Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11f11
(951 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677 417 e-117
At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to GI:92... 417 e-117
At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to GI:92... 417 e-117
At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3) senescence... 417 e-117
At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3) senescence... 417 e-117
At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3) senescence... 417 e-117
At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3) senescence... 417 e-117
At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3) senescence... 417 e-117
At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to GI:3... 417 e-117
At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to GI:1... 417 e-117
At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to GI:1... 417 e-117
At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to GI:1... 417 e-117
At1g65350.1 68414.m07413 polyubiquitin, putative similar to poly... 407 e-114
At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to poly... 392 e-109
At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to polyu... 386 e-108
At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to polyu... 345 3e-95
At1g31340.1 68414.m03835 ubiquitin family protein contains INTER... 248 3e-66
At2g35635.1 68415.m04370 ubiquitin family protein contains INTER... 246 2e-65
At1g23410.1 68414.m02932 ubiquitin extension protein, putative /... 153 1e-37
At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / ... 153 2e-37
At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / ... 153 2e-37
At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / ... 152 3e-37
At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / ... 152 3e-37
At1g53950.1 68414.m06145 ubiquitin family protein contains INTER... 125 4e-29
At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam ... 120 1e-27
At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase fa... 96 3e-20
At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase fa... 96 3e-20
At1g11980.1 68414.m01384 ubiquitin family protein similar to Cha... 95 5e-20
At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase fa... 81 1e-15
At1g64470.1 68414.m07309 ubiquitin family protein contains INTER... 79 4e-15
At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative simi... 68 1e-11
At5g42220.1 68418.m05139 ubiquitin family protein contains INTER... 67 2e-11
At5g38470.1 68418.m04650 DNA repair protein RAD23, putative simi... 56 3e-08
At4g01000.1 68417.m00135 ubiquitin family protein low similarity... 56 5e-08
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit... 51 1e-06
At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquiti... 51 1e-06
At4g02970.1 68417.m00404 ubiquitin family protein contains INTER... 51 1e-06
At2g17190.1 68415.m01985 ubiquitin family protein contains INTER... 51 1e-06
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 50 2e-06
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 50 2e-06
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 50 2e-06
At3g13235.1 68416.m01666 ubiquitin family protein contains INTER... 50 3e-06
At1g53980.1 68414.m06149 polyubiquitin-related contains similari... 50 3e-06
At3g06455.1 68416.m00747 splicing factor-related contains weak s... 49 4e-06
At1g79650.3 68414.m09289 DNA repair protein RAD23, putative simi... 49 4e-06
At1g79650.2 68414.m09288 DNA repair protein RAD23, putative simi... 49 4e-06
At1g79650.1 68414.m09287 DNA repair protein RAD23, putative simi... 49 4e-06
At1g16190.1 68414.m01939 DNA repair protein RAD23, putative simi... 49 4e-06
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 49 5e-06
At4g03350.1 68417.m00457 ubiquitin family protein contains INTER... 48 9e-06
At4g03370.1 68417.m00459 ubiquitin family protein contains INTER... 47 2e-05
At4g05230.1 68417.m00789 ubiquitin family protein contains INTER... 45 9e-05
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ... 45 9e-05
At2g30100.1 68415.m03663 ubiquitin family protein low similarity... 42 5e-04
At5g16090.1 68418.m01880 ubiquitin family protein contains INTER... 42 6e-04
At4g03360.1 68417.m00458 ubiquitin family protein contains INTER... 40 0.002
At4g02950.1 68417.m00402 ubiquitin family protein contains INTER... 40 0.002
At4g05250.1 68417.m00793 ubiquitin family protein contains INTER... 39 0.006
At4g05310.1 68417.m00809 ubiquitin family protein contains INTER... 37 0.017
At4g05270.1 68417.m00797 ubiquitin family protein contains INTER... 37 0.017
At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp... 37 0.017
At5g14360.1 68418.m01678 ubiquitin family protein contains INTER... 36 0.030
At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase fa... 36 0.030
At5g40630.1 68418.m04932 ubiquitin family protein contains INTER... 34 0.12
At1g11970.1 68414.m01383 hypothetical protein 34 0.12
At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N domain-... 33 0.21
At4g03430.1 68417.m00470 pre-mRNA splicing factor-related simila... 31 0.85
At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almos... 31 1.5
At1g22050.1 68414.m02758 ubiquitin family protein contains INTER... 30 2.0
At1g03970.1 68414.m00383 G-box binding factor 4 (GBF4) identical... 29 3.4
At1g47680.1 68414.m05297 hypothetical protein 29 6.0
>At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677
Length = 382
Score = 417 bits (1027), Expect = e-117
Identities = 204/215 (94%), Positives = 212/215 (98%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 333 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 512
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 513 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 692
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKA
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180
Query: 693 KIQDKEGIPPDQQRLIFAGKQLEXGRTLSDYXIQK 797
KIQDKEGIPPDQQRLIFAGKQLE GRTL+DY IQK
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 215
Score = 417 bits (1027), Expect = e-117
Identities = 204/215 (94%), Positives = 212/215 (98%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 333 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 512
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 513 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 692
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKA
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 256
Query: 693 KIQDKEGIPPDQQRLIFAGKQLEXGRTLSDYXIQK 797
KIQDKEGIPPDQQRLIFAGKQLE GRTL+DY IQK
Sbjct: 257 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 291
Score = 417 bits (1027), Expect = e-117
Identities = 204/215 (94%), Positives = 212/215 (98%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 333 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 512
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272
Query: 513 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 692
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKA
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 332
Query: 693 KIQDKEGIPPDQQRLIFAGKQLEXGRTLSDYXIQK 797
KIQDKEGIPPDQQRLIFAGKQLE GRTL+DY IQK
Sbjct: 333 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 367
Score = 300 bits (736), Expect = 1e-81
Identities = 146/152 (96%), Positives = 151/152 (99%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 333 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 512
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 348
Query: 513 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 608
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 349 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 380
>At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 417 bits (1027), Expect = e-117
Identities = 204/215 (94%), Positives = 212/215 (98%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 333 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 512
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 513 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 692
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKA
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180
Query: 693 KIQDKEGIPPDQQRLIFAGKQLEXGRTLSDYXIQK 797
KIQDKEGIPPDQQRLIFAGKQLE GRTL+DY IQK
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 215
Score = 417 bits (1027), Expect = e-117
Identities = 204/215 (94%), Positives = 212/215 (98%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 333 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 512
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 513 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 692
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKA
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 256
Query: 693 KIQDKEGIPPDQQRLIFAGKQLEXGRTLSDYXIQK 797
KIQDKEGIPPDQQRLIFAGKQLE GRTL+DY IQK
Sbjct: 257 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 291
Score = 300 bits (736), Expect = 1e-81
Identities = 146/152 (96%), Positives = 151/152 (99%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 333 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 512
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272
Query: 513 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 608
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
>At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 417 bits (1027), Expect = e-117
Identities = 204/215 (94%), Positives = 212/215 (98%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 333 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 512
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 513 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 692
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKA
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180
Query: 693 KIQDKEGIPPDQQRLIFAGKQLEXGRTLSDYXIQK 797
KIQDKEGIPPDQQRLIFAGKQLE GRTL+DY IQK
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 215
Score = 417 bits (1027), Expect = e-117
Identities = 204/215 (94%), Positives = 212/215 (98%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 333 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 512
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 513 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 692
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKA
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 256
Query: 693 KIQDKEGIPPDQQRLIFAGKQLEXGRTLSDYXIQK 797
KIQDKEGIPPDQQRLIFAGKQLE GRTL+DY IQK
Sbjct: 257 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 291
Score = 300 bits (736), Expect = 1e-81
Identities = 146/152 (96%), Positives = 151/152 (99%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 333 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 512
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272
Query: 513 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 608
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
>At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 312
Score = 417 bits (1027), Expect = e-117
Identities = 204/215 (94%), Positives = 212/215 (98%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 333 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 512
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 513 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 692
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKA
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180
Query: 693 KIQDKEGIPPDQQRLIFAGKQLEXGRTLSDYXIQK 797
KIQDKEGIPPDQQRLIFAGKQLE GRTL+DY IQK
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 215
Score = 363 bits (893), Expect = e-101
Identities = 178/186 (95%), Positives = 185/186 (99%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 333 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 512
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 513 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 692
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKA
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 256
Query: 693 KIQDKE 710
