Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11g01
         (740 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    26   0.28 
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    25   0.49 
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    24   1.1  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   2.6  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   6.0  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   7.9  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 26.2 bits (55), Expect = 0.28
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +2

Query: 641 LDASLLFSCIILIFNTYTSXFLFSYFLTNFIYP 739
           +D S++F C  L+ +T    F     L  FI+P
Sbjct: 217 VDGSIVFVCFSLVEDTLPCVFFLGSILIFFIFP 249


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -2

Query: 292 CPCTHSSSVQTPSTSGILCLEEKQQPEL 209
           C CTH   +   +   I+ ++E QQP L
Sbjct: 566 CMCTHKVDIPLNAIVEIVLVDEVQQPNL 593


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = +1

Query: 316 SRTRIMHKNLKAKEEGQCSNGSCKI 390
           ++TR++H++L A+    C N + K+
Sbjct: 609 AKTRVVHRDLAARNVLVCENHTVKV 633


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = -2

Query: 292 CPCTHSSSVQTPSTSGILCLEEKQQPEL 209
           C CTH   +   +   ++ ++E Q P L
Sbjct: 566 CMCTHQVDIPLNAIVEVVLVDEVQSPNL 593


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = -2

Query: 604 ALKRISTLTFSCLNRCQIQNHCCSLNQTRS 515
           A KR+STL+   +    + N+ C  + + S
Sbjct: 656 ASKRVSTLSIDNVQSTHVGNYTCLASNSAS 685


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +2

Query: 260 SLDTGAMSARANARS*FVLHVHESCIRI*KPKKKVNAA 373
           S+D GA+ A   ++   +L   E C+++  P+K   AA
Sbjct: 311 SID-GALEAGPYSKEEGLLSYPEVCVKLANPQKLTTAA 347


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,391
Number of Sequences: 336
Number of extensions: 2645
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)