Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11f17
(637 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g20780.1 68414.m02602 armadillo/beta-catenin repeat protein-r... 32 0.28
At1g76390.1 68414.m08877 armadillo/beta-catenin repeat family pr... 31 0.48
At5g04870.1 68418.m00510 calcium-dependent protein kinase isofor... 29 2.0
At2g34850.1 68415.m04279 NAD-dependent epimerase/dehydratase fam... 29 2.6
At3g18390.1 68416.m02339 expressed protein contains Pfam domain,... 28 4.5
At5g26860.1 68418.m03204 Lon protease homolog 2, mitochondrial a... 27 7.9
At5g09300.2 68418.m01077 2-oxoisovalerate dehydrogenase, putativ... 27 7.9
At5g09300.1 68418.m01078 2-oxoisovalerate dehydrogenase, putativ... 27 7.9
At4g04880.1 68417.m00710 adenosine/AMP deaminase family protein ... 27 7.9
At3g10330.1 68416.m01239 transcription initiation factor IIB-2 /... 27 7.9
>At1g20780.1 68414.m02602 armadillo/beta-catenin repeat
protein-related / U-box domain-containing protein low
similarity to immediate-early fungal elicitor protein
CMPG1 [Petroselinum crispum] GI:14582200; contains Pfam
profile PF04564: U-box domain
Length = 801
Score = 32.3 bits (70), Expect = 0.28
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +3
Query: 399 MFSTLRLVERVVKKQLKEGQISESLAGKFQWEKLSTRQRRERPLYHLDKFANV-RMYKNI 575
M + +E + ++ +E +S +L FQ TRQ E L H+DK N ++ NI
Sbjct: 741 MVERILRIEDIAREVAEEQSLSAALVDAFQNADFRTRQIAENALKHIDKIPNFSSIFPNI 800
Query: 576 S 578
+
Sbjct: 801 A 801
>At1g76390.1 68414.m08877 armadillo/beta-catenin repeat family
protein / U-box domain-containing protein contains Pfam
domain, PF00514: Armadillo/beta-catenin-like repeats and
Pfam, PF04564: U-box domain
Length = 811
Score = 31.5 bits (68), Expect = 0.48
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +3
Query: 399 MFSTLRLVERVVKKQLKEGQISESLAGKFQWEKLSTRQRRERPLYHLDKFAN 554
M + +E + ++ +E ++ +L FQ TRQ E+ L H+DK N
Sbjct: 751 MVERILRIEEIAREVGEEQNVTAALVDAFQNADFRTRQIAEKALRHIDKIPN 802
>At5g04870.1 68418.m00510 calcium-dependent protein kinase isoform
AK1 (AK1) identical to calcium-dependent protein kinase,
isoform AK1 (CDPK) [Arabidopsis thaliana]
SWISS-PROT:Q06850; contains protein kinase domain,
Pfam:PF00069; contains EF hand domain (calcium-binding
EF-hand), Pfam:PF00036, INTERPRO:IPR002048
Length = 610
Score = 29.5 bits (63), Expect = 2.0
Identities = 22/68 (32%), Positives = 31/68 (45%)
Frame = +3
Query: 99 ASNADKLLWILLFAGVLSYGTQCPMHEMTDAKAAYKSGEIPDSSMPITLDNIKAKLKESG 278
A N K + + + A LS + EM + A KSG+I + L + A LKES
Sbjct: 432 AMNKFKKMALRVIAESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGLKRVGANLKESE 491
Query: 279 IFDWQDAS 302
I D A+
Sbjct: 492 ILDLMQAA 499
>At2g34850.1 68415.m04279 NAD-dependent epimerase/dehydratase family
protein similar to UDP-galactose 4-epimerase from
Cyamopsis tetragonoloba GI:3021357, Lactococcus lactis
GI:3703056; contains Pfam profile PF01370 NAD dependent
epimerase/dehydratase family
Length = 236
Score = 29.1 bits (62), Expect = 2.6
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +3
Query: 255 KAKLKESGIFDWQDASLND-RERKELSKLFDAVEIMTTSRNRQPPNVQNMFSTLRLVERV 431
KAK ++ GIF+ + +E E K V+I R+ + ++S R ++
Sbjct: 140 KAKPRKVGIFNVGTGKGSSVKEFVEACKKATGVDIKVDYLERRAGDYAEVYSDPRKIKEE 199
Query: 432 VKKQLKEGQISESLAGKFQWEKL 500
+ K + ESL ++W+KL
Sbjct: 200 LNWTAKHTNLQESLKMAWRWQKL 222
>At3g18390.1 68416.m02339 expressed protein contains Pfam domain,
PF04581: Protein of unknown function (DUF578)
Length = 848
Score = 28.3 bits (60), Expect = 4.5
Identities = 29/99 (29%), Positives = 43/99 (43%)
Frame = +3
