Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11f14
(523 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U43923-1|AAB07814.1| 117|Homo sapiens SUPT4H protein. 193 4e-49
U38818-1|AAB18674.1| 117|Homo sapiens SUPT4H protein. 193 4e-49
U38817-1|AAB18675.1| 117|Homo sapiens SUPT4H protein. 193 4e-49
CR407663-1|CAG28591.1| 117|Homo sapiens SUPT4H1 protein. 193 4e-49
BC002802-1|AAH02802.1| 117|Homo sapiens suppressor of Ty 4 homo... 193 4e-49
AK129758-1|BAC85230.1| 135|Homo sapiens protein ( Homo sapiens ... 169 7e-42
Z75048-1|CAA99340.1| 445|Homo sapiens homogentisate 1,2-dioxyge... 32 1.1
U63008-1|AAB16836.1| 445|Homo sapiens homogentisate dioxygenase... 32 1.1
BC071757-1|AAH71757.1| 445|Homo sapiens homogentisate 1,2-dioxy... 32 1.1
AF045167-1|AAC02698.1| 445|Homo sapiens homogentisate 1,2-dioxy... 32 1.1
AF000573-1|AAC51650.1| 445|Homo sapiens homogentisate 1,2-dioxy... 32 1.1
Z49825-1|CAA89989.1| 504|Homo sapiens hepatocyte nuclear factor... 31 2.4
X87872-1|CAA61135.1| 408|Homo sapiens Hepatocyte nuclear factor... 31 2.4
X87871-1|CAA61134.1| 465|Homo sapiens Hepatocyte nuclear factor... 31 2.4
X87870-1|CAA61133.1| 455|Homo sapiens Hepatocyte nuclear factor... 31 2.4
X76930-1|CAA54248.1| 465|Homo sapiens hepatocyte nuclear factor... 31 2.4
X63522-1|CAA45087.1| 533|Homo sapiens retinoic acid X receptor ... 31 2.4
U72969-1|AAB48082.1| 516|Homo sapiens hepatocyte nuclear factor... 31 2.4
U72967-1|AAB48083.1| 408|Homo sapiens hepatocyte nuclear factor... 31 2.4
M84820-1|AAA60293.1| 533|Homo sapiens retinoid X receptor beta ... 31 2.4
EF591040-1|ABQ52204.1| 474|Homo sapiens hepatocyte nuclear fact... 31 2.4
CR542091-1|CAG46888.1| 408|Homo sapiens HNF4G protein. 31 2.4
BT007280-1|AAP35944.1| 533|Homo sapiens retinoid X receptor, be... 31 2.4
BC105011-1|AAI05012.1| 408|Homo sapiens HNF4G protein protein. 31 2.4
BC105009-1|AAI05010.1| 408|Homo sapiens HNF4G protein protein. 31 2.4
BC054009-1|AAH54009.1| 80|Homo sapiens HNF4G protein protein. 31 2.4
BC001167-1|AAH01167.1| 533|Homo sapiens retinoid X receptor, be... 31 2.4
AY680698-1|AAT91239.1| 395|Homo sapiens hepatocyte nuclear fact... 31 2.4
AY680697-1|AAT91238.1| 452|Homo sapiens hepatocyte nuclear fact... 31 2.4
AY680696-1|AAT91237.1| 442|Homo sapiens hepatocyte nuclear fact... 31 2.4
AL844527-9|CAI41836.2| 537|Homo sapiens retinoid X receptor, be... 31 2.4
AL844527-8|CAI41837.1| 533|Homo sapiens retinoid X receptor, be... 31 2.4
AL662824-21|CAI17612.2| 537|Homo sapiens retinoid X receptor, b... 31 2.4
AL662824-20|CAI17614.1| 533|Homo sapiens retinoid X receptor, b... 31 2.4
AL645940-7|CAI18064.2| 537|Homo sapiens retinoid X receptor, be... 31 2.4
AL645940-6|CAI18066.1| 533|Homo sapiens retinoid X receptor, be... 31 2.4
AL132772-10|CAI18863.1| 100|Homo sapiens hepatocyte nuclear fac... 31 2.4
AL132772-3|CAI18857.1| 467|Homo sapiens hepatocyte nuclear fact... 31 2.4
AL132772-2|CAC01303.1| 474|Homo sapiens hepatocyte nuclear fact... 31 2.4
AL132772-1|CAI18856.1| 417|Homo sapiens hepatocyte nuclear fact... 31 2.4
AL117382-6|CAI23113.1| 100|Homo sapiens hepatocyte nuclear fact... 31 2.4
AL031228-14|CAI95622.1| 482|Homo sapiens retinoid X receptor, b... 31 2.4
AL031228-13|CAA20239.1| 533|Homo sapiens retinoid X receptor, b... 31 2.4
AL031228-12|CAI95621.1| 262|Homo sapiens retinoid X receptor, b... 31 2.4
AJ250835-1|CAB60726.1| 381|Homo sapiens retinoic acid receptor ... 31 2.4
AF120161-1|AAD13794.1| 533|Homo sapiens retinoic X receptor bet... 31 2.4
AF065396-1|AAC18599.1| 533|Homo sapiens retinoic X receptor B p... 31 2.4
AB209244-1|BAD92481.1| 577|Homo sapiens retinoid X receptor, be... 31 2.4
AB020632-1|BAA74848.1| 553|Homo sapiens KIAA0825 protein protein. 31 3.2
X51417-1|CAA35779.1| 433|Homo sapiens protein ( Human mRNA for ... 30 4.3
U38480-1|AAA80681.1| 463|Homo sapiens retinoid X receptor-gamma... 30 4.3
CR456705-1|CAG32986.1| 463|Homo sapiens RXRG protein. 30 4.3
BC131517-1|AAI31518.1| 503|Homo sapiens ESRRB protein protein. 30 4.3
BC012063-1|AAH12063.1| 463|Homo sapiens retinoid X receptor, ga... 30 4.3
AY451390-1|AAS15572.1| 508|Homo sapiens estrogen receptor-relat... 30 4.3
AY451389-1|AAS15571.1| 433|Homo sapiens estrogen receptor-relat... 30 4.3
AL160058-2|CAC00596.1| 463|Homo sapiens retinoid X receptor, ga... 30 4.3
AF094517-1|AAC99409.1| 500|Homo sapiens nuclear receptor ERRB2 ... 30 4.3
AC016543-1|AAG29619.1| 262|Homo sapiens hERRB2 protein. 30 4.3
Z49826-1|CAA89990.2| 408|Homo sapiens hepatocyte nuclear factor... 30 5.7
M57707-1|AAA63254.1| 454|Homo sapiens retinoic acid receptor-ga... 30 5.7
