Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11f19
(683 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 294 2e-79
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 294 2e-79
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 294 2e-79
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 294 2e-79
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 294 2e-79
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 294 2e-79
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 292 7e-79
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 192 1e-48
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 167 4e-41
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 70 7e-12
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 294 bits (722), Expect = 2e-79
Identities = 134/189 (70%), Positives = 152/189 (80%)
Frame = +2
Query: 56 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 235
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 236 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 415
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 416 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 595
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 596 PGYDAESKK 622
PGYD+ESK+
Sbjct: 181 PGYDSESKE 189
Score = 37.1 bits (82), Expect = 0.058
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +3
Query: 618 KKFNAEVHRAHIFGLHVAEYM 680
K+FNAEVHR HI G +VA+YM
Sbjct: 188 KEFNAEVHRKHIMGQNVADYM 208
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 294 bits (722), Expect = 2e-79
Identities = 134/189 (70%), Positives = 152/189 (80%)
Frame = +2
Query: 56 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 235
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 236 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 415
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 416 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 595
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 596 PGYDAESKK 622
PGYD+ESK+
Sbjct: 181 PGYDSESKE 189
Score = 37.1 bits (82), Expect = 0.058
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +3
Query: 618 KKFNAEVHRAHIFGLHVAEYM 680
K+FNAEVHR HI G +VA+YM
Sbjct: 188 KEFNAEVHRKHIMGQNVADYM 208
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 294 bits (722), Expect = 2e-79
Identities = 134/189 (70%), Positives = 152/189 (80%)
Frame = +2
Query: 56 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 235
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 236 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 415
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 416 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 595
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 596 PGYDAESKK 622
PGYD+ESK+
Sbjct: 181 PGYDSESKE 189
Score = 37.1 bits (82), Expect = 0.058
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +3
Query: 618 KKFNAEVHRAHIFGLHVAEYM 680
K+FNAEVHR HI G +VA+YM
Sbjct: 188 KEFNAEVHRKHIMGQNVADYM 208
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 294 bits (722), Expect = 2e-79
Identities = 134/189 (70%), Positives = 152/189 (80%)
Frame = +2
Query: 56 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 235
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 236 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 415
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 416 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 595
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 596 PGYDAESKK 622
PGYD+ESK+
Sbjct: 181 PGYDSESKE 189
Score = 37.1 bits (82), Expect = 0.058
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +3
Query: 618 KKFNAEVHRAHIFGLHVAEYM 680
K+FNAEVHR HI G +VA+YM
Sbjct: 188 KEFNAEVHRKHIMGQNVADYM 208
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 294 bits (722), Expect = 2e-79
Identities = 134/189 (70%), Positives = 152/189 (80%)
Frame = +2
Query: 56 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 235
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 236 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 415
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 416 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 595
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 596 PGYDAESKK 622
PGYD+ESK+
Sbjct: 181 PGYDSESKE 189
Score = 37.1 bits (82), Expect = 0.058
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +3
Query: 618 KKFNAEVHRAHIFGLHVAEYM 680
K+FNAEVHR HI G +VA+YM
Sbjct: 188 KEFNAEVHRKHIMGQNVADYM 208
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 294 bits (722), Expect = 2e-79
Identities = 134/189 (70%), Positives = 152/189 (80%)
Frame = +2
Query: 56 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 235
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 8 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 67
Query: 236 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 415
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 68 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 127
Query: 416 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 595
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRF
Sbjct: 128 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 187
Query: 596 PGYDAESKK 622
PGYD+ESK+
Sbjct: 188 PGYDSESKE 196
Score = 37.1 bits (82), Expect = 0.058
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +3
Query: 618 KKFNAEVHRAHIFGLHVAEYM 680
K+FNAEVHR HI G +VA+YM
Sbjct: 195 KEFNAEVHRKHIMGQNVADYM 215
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 292 bits (717), Expect = 7e-79
Identities = 133/189 (70%), Positives = 151/189 (79%)
Frame = +2
Query: 56 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 235
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 236 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 415
CQ+AY+RIEGD IVCA Y+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCARYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 416 XXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 595
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 596 PGYDAESKK 622
PGYD+ESK+
Sbjct: 181 PGYDSESKE 189
Score = 37.1 bits (82), Expect = 0.058
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +3
Query: 618 KKFNAEVHRAHIFGLHVAEYM 680
K+FNAEVHR HI G +VA+YM
Sbjct: 188 KEFNAEVHRKHIMGQNVADYM 208
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 192 bits (467), Expect = 1e-48
Identities = 84/98 (85%), Positives = 95/98 (96%)
Frame = +2
Query: 56 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 235
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 236 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAA 349
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAA
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAA 98
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 167 bits (405), Expect = 4e-41
Identities = 76/125 (60%), Positives = 90/125 (72%)
Frame = +2
Query: 206 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXX 385
+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLL 60
Query: 386 XXXXXXXXXXXXXXXXXXEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGG 565
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGG
Sbjct: 61 NRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGG 120
Query: 566 LNVPH 580
L++PH
Sbjct: 121 LSIPH 125
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 70.1 bits (164), Expect = 7e-12
Identities = 29/37 (78%), Positives = 35/37 (94%)
Frame = +2
Query: 512 TTTGARVFGAMKGAVDGGLNVPHSIKRFPGYDAESKK 622
TTTG +VFGA+KGAVDGGL++PHS KRFPGYD+ESK+
Sbjct: 1 TTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKE 37
Score = 37.1 bits (82), Expect = 0.058
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = +3
Query: 618 KKFNAEVHRAHIFGLHVAEYM 680
K+FNAEVHR HI G +VA+YM
Sbjct: 36 KEFNAEVHRKHIMGQNVADYM 56
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,228,867
Number of Sequences: 237096
Number of extensions: 2179545
Number of successful extensions: 7956
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7947
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -