Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11f15
         (758 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q55EM9 Cluster: Putative uncharacterized protein; n=1; ...    35   2.5  
UniRef50_Q4A9G2 Cluster: Putative uncharacterized protein; n=5; ...    34   3.3  
UniRef50_Q7RA50 Cluster: Putative uncharacterized protein PY0665...    33   5.8  
UniRef50_A1IMI9 Cluster: Hypothetical transmembrane protein; n=1...    33   7.7  
UniRef50_Q7RAH7 Cluster: Clathrin coat assembly protein ap50; n=...    33   7.7  
UniRef50_Q23ZE0 Cluster: Putative uncharacterized protein; n=1; ...    33   7.7  
UniRef50_O96171 Cluster: Putative uncharacterized protein PFB038...    33   7.7  

>UniRef50_Q55EM9 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 529

 Score = 34.7 bits (76), Expect = 2.5
 Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
 Frame = -1

Query: 620 SRPIQNINRNAIRYISSNNVFHDSIDFSIVPSHLVD-ELPICYDCTSPSSSLLNTKIDIA 444
           S  I NIN N   ++       + + FS+ PS +VD +  I Y  T  +   ++ +ID+ 
Sbjct: 345 SNNINNINNNNNSWLKQ---IDERLHFSLRPSTVVDLDKGIVYQ-TKRNHEYVDKRIDLF 400

Query: 443 AD-IKDNYHQNNEIRN 399
           +  I DNYHQ  E  N
Sbjct: 401 SKLIVDNYHQGKEFEN 416


>UniRef50_Q4A9G2 Cluster: Putative uncharacterized protein; n=5;
            Mycoplasma hyopneumoniae|Rep: Putative uncharacterized
            protein - Mycoplasma hyopneumoniae (strain J / ATCC 25934
            / NCTC 10110)
          Length = 1973

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
 Frame = -1

Query: 479  SSSLLNTKID-IAADIKDNYHQNNEIRNEETQ*DQHVFGNVDQMIVGLDKTAKGAVS*II 303
            + S+  + ID ++ DI +NY++ NE  N  +  DQ     +  +   + +T   A+S  I
Sbjct: 1200 TKSIFESIIDSLSVDIANNYYKKNE--NSWSTSDQISQNEIANLFAEIAQTE--AISEKI 1255

Query: 302  RSAFIINIFCCSRENVTAMNDYFLFALRFVQLYD 201
            +S FI NI    RE +  + D FL +   V+L+D
Sbjct: 1256 KSNFI-NIHLEYREKIQQIFDAFLKSNALVELFD 1288


>UniRef50_Q7RA50 Cluster: Putative uncharacterized protein PY06655;
           n=1; Plasmodium yoelii yoelii|Rep: Putative
           uncharacterized protein PY06655 - Plasmodium yoelii
           yoelii
          Length = 1391

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 7/99 (7%)
 Frame = +3

Query: 195 NRIVELNEAKCKQKVIVHRCNIFTRTAENIYDKCASYNLRYCPFGRFVKSNNHLVNVSKD 374
           N I++ N +K     + +   I+  ++EN      + N  Y     FVK  N+ + + K 
Sbjct: 226 NEIIQFNASK-----LFYYIPIYIASSEN------AINYVYQVLDNFVKERNNFIYL-KG 273

Query: 375 VLILLCFLIANFIV-----LMIIIFNI--SCDVYFGIKQ 470
            LILLCF+  N I      L   ++NI   C  Y+ +KQ
Sbjct: 274 YLILLCFINENIISHVCSDLFYFLYNILKKCTTYYKVKQ 312


>UniRef50_A1IMI9 Cluster: Hypothetical transmembrane protein; n=1;
           Oenococcus oeni|Rep: Hypothetical transmembrane protein
           - Oenococcus oeni (Leuconostoc oenos)
          Length = 186

 Score = 33.1 bits (72), Expect = 7.7
 Identities = 14/40 (35%), Positives = 25/40 (62%)
 Frame = -3

Query: 132 FRYIYKAFFLVSPLLEYISKVVGEILLFILYFGYGILSCF 13
           F Y+    +LV+P+L  I+K+  +  LF+L   Y +++CF
Sbjct: 113 FFYVILVLYLVTPMLSAIAKLKEKDYLFLLVSVYVVINCF 152


>UniRef50_Q7RAH7 Cluster: Clathrin coat assembly protein ap50; n=5;
           Plasmodium (Vinckeia)|Rep: Clathrin coat assembly
           protein ap50 - Plasmodium yoelii yoelii
          Length = 601

 Score = 33.1 bits (72), Expect = 7.7
 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
 Frame = -1

Query: 578 ISSNNVFHDSIDFSIVPSHLVDELPICYDCTSPSSSLLNTK--IDIAADIKDNYHQNNEI 405
           I++NN+ H  I+  +V    +  +PIC   T+   +LLN K    I  +   +   N + 
Sbjct: 275 INNNNLIHAHINGKVVLKCFLSGMPICELSTNNKFNLLNDKNTTSIGGENNTSAKYNEKK 334

Query: 404 RNEET 390
           RN ET
Sbjct: 335 RNNET 339


>UniRef50_Q23ZE0 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 1053

 Score = 33.1 bits (72), Expect = 7.7
 Identities = 22/66 (33%), Positives = 33/66 (50%)
 Frame = +3

Query: 120 KCTGIKGANDKCSLKASLDIQNRGPNRIVELNEAKCKQKVIVHRCNIFTRTAENIYDKCA 299
           K  G K ++D+  +  S  IQN   N+I++L     K KV +  C    + AE++ D C 
Sbjct: 477 KLEGYKRSHDEKEIAGSRSIQNF--NKILDLECCNWKLKVQIQLCEKEIKKAESLKDNC- 533

Query: 300 SYNLRY 317
            Y L Y
Sbjct: 534 -YLLEY 538


>UniRef50_O96171 Cluster: Putative uncharacterized protein PFB0380c;
            n=1; Plasmodium falciparum 3D7|Rep: Putative
            uncharacterized protein PFB0380c - Plasmodium falciparum
            (isolate 3D7)
          Length = 2010

 Score = 33.1 bits (72), Expect = 7.7
 Identities = 15/48 (31%), Positives = 28/48 (58%)
 Frame = -1

Query: 569  NNVFHDSIDFSIVPSHLVDELPICYDCTSPSSSLLNTKIDIAADIKDN 426
            N++ H+S  + I+ ++  DE+ I YD T  + + +NT   +  D+K N
Sbjct: 969  NHIIHNSDVYKILNNYYKDEIFIVYDITKWTENCMNTTDILYNDVKKN 1016


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 673,619,902
Number of Sequences: 1657284
Number of extensions: 13210079
Number of successful extensions: 32726
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 31312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32713
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62969581935
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)