M38258-1|AAA60254.1| 454|Homo sapiens retinoic acid receptor-ga... 30 5.7
M24857-1|AAA52692.1| 454|Homo sapiens RARG protein. 30 5.7
BC093729-1|AAH93729.1| 454|Homo sapiens retinoic acid receptor,... 30 5.7
BC093727-1|AAH93727.1| 454|Homo sapiens retinoic acid receptor,... 30 5.7
AF133504-1|AAF00110.1| 408|Homo sapiens hepatocyte nuclear fact... 30 5.7
BC000650-1|AAH00650.2| 403|Homo sapiens F-box protein 9 protein. 29 7.5
AY858798-1|AAW51115.1| 437|Homo sapiens cross-immune reaction a... 29 7.5
AL031178-3|CAI20263.1| 447|Homo sapiens F-box protein 9 protein. 29 7.5
AL031178-2|CAI20262.1| 437|Homo sapiens F-box protein 9 protein. 29 7.5
AF176704-1|AAF03704.1| 447|Homo sapiens F-box protein FBX9 prot... 29 7.5
AF174597-1|AAF04518.1| 327|Homo sapiens F-box protein Fbx9 prot... 29 7.5
AB209833-1|BAD93070.1| 554|Homo sapiens F-box only protein 9 is... 29 7.5
Y13276-1|CAA73725.1| 385|Homo sapiens Tailless protein protein. 29 9.9
X52773-1|CAA36982.1| 462|Homo sapiens protein ( Human mRNA for ... 29 9.9
U10990-1|AAC50118.1| 596|Homo sapiens hTAK1 protein. 29 9.9
DQ303444-1|ABB96254.1| 452|Homo sapiens retinoid X receptor, al... 29 9.9
BC110998-1|AAI10999.1| 462|Homo sapiens retinoid X receptor, al... 29 9.9
BC063827-1|AAH63827.1| 516|Homo sapiens RXRA protein protein. 29 9.9
BC051670-1|AAH51670.1| 530|Homo sapiens NR2C2 protein protein. 29 9.9
BC028031-1|AAH28031.1| 385|Homo sapiens nuclear receptor subfam... 29 9.9
AL669970-1|CAM45733.1| 462|Homo sapiens retinoid X receptor, al... 29 9.9
AL354796-1|CAH70571.1| 462|Homo sapiens retinoid X receptor, al... 29 9.9
AL078596-2|CAO03480.1| 422|Homo sapiens nuclear receptor subfam... 29 9.9
AL078596-1|CAB75626.1| 385|Homo sapiens nuclear receptor subfam... 29 9.9
AK131541-1|BAD18677.1| 422|Homo sapiens protein ( Homo sapiens ... 29 9.9
AK094792-1|BAC04425.1| 477|Homo sapiens protein ( Homo sapiens ... 29 9.9
AF411525-1|AAL05871.1| 385|Homo sapiens nuclear receptor subfam... 29 9.9
AF275818-1|AAF87244.1| 504|Homo sapiens PR-domain containing pr... 29 9.9
AF220532-1|AAG31945.1| 385|Homo sapiens orphan nuclear receptor... 29 9.9
>U43923-1|AAB07814.1| 117|Homo sapiens SUPT4H protein.
Length = 117
Score = 193 bits (470), Expect = 4e-49
Identities = 79/114 (69%), Positives = 103/114 (90%)
Frame = +1
Query: 85 MSIETVPKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGM 264
M++ETVPK+LR LRACL+CSL+KT DQFEY+GCDNCD +L+MK N++ VYDCTS++FDG+
Sbjct: 1 MALETVPKDLRHLRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGI 60
Query: 265 IAVMNPEDSWVCKWQRISRFCKGVYAISVSGRLPAGVIREMKSRGIAYRPRDTS 426
IA+M+PEDSWV KWQR+S F GVYA+SV+GRLP G++RE+KSRG+AY+ RDT+
Sbjct: 61 IAMMSPEDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAYKSRDTA 114
>U38818-1|AAB18674.1| 117|Homo sapiens SUPT4H protein.
Length = 117
Score = 193 bits (470), Expect = 4e-49
Identities = 79/114 (69%), Positives = 103/114 (90%)
Frame = +1
Query: 85 MSIETVPKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGM 264
M++ETVPK+LR LRACL+CSL+KT DQFEY+GCDNCD +L+MK N++ VYDCTS++FDG+
Sbjct: 1 MALETVPKDLRHLRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGI 60
Query: 265 IAVMNPEDSWVCKWQRISRFCKGVYAISVSGRLPAGVIREMKSRGIAYRPRDTS 426
IA+M+PEDSWV KWQR+S F GVYA+SV+GRLP G++RE+KSRG+AY+ RDT+
Sbjct: 61 IAMMSPEDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAYKSRDTA 114
>U38817-1|AAB18675.1| 117|Homo sapiens SUPT4H protein.
Length = 117
Score = 193 bits (470), Expect = 4e-49
Identities = 79/114 (69%), Positives = 103/114 (90%)
Frame = +1
Query: 85 MSIETVPKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGM 264
M++ETVPK+LR LRACL+CSL+KT DQFEY+GCDNCD +L+MK N++ VYDCTS++FDG+
Sbjct: 1 MALETVPKDLRHLRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGI 60
Query: 265 IAVMNPEDSWVCKWQRISRFCKGVYAISVSGRLPAGVIREMKSRGIAYRPRDTS 426
IA+M+PEDSWV KWQR+S F GVYA+SV+GRLP G++RE+KSRG+AY+ RDT+
Sbjct: 61 IAMMSPEDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAYKSRDTA 114
>CR407663-1|CAG28591.1| 117|Homo sapiens SUPT4H1 protein.
Length = 117
Score = 193 bits (470), Expect = 4e-49
Identities = 79/114 (69%), Positives = 103/114 (90%)
Frame = +1
Query: 85 MSIETVPKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGM 264
M++ETVPK+LR LRACL+CSL+KT DQFEY+GCDNCD +L+MK N++ VYDCTS++FDG+
Sbjct: 1 MALETVPKDLRHLRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGI 60
Query: 265 IAVMNPEDSWVCKWQRISRFCKGVYAISVSGRLPAGVIREMKSRGIAYRPRDTS 426
IA+M+PEDSWV KWQR+S F GVYA+SV+GRLP G++RE+KSRG+AY+ RDT+
Sbjct: 61 IAMMSPEDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAYKSRDTA 114
>BC002802-1|AAH02802.1| 117|Homo sapiens suppressor of Ty 4 homolog
1 (S. cerevisiae) protein.