KIQDKE
Sbjct: 257 KIQDKE 262
Score = 31.5 bits (68), Expect = 0.85
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +1
Query: 232 RRRSKTKKEFLLINSVSSLLASSWKTDAPCQTTTFKKNPHSILYCVFVEACRS 390
+ + + K+ FL +SVSS L SS + D TTT +++ CVFV +S
Sbjct: 255 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 307
Score = 31.5 bits (68), Expect = 0.85
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +1
Query: 460 RRRSKTKKEFLLINSVSSLLASSWKTDAPCQTTTFKKNPHSILYCVFVEACRS 618
+ + + K+ FL +SVSS L SS + D TTT +++ CVFV +S
Sbjct: 255 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 307
>At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 417 bits (1027), Expect = e-117
Identities = 204/215 (94%), Positives = 212/215 (98%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 333 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 512
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 513 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 692
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKA
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180
Query: 693 KIQDKEGIPPDQQRLIFAGKQLEXGRTLSDYXIQK 797
KIQDKEGIPPDQQRLIFAGKQLE GRTL+DY IQK
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 215
Score = 417 bits (1027), Expect = e-117
Identities = 204/215 (94%), Positives = 212/215 (98%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 333 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 512
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 513 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 692
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKA
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 256
Query: 693 KIQDKEGIPPDQQRLIFAGKQLEXGRTLSDYXIQK 797
KIQDKEGIPPDQQRLIFAGKQLE GRTL+DY IQK
Sbjct: 257 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 291
Score = 417 bits (1027), Expect = e-117
Identities = 204/215 (94%), Positives = 212/215 (98%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 333 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 512
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272
Query: 513 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 692
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKA
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 332
Query: 693 KIQDKEGIPPDQQRLIFAGKQLEXGRTLSDYXIQK 797
KIQDKEGIPPDQQRLIFAGKQLE GRTL+DY IQK
Sbjct: 333 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 367
Score = 363 bits (893), Expect = e-101
Identities = 178/186 (95%), Positives = 185/186 (99%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 333 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 512
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 348
Query: 513 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 692
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKA
Sbjct: 349 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 408
Query: 693 KIQDKE 710
KIQDKE
Sbjct: 409 KIQDKE 414
Score = 31.5 bits (68), Expect = 0.85
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +1
Query: 232 RRRSKTKKEFLLINSVSSLLASSWKTDAPCQTTTFKKNPHSILYCVFVEACRS 390
+ + + K+ FL +SVSS L SS + D TTT +++ CVFV +S
Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 459
Score = 31.5 bits (68), Expect = 0.85
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +1
Query: 460 RRRSKTKKEFLLINSVSSLLASSWKTDAPCQTTTFKKNPHSILYCVFVEACRS 618
+ + + K+ FL +SVSS L SS + D TTT +++ CVFV +S
Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 459
>At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 417 bits (1027), Expect = e-117
Identities = 204/215 (94%), Positives = 212/215 (98%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 333 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 512
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 513 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 692
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKA
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180
Query: 693 KIQDKEGIPPDQQRLIFAGKQLEXGRTLSDYXIQK 797
KIQDKEGIPPDQQRLIFAGKQLE GRTL+DY IQK
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 215
Score = 417 bits (1027), Expect = e-117
Identities = 204/215 (94%), Positives = 212/215 (98%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 333 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 512
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 513 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 692
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKA
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 256
Query: 693 KIQDKEGIPPDQQRLIFAGKQLEXGRTLSDYXIQK 797
KIQDKEGIPPDQQRLIFAGKQLE GRTL+DY IQK
Sbjct: 257 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 291
Score = 363 bits (893), Expect = e-101
Identities = 178/186 (95%), Positives = 185/186 (99%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 333 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 512
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272
Query: 513 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 692
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKA
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 332
Query: 693 KIQDKE 710
KIQDKE
Sbjct: 333 KIQDKE 338
Score = 31.5 bits (68), Expect = 0.85
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +1
Query: 232 RRRSKTKKEFLLINSVSSLLASSWKTDAPCQTTTFKKNPHSILYCVFVEACRS 390
+ + + K+ FL +SVSS L SS + D TTT +++ CVFV +S
Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 383
Score = 31.5 bits (68), Expect = 0.85
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +1
Query: 460 RRRSKTKKEFLLINSVSSLLASSWKTDAPCQTTTFKKNPHSILYCVFVEACRS 618
+ + + K+ FL +SVSS L SS + D TTT +++ CVFV +S
Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 383
>At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 417 bits (1027), Expect = e-117
Identities = 204/215 (94%), Positives = 212/215 (98%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 333 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 512
