n=1;
           Thiomicrospira denitrificans ATCC 33889|Rep: Putative
           uncharacterized protein - Thiomicrospira denitrificans
           (strain ATCC 33889 / DSM 1351)
          Length = 74

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 2/33 (6%)
 Frame = +2

Query: 26  MKLLIFFGVLAFVAIELIHSKPVAEET--KKDE 118
           +K+L+  GV+AF+  + I  KP  E++  KKDE
Sbjct: 3   LKILLVVGVIAFIYFKFIKKKPQVEKSANKKDE 35


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 239,568,876
Number of Sequences: 1657284
Number of extensions: 3201238
Number of successful extensions: 8971
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8968
length of database: 575,637,011
effective HSP length: 87
effective length of database: 431,453,303
effective search space used: 10354879272
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)