Length = 117
Score = 193 bits (470), Expect = 4e-49
Identities = 79/114 (69%), Positives = 103/114 (90%)
Frame = +1
Query: 85 MSIETVPKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGM 264
M++ETVPK+LR LRACL+CSL+KT DQFEY+GCDNCD +L+MK N++ VYDCTS++FDG+
Sbjct: 1 MALETVPKDLRHLRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGI 60
Query: 265 IAVMNPEDSWVCKWQRISRFCKGVYAISVSGRLPAGVIREMKSRGIAYRPRDTS 426
IA+M+PEDSWV KWQR+S F GVYA+SV+GRLP G++RE+KSRG+AY+ RDT+
Sbjct: 61 IAMMSPEDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAYKSRDTA 114
>AK129758-1|BAC85230.1| 135|Homo sapiens protein ( Homo sapiens
cDNA FLJ26247 fis, clone DMC01574. ).
Length = 135
Score = 169 bits (410), Expect = 7e-42
Identities = 72/115 (62%), Positives = 96/115 (83%)
Frame = +1
Query: 85 MSIETVPKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGM 264
M++ETVPK+LR LRACL+CSL+KT DQFEY+GCDNCD +L+MK N++ VYDCTS++FDG+
Sbjct: 1 MALETVPKDLRHLRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGI 60
Query: 265 IAVMNPEDSWVCKWQRISRFCKGVYAISVSGRLPAGVIREMKSRGIAYRPRDTSQ 429
IA+M+PEDSWV KWQR+S F GVYA+SV+GRLP ++ +S Y PR++S+
Sbjct: 61 IAMMSPEDSWVSKWQRVSNFKPGVYAVSVTGRLPHA--KDSRSNVNKYEPRESSE 113
>Z75048-1|CAA99340.1| 445|Homo sapiens homogentisate
1,2-dioxygenase protein.
Length = 445
Score = 32.3 bits (70), Expect = 1.1
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -2
Query: 435 LSLACVPWAIGNTSTLHFSYYTCWQPSRNRYCINS 331
LSLA W + + L +Y+ CW+P ++ + NS
Sbjct: 404 LSLAVTKWGLKASRCLDENYHKCWEPLKSHFTPNS 438
>U63008-1|AAB16836.1| 445|Homo sapiens homogentisate dioxygenase
protein.
Length = 445
Score = 32.3 bits (70), Expect = 1.1
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -2
Query: 435 LSLACVPWAIGNTSTLHFSYYTCWQPSRNRYCINS 331
LSLA W + + L +Y+ CW+P ++ + NS
Sbjct: 404 LSLAVTKWGLKASRCLDENYHKCWEPLKSHFTPNS 438
>BC071757-1|AAH71757.1| 445|Homo sapiens homogentisate
1,2-dioxygenase (homogentisate oxidase) protein.
Length = 445
Score = 32.3 bits (70), Expect = 1.1
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -2
Query: 435 LSLACVPWAIGNTSTLHFSYYTCWQPSRNRYCINS 331
LSLA W + + L +Y+ CW+P ++ + NS
Sbjct: 404 LSLAVTKWGLKASRCLDENYHKCWEPLKSHFTPNS 438
>AF045167-1|AAC02698.1| 445|Homo sapiens homogentisate
1,2-dioxygenase protein.
Length = 445
Score = 32.3 bits (70), Expect = 1.1
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -2
Query: 435 LSLACVPWAIGNTSTLHFSYYTCWQPSRNRYCINS 331
LSLA W + + L +Y+ CW+P ++ + NS
Sbjct: 404 LSLAVTKWGLKASRCLDENYHKCWEPLKSHFTPNS 438
>AF000573-1|AAC51650.1| 445|Homo sapiens homogentisate
1,2-dioxygenase protein.
Length = 445
Score = 32.3 bits (70), Expect = 1.1
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -2
Query: 435 LSLACVPWAIGNTSTLHFSYYTCWQPSRNRYCINS 331
LSLA W + + L +Y+ CW+P ++ + NS
Sbjct: 404 LSLAVTKWGLKASRCLDENYHKCWEPLKSHFTPNS 438
>Z49825-1|CAA89989.1| 504|Homo sapiens hepatocyte nuclear factor 4
alpha (HNF4alpha4) protein.
Length = 504
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/46 (28%), Positives = 18/46 (39%)
Frame = +1
Query: 103 PKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDC 240
P L C +C T + CD C F R K+++Y C
Sbjct: 81 PNSLGVSALCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSC 126
>X87872-1|CAA61135.1| 408|Homo sapiens Hepatocyte nuclear factor 4C
protein.
Length = 408
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/46 (28%), Positives = 18/46 (39%)
Frame = +1
Query: 103 PKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDC 240
P L C +C T + CD C F R K+++Y C
Sbjct: 42 PNSLGVSALCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSC 87
>X87871-1|CAA61134.1| 465|Homo sapiens Hepatocyte nuclear factor 4B
protein.
Length = 465
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/46 (28%), Positives = 18/46 (39%)
Frame = +1
Query: 103 PKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDC 240
P L C +C T + CD C F R K+++Y C
Sbjct: 42 PNSLGVSALCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSC 87
>X87870-1|CAA61133.1| 455|Homo sapiens Hepatocyte nuclear factor 4A
protein.
Length = 455
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/46 (28%), Positives = 18/46 (39%)
Frame = +1
Query: 103 PKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDC 240
P L C +C T + CD C F R K+++Y C
Sbjct: 42 PNSLGVSALCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSC 87
>X76930-1|CAA54248.1| 465|Homo sapiens hepatocyte nuclear factor 4
protein.
Length = 465
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/46 (28%), Positives = 18/46 (39%)
Frame = +1
Query: 103 PKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDC 240
P L C +C T + CD C F R K+++Y C
Sbjct: 42 PNSLGVSALCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSC 87
>X63522-1|CAA45087.1| 533|Homo sapiens retinoic acid X receptor b
protein.
Length = 533
Score = 31.1 bits (67), Expect = 2.4
Identities = 15/65 (23%), Positives = 24/65 (36%)
Frame = +1
Query: 118 GLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWV 297
G R C +C + + C+ C F + KD Y C N D +
Sbjct: 201 GKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNK-DCTVDKRQRNRCQY 259
Query: 298 CKWQR 312
C++Q+
Sbjct: 260 CRYQK 264
>U72969-1|AAB48082.1| 516|Homo sapiens hepatocyte nuclear factor
4-alpha protein.
Length = 516
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/46 (28%), Positives = 18/46 (39%)
Frame = +1
Query: 103 PKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDC 240
P L C +C T + CD C F R K+++Y C
Sbjct: 93 PNSLGVSALCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSC 138
>U72967-1|AAB48083.1| 408|Homo sapiens hepatocyte nuclear factor
4-alpha protein.