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 513 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 692
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKA
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180
Query: 693 KIQDKEGIPPDQQRLIFAGKQLEXGRTLSDYXIQK 797
KIQDKEGIPPDQQRLIFAGKQLE GRTL+DY IQK
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 215
Score = 417 bits (1027), Expect = e-117
Identities = 204/215 (94%), Positives = 212/215 (98%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 333 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 512
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 513 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 692
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKA
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 256
Query: 693 KIQDKEGIPPDQQRLIFAGKQLEXGRTLSDYXIQK 797
KIQDKEGIPPDQQRLIFAGKQLE GRTL+DY IQK
Sbjct: 257 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 291
Score = 417 bits (1027), Expect = e-117
Identities = 204/215 (94%), Positives = 212/215 (98%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 333 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 512
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272
Query: 513 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 692
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKA
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 332
Query: 693 KIQDKEGIPPDQQRLIFAGKQLEXGRTLSDYXIQK 797
KIQDKEGIPPDQQRLIFAGKQLE GRTL+DY IQK
Sbjct: 333 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 367
Score = 363 bits (893), Expect = e-101
Identities = 178/186 (95%), Positives = 185/186 (99%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 333 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 512
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 289 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 348
Query: 513 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 692
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKA
Sbjct: 349 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 408
Query: 693 KIQDKE 710
KIQDKE
Sbjct: 409 KIQDKE 414
Score = 31.5 bits (68), Expect = 0.85
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +1
Query: 232 RRRSKTKKEFLLINSVSSLLASSWKTDAPCQTTTFKKNPHSILYCVFVEACRS 390
+ + + K+ FL +SVSS L SS + D TTT +++ CVFV +S
Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 459
Score = 31.5 bits (68), Expect = 0.85
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +1
Query: 460 RRRSKTKKEFLLINSVSSLLASSWKTDAPCQTTTFKKNPHSILYCVFVEACRS 618
+ + + K+ FL +SVSS L SS + D TTT +++ CVFV +S
Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 459
>At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 417 bits (1027), Expect = e-117
Identities = 204/215 (94%), Positives = 212/215 (98%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 333 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 512
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 513 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 692
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKA
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180
Query: 693 KIQDKEGIPPDQQRLIFAGKQLEXGRTLSDYXIQK 797
KIQDKEGIPPDQQRLIFAGKQLE GRTL+DY IQK
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 215
Score = 417 bits (1027), Expect = e-117
Identities = 204/215 (94%), Positives = 212/215 (98%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 333 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 512
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 513 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 692
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKA
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 256
Query: 693 KIQDKEGIPPDQQRLIFAGKQLEXGRTLSDYXIQK 797
KIQDKEGIPPDQQRLIFAGKQLE GRTL+DY IQK
Sbjct: 257 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 291
Score = 363 bits (893), Expect = e-101
Identities = 178/186 (95%), Positives = 185/186 (99%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 333 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 512
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272
Query: 513 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 692
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKA
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 332
Query: 693 KIQDKE 710
KIQDKE
Sbjct: 333 KIQDKE 338
Score = 31.5 bits (68), Expect = 0.85
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +1
Query: 232 RRRSKTKKEFLLINSVSSLLASSWKTDAPCQTTTFKKNPHSILYCVFVEACRS 390
+ + + K+ FL +SVSS L SS + D TTT +++ CVFV +S
Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 383
Score = 31.5 bits (68), Expect = 0.85
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +1
Query: 460 RRRSKTKKEFLLINSVSSLLASSWKTDAPCQTTTFKKNPHSILYCVFVEACRS 618
+ + + K+ FL +SVSS L SS + D TTT +++ CVFV +S
Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVVVSKS 383
>At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to
GI:304117
Length = 229
Score = 417 bits (1027), Expect = e-117
Identities = 204/215 (94%), Positives = 212/215 (98%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 333 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 512
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 513 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 692
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKA
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180
Query: 693 KIQDKEGIPPDQQRLIFAGKQLEXGRTLSDYXIQK 797
KIQDKEGIPPDQQRLIFAGKQLE GRTL+DY IQK
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 215
Score = 300 bits (736), Expect = 1e-81
Identities = 146/152 (96%), Positives = 151/152 (99%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 333 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 512
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 513 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 608
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
>At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 417 bits (1027), Expect = e-117
