Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11g03
         (612 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D567E7 Cluster: PREDICTED: similar to CG31025-PB...    97   3e-19
UniRef50_Q8MRN4 Cluster: GH12664p; n=5; Sophophora|Rep: GH12664p...    63   4e-09
UniRef50_Q8IHD6 Cluster: AT12234p; n=3; Sophophora|Rep: AT12234p...    62   1e-08
UniRef50_Q298X9 Cluster: GA16184-PA; n=1; Drosophila pseudoobscu...    40   0.047
UniRef50_Q9VFM5 Cluster: CG14355-PA; n=2; Sophophora|Rep: CG1435...    36   0.76 
UniRef50_Q2GUX7 Cluster: Putative uncharacterized protein; n=1; ...    33   7.1  
UniRef50_Q2J8I3 Cluster: Phage integrase; n=1; Frankia sp. CcI3|...    32   9.3  

>UniRef50_UPI0000D567E7 Cluster: PREDICTED: similar to CG31025-PB,
            isoform B; n=1; Tribolium castaneum|Rep: PREDICTED:
            similar to CG31025-PB, isoform B - Tribolium castaneum
          Length = 1307

 Score = 97.1 bits (231), Expect = 3e-19
 Identities = 54/145 (37%), Positives = 72/145 (49%), Gaps = 2/145 (1%)
 Frame = +1

Query: 184  TFGDVHPGVVIGHKPCMFLRPGLPVPAKMGWLWNAADTP--GAKPRRGWQPGVIGKSVAK 357
            T GD +PGV IGHK C+   P   VP +MGWLWN   TP    KPRRGW+PG I K VA+
Sbjct: 1073 TIGDKYPGVHIGHKECVL--PAHNVPPRMGWLWNIF-TPCLNLKPRRGWRPGAIAKIVAE 1129

Query: 358  MMTFKCPRXXXXXXXXXXXXXXXXXXXXXXXXXDSEPDEPLEPKPALKVQRKGDVFTIQV 537
             +     +                         +S     ++PKP L +++    + I +
Sbjct: 1130 RIR----KHREAQGLQMLELRDFRRGKKGGGAYESGTSINIQPKPTLHIKKHDGCYWITM 1185

Query: 538  NPLKDLTEIAPNEDPYVDCDPLVFK 612
            NPLKD   +  NE PY+DC P+ FK
Sbjct: 1186 NPLKDPHTLVENESPYMDCTPMQFK 1210


>UniRef50_Q8MRN4 Cluster: GH12664p; n=5; Sophophora|Rep: GH12664p -
           Drosophila melanogaster (Fruit fly)
          Length = 998

 Score = 63.3 bits (147), Expect = 4e-09
 Identities = 37/119 (31%), Positives = 55/119 (46%)
 Frame = +1

Query: 256 VPAKMGWLWNAADTPGAKPRRGWQPGVIGKSVAKMMTFKCPRXXXXXXXXXXXXXXXXXX 435
           VP+ MGWLW A      KP  GW+PG I +S+  +M++   +                  
Sbjct: 603 VPSHMGWLWTAHPLAN-KP--GWRPGAIRRSIRGLMSYFL-KDFPVDNVPVSKYMSYYKH 658

Query: 436 XXXXXXXDSEPDEPLEPKPALKVQRKGDVFTIQVNPLKDLTEIAPNEDPYVDCDPLVFK 612
                    E  E L   P L +++K DV+TI + PLKD   +A + +PYV   P+ F+
Sbjct: 659 KMSPMSPPGEKAEDLVQVPTLHIEKKNDVYTITLRPLKDAKTLARSANPYVRMKPVQFR 717


>UniRef50_Q8IHD6 Cluster: AT12234p; n=3; Sophophora|Rep: AT12234p -
           Drosophila melanogaster (Fruit fly)
          Length = 905

 Score = 62.1 bits (144), Expect = 1e-08
 Identities = 33/119 (27%), Positives = 53/119 (44%)
 Frame = +1