Length = 408
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/46 (28%), Positives = 18/46 (39%)
Frame = +1
Query: 103 PKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDC 240
P L C +C T + CD C F R K+++Y C
Sbjct: 42 PNSLGVSALCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSC 87
>M84820-1|AAA60293.1| 533|Homo sapiens retinoid X receptor beta
protein.
Length = 533
Score = 31.1 bits (67), Expect = 2.4
Identities = 15/65 (23%), Positives = 24/65 (36%)
Frame = +1
Query: 118 GLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWV 297
G R C +C + + C+ C F + KD Y C N D +
Sbjct: 201 GKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNK-DCTVDKRQRNRCQY 259
Query: 298 CKWQR 312
C++Q+
Sbjct: 260 CRYQK 264
>EF591040-1|ABQ52204.1| 474|Homo sapiens hepatocyte nuclear factor
4, alpha protein.
Length = 474
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/46 (28%), Positives = 18/46 (39%)
Frame = +1
Query: 103 PKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDC 240
P L C +C T + CD C F R K+++Y C
Sbjct: 51 PNSLGVSALCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSC 96
>CR542091-1|CAG46888.1| 408|Homo sapiens HNF4G protein.
Length = 408
Score = 31.1 bits (67), Expect = 2.4
Identities = 12/37 (32%), Positives = 15/37 (40%)
Frame = +1
Query: 130 CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDC 240
C +C T + CD C F R K +VY C
Sbjct: 12 CAICGDRATGKHYGASSCDGCKGFFRRSIRKSHVYSC 48
>BT007280-1|AAP35944.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 31.1 bits (67), Expect = 2.4
Identities = 15/65 (23%), Positives = 24/65 (36%)
Frame = +1
Query: 118 GLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWV 297
G R C +C + + C+ C F + KD Y C N D +
Sbjct: 201 GKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNK-DCTVDKRQRNRCQY 259
Query: 298 CKWQR 312
C++Q+
Sbjct: 260 CRYQK 264
>BC105011-1|AAI05012.1| 408|Homo sapiens HNF4G protein protein.
Length = 408
Score = 31.1 bits (67), Expect = 2.4
Identities = 12/37 (32%), Positives = 15/37 (40%)
Frame = +1
Query: 130 CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDC 240
C +C T + CD C F R K +VY C
Sbjct: 12 CAICGDRATGKHYGASSCDGCKGFFRRSIRKSHVYSC 48
>BC105009-1|AAI05010.1| 408|Homo sapiens HNF4G protein protein.
Length = 408
Score = 31.1 bits (67), Expect = 2.4
Identities = 12/37 (32%), Positives = 15/37 (40%)
Frame = +1
Query: 130 CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDC 240
C +C T + CD C F R K +VY C
Sbjct: 12 CAICGDRATGKHYGASSCDGCKGFFRRSIRKSHVYSC 48
>BC054009-1|AAH54009.1| 80|Homo sapiens HNF4G protein protein.
Length = 80
Score = 31.1 bits (67), Expect = 2.4
Identities = 12/37 (32%), Positives = 15/37 (40%)
Frame = +1
Query: 130 CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDC 240
C +C T + CD C F R K +VY C
Sbjct: 12 CAICGDRATGKHYGASSCDGCKGFFRRSIRKSHVYSC 48
>BC001167-1|AAH01167.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 31.1 bits (67), Expect = 2.4
Identities = 15/65 (23%), Positives = 24/65 (36%)
Frame = +1
Query: 118 GLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWV 297
G R C +C + + C+ C F + KD Y C N D +
Sbjct: 201 GKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNK-DCTVDKRQRNRCQY 259
Query: 298 CKWQR 312
C++Q+
Sbjct: 260 CRYQK 264
>AY680698-1|AAT91239.1| 395|Homo sapiens hepatocyte nuclear factor
4 alpha, transcript variant 9 protein.
Length = 395
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/46 (28%), Positives = 18/46 (39%)
Frame = +1
Query: 103 PKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDC 240
P L C +C T + CD C F R K+++Y C
Sbjct: 29 PNSLGVSALCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSC 74
>AY680697-1|AAT91238.1| 452|Homo sapiens hepatocyte nuclear factor
4 alpha, transcript variant 8 protein.
Length = 452
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/46 (28%), Positives = 18/46 (39%)
Frame = +1
Query: 103 PKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDC 240
P L C +C T + CD C F R K+++Y C
Sbjct: 29 PNSLGVSALCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSC 74
>AY680696-1|AAT91237.1| 442|Homo sapiens hepatocyte nuclear factor
4 alpha, transcript variant 7 protein.
Length = 442
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/46 (28%), Positives = 18/46 (39%)
Frame = +1
Query: 103 PKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDC 240
P L C +C T + CD C F R K+++Y C
Sbjct: 29 PNSLGVSALCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSC 74
>AL844527-9|CAI41836.2| 537|Homo sapiens retinoid X receptor, beta
protein.
Length = 537
Score = 31.1 bits (67), Expect = 2.4
Identities = 15/65 (23%), Positives = 24/65 (36%)
Frame = +1
Query: 118 GLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWV 297
G R C +C + + C+ C F + KD Y C N D +
Sbjct: 201 GKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNK-DCTVDKRQRNRCQY 259
Query: 298 CKWQR 312
C++Q+
Sbjct: 260 CRYQK 264
>AL844527-8|CAI41837.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 31.1 bits (67), Expect = 2.4
Identities = 15/65 (23%), Positives = 24/65 (36%)
Frame = +1
Query: 118 GLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWV 297
G R C +C + + C+ C F + KD Y C N D +
Sbjct: 201 GKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNK-DCTVDKRQRNRCQY 259
Query: 298 CKWQR 312
C++Q+
Sbjct: 260 CRYQK 264
>AL662824-21|CAI17612.2| 537|Homo sapiens retinoid X receptor, beta
protein.
Length = 537
Score = 31.1 bits (67), Expect = 2.4
Identities = 15/65 (23%), Positives = 24/65 (36%)
Frame = +1
Query: 118 GLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWV 297
G R C +C + + C+ C F + KD Y C N D +
Sbjct: 201 GKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNK-DCTVDKRQRNRCQY 259
Query: 298 CKWQR 312
C++Q+
Sbjct: 260 CRYQK 264
>AL662824-20|CAI17614.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 31.1 bits (67), Expect = 2.4
Identities = 15/65 (23%), Positives = 24/65 (36%)
Frame = +1
Query: 118 GLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWV 297
G R C +C + + C+ C F + KD Y C N D +
Sbjct: 201 GKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNK-DCTVDKRQRNRCQY 259
Query: 298 CKWQR 312
C++Q+
Sbjct: 260 CRYQK 264
>AL645940-7|CAI18064.2| 537|Homo sapiens retinoid X receptor, beta
protein.
Length = 537
Score = 31.1 bits (67), Expect = 2.4
Identities = 15/65 (23%), Positives = 24/65 (36%)
Frame = +1
Query: 118 GLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWV 297
G R C +C + + C+ C F + KD Y C N D +
Sbjct: 201 GKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNK-DCTVDKRQRNRCQY 259
Query: 298 CKWQR 312
C++Q+
Sbjct: 260 CRYQK 264
>AL645940-6|CAI18066.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 31.1 bits (67), Expect = 2.4
Identities = 15/65 (23%), Positives = 24/65 (36%)
Frame = +1
Query: 118 GLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWV 297
G R C +C + + C+ C F + KD Y C N D +
Sbjct: 201 GKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNK-DCTVDKRQRNRCQY 259
Query: 298 CKWQR 312
C++Q+
Sbjct: 260 CRYQK 264
>AL132772-10|CAI18863.1| 100|Homo sapiens hepatocyte nuclear factor
4, alpha protein.
Length = 100
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/46 (28%), Positives = 18/46 (39%)
Frame = +1
Query: 103 PKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDC 240
P L C +C T + CD C F R K+++Y C
Sbjct: 29 PNSLGVSALCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSC 74
>AL132772-3|CAI18857.1| 467|Homo sapiens hepatocyte nuclear factor
4, alpha protein.
Length = 467
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/46 (28%), Positives = 18/46 (39%)
Frame = +1
Query: 103 PKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDC 240
P L C +C T + CD C F R K+++Y C
Sbjct: 44 PNSLGVSALCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSC 89
>AL132772-2|CAC01303.1| 474|Homo sapiens hepatocyte nuclear factor
4, alpha protein.
Length = 474
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/46 (28%), Positives = 18/46 (39%)
Frame = +1
Query: 103 PKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDC 240
P L C +C T + CD C F R K+++Y C
Sbjct: 51 PNSLGVSALCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSC 96
>AL132772-1|CAI18856.1| 417|Homo sapiens hepatocyte nuclear factor
4, alpha protein.
Length = 417
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/46 (28%), Positives = 18/46 (39%)
Frame = +1
Query: 103 PKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDC 240
P L C +C T + CD C F R K+++Y C
Sbjct: 51 PNSLGVSALCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSC 96
>AL117382-6|CAI23113.1| 100|Homo sapiens hepatocyte nuclear factor
4, alpha protein.
Length = 100
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/46 (28%), Positives = 18/46 (39%)
Frame = +1
Query: 103 PKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDC 240
P L C +C T + CD C F R K+++Y C
Sbjct: 29 PNSLGVSALCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSC 74
>AL031228-14|CAI95622.1| 482|Homo sapiens retinoid X receptor, beta
protein.
Length = 482
Score = 31.1 bits (67), Expect = 2.4
Identities = 15/65 (23%), Positives = 24/65 (36%)
Frame = +1
Query: 118 GLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWV 297
G R C +C + + C+ C F + KD Y C N D +
Sbjct: 150 GKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNK-DCTVDKRQRNRCQY 208
Query: 298 CKWQR 312
C++Q+
Sbjct: 209 CRYQK 213
>AL031228-13|CAA20239.1| 533|Homo sapiens retinoid X receptor, beta
protein.
Length = 533
Score = 31.1 bits (67), Expect = 2.4
Identities = 15/65 (23%), Positives = 24/65 (36%)
Frame = +1
Query: 118 GLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWV 297
G R C +C + + C+ C F + KD Y C N D +
Sbjct: 201 GKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNK-DCTVDKRQRNRCQY 259
Query: 298 CKWQR 312
C++Q+
Sbjct: 260 CRYQK 264
>AL031228-12|CAI95621.1| 262|Homo sapiens retinoid X receptor, beta
protein.
Length = 262
Score = 31.1 bits (67), Expect = 2.4
Identities = 15/65 (23%), Positives = 24/65 (36%)
Frame = +1
Query: 118 GLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWV 297
G R C +C + + C+ C F + KD Y C N D +
Sbjct: 172 GKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNK-DCTVDKRQRNRCQY 230
Query: 298 CKWQR 312
C++Q+
Sbjct: 231 CRYQK 235
>AJ250835-1|CAB60726.1| 381|Homo sapiens retinoic acid receptor
protein.
Length = 381
Score = 31.1 bits (67), Expect = 2.4
Identities = 14/53 (26%), Positives = 23/53 (43%)
Frame = +1
Query: 82 IMSIETVPKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDC 240
+ S + P R + C VC+ + + C+ C F R + K+ VY C
Sbjct: 1 VPSSPSPPPPPRVYKPCFVCNDKSSGYHYGVSSCEGCKGFFRRSTQKNMVYTC 53
>AF120161-1|AAD13794.1| 533|Homo sapiens retinoic X receptor beta
protein.
Length = 533
Score = 31.1 bits (67), Expect = 2.4
Identities = 15/65 (23%), Positives = 24/65 (36%)
Frame = +1
Query: 118 GLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWV 297
G R C +C + + C+ C F + KD Y C N D +
Sbjct: 201 GKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNK-DCTVDKRQRNRCQY 259
Query: 298 CKWQR 312
C++Q+
Sbjct: 260 CRYQK 264
>AF065396-1|AAC18599.1| 533|Homo sapiens retinoic X receptor B
protein.
Length = 533
Score = 31.1 bits (67), Expect = 2.4
Identities = 15/65 (23%), Positives = 24/65 (36%)
Frame = +1
Query: 118 GLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWV 297
G R C +C + + C+ C F + KD Y C N D +
Sbjct: 201 GKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNK-DCTVDKRQRNRCQY 259
Query: 298 CKWQR 312
C++Q+
Sbjct: 260 CRYQK 264
>AB209244-1|BAD92481.1| 577|Homo sapiens retinoid X receptor, beta
variant protein.
Length = 577
Score = 31.1 bits (67), Expect = 2.4
Identities = 15/65 (23%), Positives = 24/65 (36%)
Frame = +1
Query: 118 GLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWV 297
G R C +C + + C+ C F + KD Y C N D +
Sbjct: 241 GKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNK-DCTVDKRQRNRCQY 299
Query: 298 CKWQR 312
C++Q+
Sbjct: 300 CRYQK 304
>AB020632-1|BAA74848.1| 553|Homo sapiens KIAA0825 protein protein.