Identities = 204/215 (94%), Positives = 212/215 (98%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 333 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 512
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 513 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 692
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKA
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180
Query: 693 KIQDKEGIPPDQQRLIFAGKQLEXGRTLSDYXIQK 797
KIQDKEGIPPDQQRLIFAGKQLE GRTL+DY IQK
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 215
Score = 417 bits (1027), Expect = e-117
Identities = 204/215 (94%), Positives = 212/215 (98%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 333 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 512
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 513 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 692
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKA
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 256
Query: 693 KIQDKEGIPPDQQRLIFAGKQLEXGRTLSDYXIQK 797
KIQDKEGIPPDQQRLIFAGKQLE GRTL+DY IQK
Sbjct: 257 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 291
Score = 300 bits (736), Expect = 1e-81
Identities = 146/152 (96%), Positives = 151/152 (99%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 333 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 512
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272
Query: 513 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 608
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
>At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 229
Score = 417 bits (1027), Expect = e-117
Identities = 204/215 (94%), Positives = 212/215 (98%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 333 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 512
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 513 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 692
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKA
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180
Query: 693 KIQDKEGIPPDQQRLIFAGKQLEXGRTLSDYXIQK 797
KIQDKEGIPPDQQRLIFAGKQLE GRTL+DY IQK
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 215
Score = 300 bits (736), Expect = 1e-81
Identities = 146/152 (96%), Positives = 151/152 (99%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 333 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 512
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 513 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 608
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
>At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 417 bits (1027), Expect = e-117
Identities = 204/215 (94%), Positives = 212/215 (98%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 333 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 512
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 513 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 692
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKA
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180
Query: 693 KIQDKEGIPPDQQRLIFAGKQLEXGRTLSDYXIQK 797
KIQDKEGIPPDQQRLIFAGKQLE GRTL+DY IQK
Sbjct: 181 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 215
Score = 417 bits (1027), Expect = e-117
Identities = 204/215 (94%), Positives = 212/215 (98%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 333 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 512
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196
Query: 513 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 692
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKA
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 256
Query: 693 KIQDKEGIPPDQQRLIFAGKQLEXGRTLSDYXIQK 797
KIQDKEGIPPDQQRLIFAGKQLE GRTL+DY IQK
Sbjct: 257 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 291
Score = 300 bits (736), Expect = 1e-81
Identities = 146/152 (96%), Positives = 151/152 (99%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 333 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 512
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 213 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 272
Query: 513 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 608
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 273 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
>At1g65350.1 68414.m07413 polyubiquitin, putative similar to
polyubiquitin GI:248337 from [Zea mays]
Length = 294
Score = 407 bits (1001), Expect = e-114
Identities = 202/215 (93%), Positives = 210/215 (97%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 333 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 512
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 120
Query: 513 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 692
FAGKQLEDGRTL+D NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKA
Sbjct: 121 FAGKQLEDGRTLAD-NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 179
Query: 693 KIQDKEGIPPDQQRLIFAGKQLEXGRTLSDYXIQK 797
KIQDKE IPPDQQRLIFAGKQLE GRTL+DY IQK
Sbjct: 180 KIQDKEWIPPDQQRLIFAGKQLEDGRTLADYNIQK 214
Score = 387 bits (953), Expect = e-108
Identities = 193/205 (94%), Positives = 200/205 (97%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+D N
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-N 135
Query: 333 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 512
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKE IPPDQQRLI
Sbjct: 136 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLI 195
Query: 513 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 692
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+S TI+NVKA
Sbjct: 196 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSGTIDNVKA 255
Query: 693 KIQDKEGIPPDQQRLIFAGKQLEXG 767
KIQDKEGIPPDQQRLIFAGKQLE G
Sbjct: 256 KIQDKEGIPPDQQRLIFAGKQLEGG 280
>At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to
polyubiquitin (ubq12) gene sequence GI:304121 from
[Arabidopsis thaliana]
Length = 230
Score = 392 bits (966), Expect = e-109