Query: 315 ERKELSKLFDAVEIMTTSRNRQPPNVQNMFSTLRLVERVVKKQLKEGQISESLAGKFQWE 494
ER+EL+K VE RNR+ VQ + K + G ++E + +W
Sbjct: 541 ERQELTKEIQDVEERV--RNREIEAVQPVGD---------KVPAEAGTLAEFYEAQARWG 589
Query: 495 KLSTRQRRERPLYHLDKFANVRMYKNIS*NLKSLFHIKF 611
K T RE+ + + AN R+ K I L +L KF
Sbjct: 590 KEITPDHREKMIEEASRVANARVVKRIQHKL-NLAQSKF 627
>At5g26860.1 68418.m03204 Lon protease homolog 2, mitochondrial
almost identical to Lon protease homolog 2
mitochondrial precursor SP:P93655, GI:1848290 from
[Arabidopsis thaliana]
Length = 940
Score = 27.5 bits (58), Expect = 7.9
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +3
Query: 411 LRLVERVVKKQLKEGQISESLAGKFQWEKLSTRQRR 518
LRL ++KK+++ +I E++A + EK+S QRR
Sbjct: 298 LRLTLELMKKEMEISKIQETIAKAIE-EKISGEQRR 332
>At5g09300.2 68418.m01077 2-oxoisovalerate dehydrogenase, putative /
3-methyl-2-oxobutanoate dehydrogenase, putative /
branched-chain alpha-keto acid dehydrogenase E1 alpha
subunit, putative similar to branched-chain alpha-keto
acid dehydrogenase E1-alpha subunit [Gallus gallus]
GI:12964598; contains Pfam profile PF00676:
Dehydrogenase E1 component
Length = 401
Score = 27.5 bits (58), Expect = 7.9
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = +3
Query: 174 HEMTDAKAAYKS-GEIPD-SSMPITLDNIKAKLKESGIFDWQDASLNDRERKELSKLFDA 347
H +D Y+S GEI + L + ++ +G W D + +D R + K +
Sbjct: 293 HSTSDDSTRYRSAGEIEWWNKARNPLSRFRTWIESNGW--WSDKTESDL-RSRIKK--EM 347
Query: 348 VEIMTTSRNRQPPNVQNMFS 407
+E + + + PN+QNMFS
Sbjct: 348 LEALRVAEKTEKPNLQNMFS 367
>At5g09300.1 68418.m01078 2-oxoisovalerate dehydrogenase, putative /
3-methyl-2-oxobutanoate dehydrogenase, putative /
branched-chain alpha-keto acid dehydrogenase E1 alpha
subunit, putative similar to branched-chain alpha-keto
acid dehydrogenase E1-alpha subunit [Gallus gallus]
GI:12964598; contains Pfam profile PF00676:
Dehydrogenase E1 component
Length = 472
Score = 27.5 bits (58), Expect = 7.9
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = +3
Query: 174 HEMTDAKAAYKS-GEIPD-SSMPITLDNIKAKLKESGIFDWQDASLNDRERKELSKLFDA 347
H +D Y+S GEI + L + ++ +G W D + +D R + K +
Sbjct: 364 HSTSDDSTRYRSAGEIEWWNKARNPLSRFRTWIESNGW--WSDKTESDL-RSRIKK--EM 418
Query: 348 VEIMTTSRNRQPPNVQNMFS 407
+E + + + PN+QNMFS
Sbjct: 419 LEALRVAEKTEKPNLQNMFS 438
>At4g04880.1 68417.m00710 adenosine/AMP deaminase family protein low
similarity to SP|P03958 Adenosine deaminase (EC 3.5.4.4)
(Adenosine aminohydrolase) {Mus musculus}; contains Pfam
profile PF00962: Adenosine/AMP deaminase
Length = 355
Score = 27.5 bits (58), Expect = 7.9
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Frame = +3
Query: 198 AYKSGEIPDSSMPITLDNIKAKLKESGIFDWQDAS----LNDRERKELSKLFDAVEIMTT 365
A+ +G I DS TL + L E G+ + D NDR E+ KLFD + +TT
Sbjct: 14 AHLNGSIRDS----TLLELARVLGEKGVIVFADVEHVIQKNDRSLVEVFKLFDLIHKLTT 69
>At3g10330.1 68416.m01239 transcription initiation factor IIB-2 /
general transcription factor TFIIB-2 (TFIIB2) identical
to SP|Q9SS44 Transcription initiation factor IIB-2
(General transcription factor TFIIB-2) (AtTFIIB2)
{Arabidopsis thaliana}
Length = 312
Score = 27.5 bits (58), Expect = 7.9
Identities = 10/15 (66%), Positives = 14/15 (93%)
Frame = -2
Query: 165 IACRKKERPRTVKSI 121
IACR++++PRTVK I
Sbjct: 157 IACRQEDKPRTVKEI 171
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,891,084
Number of Sequences: 28952
Number of extensions: 247782
Number of successful extensions: 721
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 721
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1305036432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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