Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11g03
         (612 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g77740.1 68414.m09051 1-phosphatidylinositol-4-phosphate 5-ki...    30   1.4  
At4g36730.2 68417.m05212 G-box binding factor 1 (GBF1) identical...    29   3.2  
At4g36730.1 68417.m05211 G-box binding factor 1 (GBF1) identical...    29   3.2  
At5g24460.1 68418.m02883 expressed protein                             27   9.8  
At2g26420.1 68415.m03170 1-phosphatidylinositol-4-phosphate 5-ki...    27   9.8  

>At1g77740.1 68414.m09051 1-phosphatidylinositol-4-phosphate
           5-kinase, putative / PIP kinase, putative /
           PtdIns(4)P-5-kinase, putative / diphosphoinositide
           kinase, putative strong similarity to
           phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1
           [Arabidopsis thaliana] GI:3702691; contains Pfam
           profiles PF01504: Phosphatidylinositol-4-phosphate
           5-Kinase, PF02493: MORN repeat
          Length = 754

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = +3

Query: 246 RFTGASQNGVAVECGRHSWSEAATWMAAW 332
           R+ G  +NGV    G  +W++ ++W+ +W
Sbjct: 219 RYEGQWENGVPKGSGVFTWADGSSWIGSW 247


>At4g36730.2 68417.m05212 G-box binding factor 1 (GBF1) identical to
           G-box binding factor 1 SP:P42774 from [Arabidopsis
           thaliana]; contains Pfam profile: PF00170 bZIP
           transcription factor
          Length = 313

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -3

Query: 514 PFSVLLKLASVREVHPAPNPLLQSQHQAYY 425
           PF      +S +EV P P P  Q+  QAYY
Sbjct: 9   PFKTTKPTSSAQEVPPTPYPDWQNSMQAYY 38


>At4g36730.1 68417.m05211 G-box binding factor 1 (GBF1) identical to
           G-box binding factor 1 SP:P42774 from [Arabidopsis
           thaliana]; contains Pfam profile: PF00170 bZIP
           transcription factor
          Length = 315

 Score = 28.7 bits (61), Expect = 3.2
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -3

Query: 514 PFSVLLKLASVREVHPAPNPLLQSQHQAYY 425
           PF      +S +EV P P P  Q+  QAYY
Sbjct: 9   PFKTTKPTSSAQEVPPTPYPDWQNSMQAYY 38


>At5g24460.1 68418.m02883 expressed protein
          Length = 300

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -2

Query: 251 KPGLKNMHGLWPMTTPG*TS 192
           KPG KN+H LW   + G TS
Sbjct: 113 KPGTKNVHNLWLELSDGETS 132


>At2g26420.1 68415.m03170 1-phosphatidylinositol-4-phosphate
           5-kinase, putative / PIP kinase, putative /
           PtdIns(4)P-5-kinase, putative / diphosphoinositide
           kinase, putative similar to
           phosphatidylinositol-4-phosphate 5-kinase AtPIP5K1
           [Arabidopsis thaliana] GI:3702691; contains Pfam
           profiles PF01504: Phosphatidylinositol-4-phosphate
           5-Kinase, PF02493: MORN repeat
          Length = 705

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = +3

Query: 246 RFTGASQNGVAVECGRHSWSEAATWMAAWGHW*KRCENDDV 368
           R+ G  +NG  V  G  SW E  T    WG   K+ + + V
Sbjct: 195 RYDGLWENGAPVGKGVLSWGEEKTSYNGWGRKSKKKDEEIV 235


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,841,011
Number of Sequences: 28952
Number of extensions: 199895
Number of successful extensions: 514
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 514
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1226538000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)