Length = 553
Score = 30.7 bits (66), Expect = 3.2
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -1
Query: 304 ICKPSCLQDSLLQSFHQSYYLCNHRHYLCYFSCEEIHHNCHSLHIQI 164
+C S LQD+ +S H Y + C FS + H+ C SLH +
Sbjct: 217 VCATSILQDA--ESHHWDDYKAFYEGERCSFSIQMWHYFCWSLHYDL 261
>X51417-1|CAA35779.1| 433|Homo sapiens protein ( Human mRNA for
steroid hormone receptor hERR2. ).
Length = 433
Score = 30.3 bits (65), Expect = 4.3
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = +1
Query: 70 IRCSIMSIETVPKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSN 249
I+C M + +PK L CLVC I + + C+ C F + + Y C +
Sbjct: 89 IKCEYM-LNAIPKRL-----CLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPAT 142
Query: 250 N 252
N
Sbjct: 143 N 143
>U38480-1|AAA80681.1| 463|Homo sapiens retinoid X receptor-gamma
protein.
Length = 463
Score = 30.3 bits (65), Expect = 4.3
Identities = 14/61 (22%), Positives = 24/61 (39%)
Frame = +1
Query: 130 CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWVCKWQ 309
C +C + + C+ C F + KD +Y C N D +I C++Q
Sbjct: 139 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNK-DCLIDKRQRNRCQYCRYQ 197
Query: 310 R 312
+
Sbjct: 198 K 198
>CR456705-1|CAG32986.1| 463|Homo sapiens RXRG protein.
Length = 463
Score = 30.3 bits (65), Expect = 4.3
Identities = 14/61 (22%), Positives = 24/61 (39%)
Frame = +1
Query: 130 CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWVCKWQ 309
C +C + + C+ C F + KD +Y C N D +I C++Q
Sbjct: 139 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNK-DCLIDKRQRNRCQYCRYQ 197
Query: 310 R 312
+
Sbjct: 198 K 198
>BC131517-1|AAI31518.1| 503|Homo sapiens ESRRB protein protein.
Length = 503
Score = 30.3 bits (65), Expect = 4.3
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = +1
Query: 70 IRCSIMSIETVPKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSN 249
I+C M + +PK L CLVC I + + C+ C F + + Y C +
Sbjct: 89 IKCEYM-LNAIPKRL-----CLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPAT 142
Query: 250 N 252
N
Sbjct: 143 N 143
>BC012063-1|AAH12063.1| 463|Homo sapiens retinoid X receptor, gamma
protein.
Length = 463
Score = 30.3 bits (65), Expect = 4.3
Identities = 14/61 (22%), Positives = 24/61 (39%)
Frame = +1
Query: 130 CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWVCKWQ 309
C +C + + C+ C F + KD +Y C N D +I C++Q
Sbjct: 139 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNK-DCLIDKRQRNRCQYCRYQ 197
Query: 310 R 312
+
Sbjct: 198 K 198
>AY451390-1|AAS15572.1| 508|Homo sapiens estrogen receptor-related
receptor beta2-delta-10 protein.
Length = 508
Score = 30.3 bits (65), Expect = 4.3
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = +1
Query: 70 IRCSIMSIETVPKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSN 249
I+C M + +PK L CLVC I + + C+ C F + + Y C +
Sbjct: 89 IKCEYM-LNAIPKRL-----CLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPAT 142
Query: 250 N 252
N
Sbjct: 143 N 143
>AY451389-1|AAS15571.1| 433|Homo sapiens estrogen receptor-related
receptor beta short form protein.
Length = 433
Score = 30.3 bits (65), Expect = 4.3
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = +1
Query: 70 IRCSIMSIETVPKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSN 249
I+C M + +PK L CLVC I + + C+ C F + + Y C +
Sbjct: 89 IKCEYM-LNAIPKRL-----CLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPAT 142
Query: 250 N 252
N
Sbjct: 143 N 143
>AL160058-2|CAC00596.1| 463|Homo sapiens retinoid X receptor, gamma
protein.
Length = 463
Score = 30.3 bits (65), Expect = 4.3
Identities = 14/61 (22%), Positives = 24/61 (39%)
Frame = +1
Query: 130 CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWVCKWQ 309
C +C + + C+ C F + KD +Y C N D +I C++Q
Sbjct: 139 CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNK-DCLIDKRQRNRCQYCRYQ 197
Query: 310 R 312
+
Sbjct: 198 K 198
>AF094517-1|AAC99409.1| 500|Homo sapiens nuclear receptor ERRB2
protein.
Length = 500
Score = 30.3 bits (65), Expect = 4.3
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = +1
Query: 70 IRCSIMSIETVPKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSN 249
I+C M + +PK L CLVC I + + C+ C F + + Y C +
Sbjct: 89 IKCEYM-LNAIPKRL-----CLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPAT 142
Query: 250 N 252
N
Sbjct: 143 N 143
>AC016543-1|AAG29619.1| 262|Homo sapiens hERRB2 protein.
Length = 262
Score = 30.3 bits (65), Expect = 4.3
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = +1
Query: 70 IRCSIMSIETVPKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSN 249
I+C M + +PK L CLVC I + + C+ C F + + Y C +
Sbjct: 89 IKCEYM-LNAIPKRL-----CLVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPAT 142
Query: 250 N 252
N
Sbjct: 143 N 143
>Z49826-1|CAA89990.2| 408|Homo sapiens hepatocyte nuclear factor 4
gamma (HNF4gamma) protein.
Length = 408
Score = 29.9 bits (64), Expect = 5.7
Identities = 11/37 (29%), Positives = 15/37 (40%)
Frame = +1
Query: 130 CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDC 240
C +C T + CD C F R K ++Y C
Sbjct: 12 CAICGDRATGKHYGASTCDGCKGFFRRSIRKSHIYSC 48
>M57707-1|AAA63254.1| 454|Homo sapiens retinoic acid receptor-gamma
protein.
Length = 454
Score = 29.9 bits (64), Expect = 5.7
Identities = 14/53 (26%), Positives = 22/53 (41%)
Frame = +1
Query: 82 IMSIETVPKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDC 240
+ S + P R + C VC+ + + C+ C F R K+ VY C
Sbjct: 74 VPSSPSPPPPPRVYKPCFVCNDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTC 126
>M38258-1|AAA60254.1| 454|Homo sapiens retinoic acid
receptor-gamma-1 protein.
Length = 454
Score = 29.9 bits (64), Expect = 5.7
Identities = 14/53 (26%), Positives = 22/53 (41%)
Frame = +1
Query: 82 IMSIETVPKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDC 240
+ S + P R + C VC+ + + C+ C F R K+ VY C
Sbjct: 74 VPSSPSPPPPPRVYKPCFVCNDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTC 126
>M24857-1|AAA52692.1| 454|Homo sapiens RARG protein.
