Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11f15
         (758 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78542-6|CAB01749.2|  695|Caenorhabditis elegans Hypothetical pr...    31   0.67 
Z81110-3|CAB03257.1|  323|Caenorhabditis elegans Hypothetical pr...    29   3.6  
AL032639-3|CAA21635.1|  283|Caenorhabditis elegans Hypothetical ...    28   8.3  

>Z78542-6|CAB01749.2|  695|Caenorhabditis elegans Hypothetical
           protein F20D1.7 protein.
          Length = 695

 Score = 31.5 bits (68), Expect = 0.67
 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = +3

Query: 132 IKGANDKCSLKASLDIQNRGPNRIVELNEAKCKQKV-IVHRCNIFTRTAENIYD 290
           IKG    CS   S D+Q+ G   IV+ N+A CK K+  V + +   +T E   D
Sbjct: 346 IKGTQLDCSC-TSRDMQDYGAITIVDWNDATCKTKIGAVQKLSHLEKTGEPCRD 398


>Z81110-3|CAB03257.1|  323|Caenorhabditis elegans Hypothetical
           protein T01D3.4 protein.
          Length = 323

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 17/48 (35%), Positives = 29/48 (60%)
 Frame = +3

Query: 345 NNHLVNVSKDVLILLCFLIANFIVLMIIIFNISCDVYFGIKQAATRRS 488
           N++  NV+ D+L L+C ++A F V++ I+  I   + F  KQ+ T  S
Sbjct: 168 NDNCDNVNLDILKLICLVLAVFNVVVQILNLIKIKLMFS-KQSRTASS 214


>AL032639-3|CAA21635.1|  283|Caenorhabditis elegans Hypothetical
           protein Y38F1A.2 protein.
          Length = 283

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = +3

Query: 270 TAENIYDKCASYNLRYCPFGRFVKSNNHLVNVSKDVLILLCFLIANF 410
           T+E   D     N+R   + R    N  +++  +D+ IL+ +LI NF
Sbjct: 165 TSEETDDHIQENNIRIDDYNRRFSINRPVLDYIRDIPILIPYLIRNF 211


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,202,945
Number of Sequences: 27780
Number of extensions: 337395
Number of successful extensions: 875
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 875
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)