Query: 256 VPAKMGWLWNAADTPGAKPRRGWQPGVIGKSVAKMMTFKCPRXXXXXXXXXXXXXXXXXX 435
           +P  MGW+W  ++    K    W+PG I + + ++M++                      
Sbjct: 597 IPCHMGWMWTKSEMARHK---SWRPGAISRPIRQLMSY-----FLKDFPADNICLSRYHY 648

Query: 436 XXXXXXXDSEPDEPLEPKPALKVQRKGDVFTIQVNPLKDLTEIAPNEDPYVDCDPLVFK 612
                    E +EPL   P L + RKGD + I + PLKD   +A + +PY D  P+VF+
Sbjct: 649 RHKKCRRVEELEEPLVQHPTLHISRKGDEYIITLRPLKDPKALASSANPYADMKPVVFR 707


>UniRef50_Q298X9 Cluster: GA16184-PA; n=1; Drosophila
           pseudoobscura|Rep: GA16184-PA - Drosophila pseudoobscura
           (Fruit fly)
          Length = 819

 Score = 39.9 bits (89), Expect = 0.047
 Identities = 21/51 (41%), Positives = 30/51 (58%)
 Frame = +1

Query: 217 GHKPCMFLRPGLPVPAKMGWLWNAADTPGAKPRRGWQPGVIGKSVAKMMTF 369
           GHK C  L     VP + GW W   +T  A+ + GW+PGVI +S +++M F
Sbjct: 493 GHKTC--LSSDRAVPRRHGWGW--MNTDEAR-KYGWRPGVIARSTSRVMKF 538


>UniRef50_Q9VFM5 Cluster: CG14355-PA; n=2; Sophophora|Rep:
           CG14355-PA - Drosophila melanogaster (Fruit fly)
          Length = 1024

 Score = 35.9 bits (79), Expect = 0.76
 Identities = 21/50 (42%), Positives = 30/50 (60%)
 Frame = +1

Query: 220 HKPCMFLRPGLPVPAKMGWLWNAADTPGAKPRRGWQPGVIGKSVAKMMTF 369
           HK C+ LR G  V  + GW W+  ++  AK + GW+PG I K + K+M F
Sbjct: 552 HKRCV-LRSGF-VSRQHGWAWS--NSWEAK-KLGWRPGAIRKPIKKLMKF 596


>UniRef50_Q2GUX7 Cluster: Putative uncharacterized protein; n=1;
           Chaetomium globosum|Rep: Putative uncharacterized
           protein - Chaetomium globosum (Soil fungus)
          Length = 1309

 Score = 32.7 bits (71), Expect = 7.1
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = -2

Query: 335 TPGCHPRRGFAPGVSAAFHSHPILAGTGKPGLKNMHG 225
           TPG  P    A G+SAA H+ P+    G   L+  HG
Sbjct: 77  TPGSIPLTAQATGISAAAHADPVKYARGPAALQRPHG 113


>UniRef50_Q2J8I3 Cluster: Phage integrase; n=1; Frankia sp.
           CcI3|Rep: Phage integrase - Frankia sp. (strain CcI3)
          Length = 289

 Score = 32.3 bits (70), Expect = 9.3
 Identities = 25/64 (39%), Positives = 27/64 (42%), Gaps = 5/64 (7%)
 Frame = +1

Query: 205 GVVIGHKPCMFLRPGLPVPAKMGWLWNAADTPG-AKPRRGWQPGVIGKSVAK----MMTF 369
           GVV G  P +  RP  P  A  GW       PG  KP R   PG  G  V      M+TF
Sbjct: 197 GVVPGGGPSVQRRPDAPRSAASGWRPRRGGGPGRVKPVRHAPPGHGGGPVCVRRPWMLTF 256

Query: 370 KCPR 381
             PR
Sbjct: 257 PAPR 260


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 552,899,569
Number of Sequences: 1657284
Number of extensions: 9353811
Number of successful extensions: 25501
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 24803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25489
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 43977329078
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)