Length = 454
Score = 29.9 bits (64), Expect = 5.7
Identities = 14/53 (26%), Positives = 22/53 (41%)
Frame = +1
Query: 82 IMSIETVPKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDC 240
+ S + P R + C VC+ + + C+ C F R K+ VY C
Sbjct: 74 VPSSPSPPPPPRVYKPCFVCNDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTC 126
>BC093729-1|AAH93729.1| 454|Homo sapiens retinoic acid receptor,
gamma protein.
Length = 454
Score = 29.9 bits (64), Expect = 5.7
Identities = 14/53 (26%), Positives = 22/53 (41%)
Frame = +1
Query: 82 IMSIETVPKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDC 240
+ S + P R + C VC+ + + C+ C F R K+ VY C
Sbjct: 74 VPSSPSPPPPPRVYKPCFVCNDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTC 126
>BC093727-1|AAH93727.1| 454|Homo sapiens retinoic acid receptor,
gamma protein.
Length = 454
Score = 29.9 bits (64), Expect = 5.7
Identities = 14/53 (26%), Positives = 22/53 (41%)
Frame = +1
Query: 82 IMSIETVPKELRGLRACLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDC 240
+ S + P R + C VC+ + + C+ C F R K+ VY C
Sbjct: 74 VPSSPSPPPPPRVYKPCFVCNDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTC 126
>AF133504-1|AAF00110.1| 408|Homo sapiens hepatocyte nuclear factor
4 gamma protein.
Length = 408
Score = 29.9 bits (64), Expect = 5.7
Identities = 11/37 (29%), Positives = 15/37 (40%)
Frame = +1
Query: 130 CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDC 240
C +C T + CD C F R K ++Y C
Sbjct: 12 CAICGDRATGKHYGASTCDGCKGFFRRSIRKSHIYSC 48
>BC000650-1|AAH00650.2| 403|Homo sapiens F-box protein 9 protein.
Length = 403
Score = 29.5 bits (63), Expect = 7.5
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -1
Query: 268 QSFHQSYYLCNHRHYLCYFSCEEIHHNCHSLHIQIGQMSLS 146
QSFH LC+ H + IHH+CH + G+ ++S
Sbjct: 337 QSFHVGLQLCSSGHQR-FNKLIWIHHSCHITYKSTGETAVS 376
>AY858798-1|AAW51115.1| 437|Homo sapiens cross-immune reaction
antigen protein.
Length = 437
Score = 29.5 bits (63), Expect = 7.5
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -1
Query: 268 QSFHQSYYLCNHRHYLCYFSCEEIHHNCHSLHIQIGQMSLS 146
QSFH LC+ H + IHH+CH + G+ ++S
Sbjct: 371 QSFHVGLQLCSSGHQR-FNKLIWIHHSCHITYKSTGETAVS 410
>AL031178-3|CAI20263.1| 447|Homo sapiens F-box protein 9 protein.
Length = 447
Score = 29.5 bits (63), Expect = 7.5
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -1
Query: 268 QSFHQSYYLCNHRHYLCYFSCEEIHHNCHSLHIQIGQMSLS 146
QSFH LC+ H + IHH+CH + G+ ++S
Sbjct: 381 QSFHVGLQLCSSGHQR-FNKLIWIHHSCHITYKSTGETAVS 420
>AL031178-2|CAI20262.1| 437|Homo sapiens F-box protein 9 protein.
Length = 437
Score = 29.5 bits (63), Expect = 7.5
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -1
Query: 268 QSFHQSYYLCNHRHYLCYFSCEEIHHNCHSLHIQIGQMSLS 146
QSFH LC+ H + IHH+CH + G+ ++S
Sbjct: 371 QSFHVGLQLCSSGHQR-FNKLIWIHHSCHITYKSTGETAVS 410
>AF176704-1|AAF03704.1| 447|Homo sapiens F-box protein FBX9
protein.
Length = 447
Score = 29.5 bits (63), Expect = 7.5
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -1
Query: 268 QSFHQSYYLCNHRHYLCYFSCEEIHHNCHSLHIQIGQMSLS 146
QSFH LC+ H + IHH+CH + G+ ++S
Sbjct: 381 QSFHVGLQLCSSGHQR-FNKLIWIHHSCHITYKSTGETAVS 420
>AF174597-1|AAF04518.1| 327|Homo sapiens F-box protein Fbx9
protein.
Length = 327
Score = 29.5 bits (63), Expect = 7.5
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -1
Query: 268 QSFHQSYYLCNHRHYLCYFSCEEIHHNCHSLHIQIGQMSLS 146
QSFH LC+ H + IHH+CH + G+ ++S
Sbjct: 261 QSFHVGLQLCSSGHQR-FNKLIWIHHSCHITYKSTGETAVS 300
>AB209833-1|BAD93070.1| 554|Homo sapiens F-box only protein 9
isoform 2 variant protein.
Length = 554
Score = 29.5 bits (63), Expect = 7.5
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -1
Query: 268 QSFHQSYYLCNHRHYLCYFSCEEIHHNCHSLHIQIGQMSLS 146
QSFH LC+ H + IHH+CH + G+ ++S
Sbjct: 488 QSFHVGLQLCSSGHQR-FNKLIWIHHSCHITYKSTGETAVS 527
>Y13276-1|CAA73725.1| 385|Homo sapiens Tailless protein protein.
Length = 385
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/44 (27%), Positives = 17/44 (38%)
Frame = +1
Query: 130 CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDG 261
C VC + + CD C F + ++ Y C S N G
Sbjct: 16 CKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQGG 59
>X52773-1|CAA36982.1| 462|Homo sapiens protein ( Human mRNA for
retinoic acid receptor-like protein. ).
Length = 462
Score = 29.1 bits (62), Expect = 9.9
Identities = 14/61 (22%), Positives = 23/61 (37%)
Frame = +1
Query: 130 CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWVCKWQ 309
C +C + + C+ C F + KD Y C N D +I C++Q
Sbjct: 135 CAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNK-DCLIDKRQRNRCQYCRYQ 193
Query: 310 R 312
+
Sbjct: 194 K 194
>U10990-1|AAC50118.1| 596|Homo sapiens hTAK1 protein.
Length = 596
Score = 29.1 bits (62), Expect = 9.9
Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
Frame = +1
Query: 130 CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWVCKWQ 309
C+VC + + C+ C F + K+ Y C SN ++N C++
Sbjct: 117 CVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSN----QDCIINKHHRNRCQFC 172
Query: 310 RISRFCK-GVYAISV-SGRLPAGVIREMKS 393
R+ + + G+ SV S R P V RE S
Sbjct: 173 RLKKCLEMGMKMESVQSERKPFDVQREKPS 202
>DQ303444-1|ABB96254.1| 452|Homo sapiens retinoid X receptor, alpha
protein.