Identities = 191/215 (88%), Positives = 205/215 (95%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
MQIF+KTLTGKT LEVE SDTI+NVKAKIQD EGIPPDQ RLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFLKTLTGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYN 60
Query: 333 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 512
+Q++STLHL+LR RGGMQIFVKTLTGKTITLEVE+SDTI+N+KAKIQDKEGIPPDQQRLI
Sbjct: 61 VQEDSTLHLLLRFRGGMQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLI 120
Query: 513 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 692
FAGKQLEDGRTL+DYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKA
Sbjct: 121 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 180
Query: 693 KIQDKEGIPPDQQRLIFAGKQLEXGRTLSDYXIQK 797
KIQDKEGI PDQQRLIFAGKQ E GRTL+DY IQK
Sbjct: 181 KIQDKEGISPDQQRLIFAGKQHEDGRTLADYNIQK 215
Score = 293 bits (718), Expect = 1e-79
Identities = 143/152 (94%), Positives = 149/152 (98%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
MQIFVKTLTGKTITLEVE SDTI+N+KAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 333 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 512
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGI PDQQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGISPDQQRLI 196
Query: 513 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 608
FAGKQ EDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct: 197 FAGKQHEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 108 bits (259), Expect = 6e-24
Identities = 51/64 (79%), Positives = 58/64 (90%)
Frame = +3
Query: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEXGRTLSDYX 788
MQIF+KTLTGKT LEVE+SDTI+NVKAKIQD EGIPPDQ RLIFAGKQLE GRTL+DY
Sbjct: 1 MQIFLKTLTGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYN 60
Query: 789 IQKN 800
+Q++
Sbjct: 61 VQED 64
>At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to
polyubiquitin (ubq9) gene sequence GI:304120 from
[Arabidopsis thaliana]
Length = 322
Score = 386 bits (951), Expect = e-108
Identities = 192/216 (88%), Positives = 204/216 (94%), Gaps = 1/216 (0%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEG+PPDQQRLIFAGKQL+DGRTL+DYN
Sbjct: 79 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYN 138
Query: 333 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 512
IQKESTLHLVLRLRGGMQIFV+TLT KTI LEVE+SDT +NVKAKIQDKEGIPPDQQRLI
Sbjct: 139 IQKESTLHLVLRLRGGMQIFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRLI 198
Query: 513 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 692
FAGKQLEDGRTL+DYNIQKESTLHLVLRL GGMQIFV TLTGKTITLEVE+SDTI+NVKA
Sbjct: 199 FAGKQLEDGRTLADYNIQKESTLHLVLRLCGGMQIFVNTLTGKTITLEVESSDTIDNVKA 258
Query: 693 KIQDKEGIPPDQQRLIFAGKQLEXG-RTLSDYXIQK 797
KIQDKE I PDQQRLIFAG+QLE G TL+DY IQK
Sbjct: 259 KIQDKERIQPDQQRLIFAGEQLEDGYYTLADYNIQK 294
Score = 374 bits (920), Expect = e-104
Identities = 183/215 (85%), Positives = 199/215 (92%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
MQI KTLT KTIT++V SDTI NVKAKIQD EGIP DQQRLIF+GK L+DGRTL+DY+
Sbjct: 3 MQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADYS 62
Query: 333 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 512
IQK+S LHL LRLRGGMQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEG+PPDQQRLI
Sbjct: 63 IQKDSILHLALRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLI 122
Query: 513 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 692
FAGKQL+DGRTL+DYNIQKESTLHLVLRLRGGMQIFV+TLT KTI LEVE+SDT +NVKA
Sbjct: 123 FAGKQLDDGRTLADYNIQKESTLHLVLRLRGGMQIFVRTLTRKTIALEVESSDTTDNVKA 182
Query: 693 KIQDKEGIPPDQQRLIFAGKQLEXGRTLSDYXIQK 797
KIQDKEGIPPDQQRLIFAGKQLE GRTL+DY IQK
Sbjct: 183 KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQK 217
Score = 271 bits (664), Expect = 5e-73
Identities = 136/153 (88%), Positives = 143/153 (93%), Gaps = 1/153 (0%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
MQIFV+TLT KTI LEVE SDT +NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 155 MQIFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 214
Query: 333 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 512
IQKESTLHLVLRL GGMQIFV TLTGKTITLEVE+SDTI+NVKAKIQDKE I PDQQRLI
Sbjct: 215 IQKESTLHLVLRLCGGMQIFVNTLTGKTITLEVESSDTIDNVKAKIQDKERIQPDQQRLI 274
Query: 513 FAGKQLEDGR-TLSDYNIQKESTLHLVLRLRGG 608
FAG+QLEDG TL+DYNIQKESTLHLVLRLRGG
Sbjct: 275 FAGEQLEDGYYTLADYNIQKESTLHLVLRLRGG 307
Score = 96.3 bits (229), Expect = 3e-20
Identities = 47/66 (71%), Positives = 55/66 (83%)
Frame = +3
Query: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEXGRTLSDYX 788
MQI KTLT KTIT++V +SDTI NVKAKIQD EGIP DQQRLIF+GK L+ GRTL+DY
Sbjct: 3 MQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLADYS 62
Query: 789 IQKNPL 806
IQK+ +
Sbjct: 63 IQKDSI 68
>At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to
polyubiquitin (ubq8) GI:870793, GB:L05917 [Arabidopsis
thaliana] (Genetics 139 (2), 921-939 (1995))
Length = 631
Score = 345 bits (848), Expect = 3e-95
Identities = 176/221 (79%), Positives = 197/221 (89%), Gaps = 7/221 (3%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
+QI+ KTLT KTITL+VE SD+I NVKAKIQ+KEGIP DQQRLIFAGKQLEDG TL+DYN
Sbjct: 3 IQIYAKTLTEKTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADYN 62
Query: 333 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 512
IQKESTLHLVLRLRGGMQIFV+TLTGKTITLEV++SDTI+NVKAKIQDKEGI P QQRLI
Sbjct: 63 IQKESTLHLVLRLRGGMQIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLI 122
Query: 513 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGK-----TITLEVEASDTI 677
FAGKQLEDGRTL+DYNIQKESTLHLVLRL GGMQIFV T +GK T+TL+VE+SDTI
Sbjct: 123 FAGKQLEDGRTLADYNIQKESTLHLVLRLCGGMQIFVSTFSGKNFTSDTLTLKVESSDTI 182
Query: 678 ENVKAKIQDKEGIPPDQQRLIFAGKQL--EXGRTLSDYXIQ 794
ENVKAKIQD+EG+ PD QRLIF G++L E RTL+DY I+
Sbjct: 183 ENVKAKIQDREGLRPDHQRLIFHGEELFTEDNRTLADYGIR 223
Score = 294 bits (722), Expect = 5e-80
Identities = 161/248 (64%), Positives = 179/248 (72%), Gaps = 7/248 (2%)
Frame = +3
Query: 102 LFDIQLTKRNYCIF*IIMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 281
L D + K + + MQIFVK GK ITLEV SDTI++VKAKIQDK G PPDQQ L
Sbjct: 376 LADYSIQKESTLHLVLGMQIFVKLFGGKIITLEVLSSDTIKSVKAKIQDKVGSPPDQQIL 435
Query: 282 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL-------TGKTITLEVEAS 440
+F G QL+DGRTL DYNI+ ESTLHL +R GMQIFVKT T KTITLEVE+S
Sbjct: 436 LFRGGQLQDGRTLGDYNIRNESTLHLFFHIRHGMQIFVKTFSFSGETPTCKTITLEVESS 495
Query: 441 DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF 620
DTI+NVK KIQ K GIP D+QRLIF G+ L RTL DYNIQK ST+H + RGGMQIF
Sbjct: 496 DTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGSRTLLDYNIQKGSTIHQLFLQRGGMQIF 555
Query: 621 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEXGRTLSDYXIQKN 800
+KTLTGKTI LEVE+SDTI NVK KIQ KEGI PDQQ LIF G+QLE G TL DY I K
Sbjct: 556 IKTLTGKTIILEVESSDTIANVKEKIQVKEGIKPDQQMLIFFGQQLEDGVTLGDYDIHKK 615
Query: 801 PLSILYCV 824
S LY V
Sbjct: 616 --STLYLV 621
Score = 283 bits (695), Expect = 9e-77
Identities = 155/224 (69%), Positives = 171/224 (76%), Gaps = 9/224 (4%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ--QRLIFAGKQLEDGRTLSD 326
MQIFVKTLT K I LEVE DTIENVKA +QDKEGI P QRLIF GK+L+DG TL+D
Sbjct: 319 MQIFVKTLTRKRINLEVESWDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELKDGCTLAD 378
Query: 327 YNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQR 506
Y+IQKESTLHLVL GMQIFVK GK ITLEV +SDTI++VKAKIQDK G PPDQQ
Sbjct: 379 YSIQKESTLHLVL----GMQIFVKLFGGKIITLEVLSSDTIKSVKAKIQDKVGSPPDQQI 434
Query: 507 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL-------TGKTITLEVEA 665
L+F G QL+DGRTL DYNI+ ESTLHL +R GMQIFVKT T KTITLEVE+
Sbjct: 435 LLFRGGQLQDGRTLGDYNIRNESTLHLFFHIRHGMQIFVKTFSFSGETPTCKTITLEVES 494
Query: 666 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEXGRTLSDYXIQK 797
SDTI+NVK KIQ K GIP D+QRLIF G+ L RTL DY IQK
Sbjct: 495 SDTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGSRTLLDYNIQK 538
Score = 279 bits (685), Expect = 1e-75
Identities = 154/229 (67%), Positives = 175/229 (76%), Gaps = 14/229 (6%)
Frame = +3
Query: 153 MQIFVKTLTGK-----TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL--EDG 311
MQIFV T +GK T+TL+VE SDTIENVKAKIQD+EG+ PD QRLIF G++L ED
Sbjct: 155 MQIFVSTFSGKNFTSDTLTLKVESSDTIENVKAKIQDREGLRPDHQRLIFHGEELFTEDN 214
Query: 312 RTLSDYNIQKESTLHLVLRLRGGMQIFVKTL-----TGKTITLEVEASDTIENVKAKIQD 476
RTL+DY I+ STL L LRLRG M IFVK L TG+ LEVE+SDTI+NVKAK+QD
Sbjct: 215 RTLADYGIRNRSTLCLALRLRGDMYIFVKNLPYNSFTGENFILEVESSDTIDNVKAKLQD 274
Query: 477 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE 656
KE IP D RLIFAGK LE GRTL+ YNIQK STL+LV R R GMQIFVKTLT K I LE
Sbjct: 275 KERIPMDLHRLIFAGKPLEGGRTLAHYNIQKGSTLYLVTRFRCGMQIFVKTLTRKRINLE 334
Query: 657 VEASDTIENVKAKIQDKEGI--PPDQQRLIFAGKQLEXGRTLSDYXIQK 797
VE+ DTIENVKA +QDKEGI P+ QRLIF GK+L+ G TL+DY IQK
Sbjct: 335 VESWDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELKDGCTLADYSIQK 383
Score = 238 bits (583), Expect = 3e-63
Identities = 118/139 (84%), Positives = 129/139 (92%)
Frame = +3
Query: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 560
+QI+ KTLT KTITL+VE SD+I NVKAKIQ+KEGIP DQQRLIFAGKQLEDG TL+DYN
Sbjct: 3 IQIYAKTLTEKTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADYN 62
Query: 561 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 740
IQKESTLHLVLRLRGGMQIFV+TLTGKTITLEV++SDTI+NVKAKIQDKEGI P QQRLI
Sbjct: 63 IQKESTLHLVLRLRGGMQIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLI 122
Query: 741 FAGKQLEXGRTLSDYXIQK 797
FAGKQLE GRTL+DY IQK
Sbjct: 123 FAGKQLEDGRTLADYNIQK 141
Score = 208 bits (507), Expect = 5e-54
Identities = 111/157 (70%), Positives = 122/157 (77%), Gaps = 7/157 (4%)
Frame = +3
Query: 153 MQIFVKTL-------TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 311
MQIFVKT T KTITLEVE SDTI+NVK KIQ K GIP D+QRLIF G+ L
Sbjct: 469 MQIFVKTFSFSGETPTCKTITLEVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGS 528
Query: 312 RTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 491
RTL DYNIQK ST+H + RGGMQIF+KTLTGKTI LEVE+SDTI NVK KIQ KEGI
Sbjct: 529 RTLLDYNIQKGSTIHQLFLQRGGMQIFIKTLTGKTIILEVESSDTIANVKEKIQVKEGIK 588
Query: 492 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 602
PDQQ LIF G+QLEDG TL DY+I K+STL+LVLRLR
Sbjct: 589 PDQQMLIFFGQQLEDGVTLGDYDIHKKSTLYLVLRLR 625
>At1g31340.1 68414.m03835 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 156
Score = 248 bits (608), Expect = 3e-66
Identities = 119/152 (78%), Positives = 134/152 (88%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 333 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 512
IQKESTLHLVLRLRGG I VKTLTGK I +++E +DTI+ +K ++++KEGIPP QQRLI
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
Query: 513 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 608
+AGKQL D +T DYNI+ S LHLVL LRGG
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 152
Score = 226 bits (553), Expect = 1e-59
Identities = 110/148 (74%), Positives = 128/148 (86%)
Frame = +3
Query: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 560
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 561 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 740
IQKESTLHLVLRLRGG I VKTLTGK I +++E +DTI+ +K ++++KEGIPP QQRLI
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
Query: 741 FAGKQLEXGRTLSDYXIQKNPLSILYCV 824
+AGKQL +T DY I+ S+L+ V
Sbjct: 121 YAGKQLADDKTAKDYNIEGG--SVLHLV 146
>At2g35635.1 68415.m04370 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 154
Score = 246 bits (602), Expect = 2e-65
Identities = 118/153 (77%), Positives = 134/153 (87%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 333 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 512
IQKESTLHLVLRLRGG I VKTLTGK I +++E +DTI+ +K ++++KEGIPP QQRLI
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
Query: 513 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 611
+AGKQL D +T DY I+ S LHLVL LRGG+
Sbjct: 121 YAGKQLADDKTAKDYAIEGGSVLHLVLALRGGL 153
Score = 226 bits (553), Expect = 1e-59
Identities = 110/148 (74%), Positives = 128/148 (86%)
Frame = +3
Query: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 560
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 561 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 740