Length = 452
Score = 29.1 bits (62), Expect = 9.9
Identities = 14/61 (22%), Positives = 23/61 (37%)
Frame = +1
Query: 130 CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWVCKWQ 309
C +C + + C+ C F + KD Y C N D +I C++Q
Sbjct: 125 CAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNK-DCLIDKRQRNRCQYCRYQ 183
Query: 310 R 312
+
Sbjct: 184 K 184
>BC110998-1|AAI10999.1| 462|Homo sapiens retinoid X receptor, alpha
protein.
Length = 462
Score = 29.1 bits (62), Expect = 9.9
Identities = 14/61 (22%), Positives = 23/61 (37%)
Frame = +1
Query: 130 CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWVCKWQ 309
C +C + + C+ C F + KD Y C N D +I C++Q
Sbjct: 135 CAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNK-DCLIDKRQRNRCQYCRYQ 193
Query: 310 R 312
+
Sbjct: 194 K 194
>BC063827-1|AAH63827.1| 516|Homo sapiens RXRA protein protein.
Length = 516
Score = 29.1 bits (62), Expect = 9.9
Identities = 14/61 (22%), Positives = 23/61 (37%)
Frame = +1
Query: 130 CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWVCKWQ 309
C +C + + C+ C F + KD Y C N D +I C++Q
Sbjct: 189 CAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNK-DCLIDKRQRNRCQYCRYQ 247
Query: 310 R 312
+
Sbjct: 248 K 248
>BC051670-1|AAH51670.1| 530|Homo sapiens NR2C2 protein protein.
Length = 530
Score = 29.1 bits (62), Expect = 9.9
Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
Frame = +1
Query: 130 CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWVCKWQ 309
C+VC + + C+ C F + K+ Y C SN ++N C++
Sbjct: 136 CVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSN----QDCIINKHHRNRCQFC 191
Query: 310 RISRFCK-GVYAISV-SGRLPAGVIREMKS 393
R+ + + G+ SV S R P V RE S
Sbjct: 192 RLKKCLEMGMKMESVQSKRKPFDVQREKPS 221
>BC028031-1|AAH28031.1| 385|Homo sapiens nuclear receptor subfamily
2, group E, member 1 protein.
Length = 385
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/44 (27%), Positives = 17/44 (38%)
Frame = +1
Query: 130 CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDG 261
C VC + + CD C F + ++ Y C S N G
Sbjct: 16 CKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQGG 59
>AL669970-1|CAM45733.1| 462|Homo sapiens retinoid X receptor, alpha
protein.
Length = 462
Score = 29.1 bits (62), Expect = 9.9
Identities = 14/61 (22%), Positives = 23/61 (37%)
Frame = +1
Query: 130 CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWVCKWQ 309
C +C + + C+ C F + KD Y C N D +I C++Q
Sbjct: 135 CAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNK-DCLIDKRQRNRCQYCRYQ 193
Query: 310 R 312
+
Sbjct: 194 K 194
>AL354796-1|CAH70571.1| 462|Homo sapiens retinoid X receptor, alpha
protein.
Length = 462
Score = 29.1 bits (62), Expect = 9.9
Identities = 14/61 (22%), Positives = 23/61 (37%)
Frame = +1
Query: 130 CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDGMIAVMNPEDSWVCKWQ 309
C +C + + C+ C F + KD Y C N D +I C++Q
Sbjct: 135 CAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNK-DCLIDKRQRNRCQYCRYQ 193
Query: 310 R 312
+
Sbjct: 194 K 194
>AL078596-2|CAO03480.1| 422|Homo sapiens nuclear receptor subfamily
2, group E, member 1 protein.
Length = 422
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/44 (27%), Positives = 17/44 (38%)
Frame = +1
Query: 130 CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDG 261
C VC + + CD C F + ++ Y C S N G
Sbjct: 53 CKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQGG 96
>AL078596-1|CAB75626.1| 385|Homo sapiens nuclear receptor subfamily
2, group E, member 1 protein.
Length = 385
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/44 (27%), Positives = 17/44 (38%)
Frame = +1
Query: 130 CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDG 261
C VC + + CD C F + ++ Y C S N G
Sbjct: 16 CKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQGG 59
>AK131541-1|BAD18677.1| 422|Homo sapiens protein ( Homo sapiens
cDNA FLJ16774 fis, clone BRCAN2019772, highly similar
to Orphan nuclear receptor NR2E1. ).
Length = 422
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/44 (27%), Positives = 17/44 (38%)
Frame = +1
Query: 130 CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDG 261
C VC + + CD C F + ++ Y C S N G
Sbjct: 53 CKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQGG 96
>AK094792-1|BAC04425.1| 477|Homo sapiens protein ( Homo sapiens
cDNA FLJ37473 fis, clone BRAWH2012540. ).
Length = 477
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +1
Query: 88 SIETVPKELRGLRACLVCSLIKTFDQFEYEGCDNCDEF 201
++E PK+L+G R +V K+F Q ++ C++C E+
Sbjct: 48 AMEVEPKKLKGKRDLIVP---KSFQQVDFWFCESCQEY 82
>AF411525-1|AAL05871.1| 385|Homo sapiens nuclear receptor subfamily
2 group E member 1 protein.
Length = 385
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/44 (27%), Positives = 17/44 (38%)
Frame = +1
Query: 130 CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDG 261
C VC + + CD C F + ++ Y C S N G
Sbjct: 16 CKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQGG 59
>AF275818-1|AAF87244.1| 504|Homo sapiens PR-domain containing
protein 11 protein.
Length = 504
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +1
Query: 88 SIETVPKELRGLRACLVCSLIKTFDQFEYEGCDNCDEF 201
++E PK+L+G R +V K+F Q ++ C++C E+
Sbjct: 75 AMEVEPKKLKGKRDLIVP---KSFQQVDFWFCESCQEY 109
>AF220532-1|AAG31945.1| 385|Homo sapiens orphan nuclear receptor
protein.
Length = 385
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/44 (27%), Positives = 17/44 (38%)
Frame = +1
Query: 130 CLVCSLIKTFDQFEYEGCDNCDEFLRMKSNKDNVYDCTSNNFDG 261
C VC + + CD C F + ++ Y C S N G
Sbjct: 16 CKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQGG 59
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,586,690
Number of Sequences: 237096
Number of extensions: 1553343
Number of successful extensions: 8094
Number of sequences better than 10.0: 90
Number of HSP's better than 10.0 without gapping: 7922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8092
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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