IQKESTLHLVLRLRGG I VKTLTGK I +++E +DTI+ +K ++++KEGIPP QQRLI
Sbjct: 61 IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
Query: 741 FAGKQLEXGRTLSDYXIQKNPLSILYCV 824
+AGKQL +T DY I+ S+L+ V
Sbjct: 121 YAGKQLADDKTAKDYAIEGG--SVLHLV 146
>At1g23410.1 68414.m02932 ubiquitin extension protein, putative /
40S ribosomal protein S27A (RPS27aA) strong similarity
to ubiquitin extension protein (UBQ5) GB:AAA32906
GI:166934 from (Arabidopsis thaliana)
Length = 156
Score = 153 bits (372), Expect = 1e-37
Identities = 80/106 (75%), Positives = 86/106 (81%)
Frame = +3
Query: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 560
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 561 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 698
IQKESTLHLVLRLRGG K KT T + T + VK +
Sbjct: 61 IQKESTLHLVLRLRGG----AKKRKKKTYTKPKKIKHTHKKVKLAV 102
Score = 153 bits (370), Expect = 2e-37
Identities = 80/106 (75%), Positives = 85/106 (80%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 333 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 470
IQKESTLHLVLRLRGG K KT T + T + VK +
Sbjct: 61 IQKESTLHLVLRLRGG----AKKRKKKTYTKPKKIKHTHKKVKLAV 102
Score = 121 bits (291), Expect = 8e-28
Identities = 58/63 (92%), Positives = 61/63 (96%)
Frame = +3
Query: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEXGRTLSDYX 788
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE GRTL+DY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 789 IQK 797
IQK
Sbjct: 61 IQK 63
>At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / 60S
ribosomal protein L40 (RPL40B) identical to GI:166929,
GI:166930
Length = 128
Score = 153 bits (370), Expect = 2e-37
Identities = 73/77 (94%), Positives = 77/77 (100%)
Frame = +3
Query: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 560
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 561 IQKESTLHLVLRLRGGM 611
IQKESTLHLVLRLRGG+
Sbjct: 61 IQKESTLHLVLRLRGGI 77
Score = 152 bits (368), Expect = 4e-37
Identities = 73/77 (94%), Positives = 76/77 (98%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 333 IQKESTLHLVLRLRGGM 383
IQKESTLHLVLRLRGG+
Sbjct: 61 IQKESTLHLVLRLRGGI 77
Score = 121 bits (291), Expect = 8e-28
Identities = 58/63 (92%), Positives = 61/63 (96%)
Frame = +3
Query: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEXGRTLSDYX 788
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE GRTL+DY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 789 IQK 797
IQK
Sbjct: 61 IQK 63
>At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / 60S
ribosomal protein L40 (RPL40A) identical to GI:166930,
GI:166931
Length = 128
Score = 153 bits (370), Expect = 2e-37
Identities = 73/77 (94%), Positives = 77/77 (100%)
Frame = +3
Query: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 560
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 561 IQKESTLHLVLRLRGGM 611
IQKESTLHLVLRLRGG+
Sbjct: 61 IQKESTLHLVLRLRGGI 77
Score = 152 bits (368), Expect = 4e-37
Identities = 73/77 (94%), Positives = 76/77 (98%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 333 IQKESTLHLVLRLRGGM 383
IQKESTLHLVLRLRGG+
Sbjct: 61 IQKESTLHLVLRLRGGI 77
Score = 121 bits (291), Expect = 8e-28
Identities = 58/63 (92%), Positives = 61/63 (96%)
Frame = +3
Query: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEXGRTLSDYX 788
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE GRTL+DY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 789 IQK 797
IQK
Sbjct: 61 IQK 63
>At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / 40S
ribosomal protein S27A (RPS27aC) identical to GI:166933,
GI:166934
Length = 157
Score = 152 bits (369), Expect = 3e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 560
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 561 IQKESTLHLVLRLRGG 608
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 151 bits (367), Expect = 5e-37
Identities = 73/76 (96%), Positives = 75/76 (98%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 333 IQKESTLHLVLRLRGG 380
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 121 bits (291), Expect = 8e-28
Identities = 58/63 (92%), Positives = 61/63 (96%)
Frame = +3
Query: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEXGRTLSDYX 788
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE GRTL+DY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 789 IQK 797
IQK
Sbjct: 61 IQK 63
>At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / 40S
ribosomal protein S27A (RPS27aB) identical to GI:166936
Length = 157
Score = 152 bits (369), Expect = 3e-37
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = +3
Query: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 560
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 561 IQKESTLHLVLRLRGG 608
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 151 bits (367), Expect = 5e-37
Identities = 73/76 (96%), Positives = 75/76 (98%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 333 IQKESTLHLVLRLRGG 380
IQKESTLHLVLRLRGG
Sbjct: 61 IQKESTLHLVLRLRGG 76
Score = 121 bits (291), Expect = 8e-28
Identities = 58/63 (92%), Positives = 61/63 (96%)
Frame = +3
Query: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEXGRTLSDYX 788
MQIFVKTLTGKTITLEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE GRTL+DY
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 789 IQK 797
IQK
Sbjct: 61 IQK 63
>At1g53950.1 68414.m06145 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 216
Score = 125 bits (302), Expect = 4e-29
Identities = 74/159 (46%), Positives = 98/159 (61%), Gaps = 15/159 (9%)
Frame = +3
Query: 150 IMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK----------- 296
IM IF+KTLTG+T T EV+ SDTI +KAK ++KEGIP +QQRLIF G+
Sbjct: 49 IMMIFIKTLTGRTNTYEVKGSDTIRELKAKHEEKEGIPVEQQRLIFQGRISIKTVKGKSI 108
Query: 297 --QLEDGRTLSDYNIQKESTLHLVLRLRGG--MQIFVKTLTGKTITLEVEASDTIENVKA 464
++ D D I E T LVLRL M+IFV T+ KT LEV+ SDTI+ +K+
Sbjct: 109 NLEVADSSDTIDLKINGEPTRQLVLRLGPAVLMRIFVSTIKEKTFILEVKGSDTIKKLKS 168
Query: 465 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 581
I D+ G P DQQ L G +L++ T+SDYNI+ ++ L
Sbjct: 169 MIHDQGGPPVDQQDLNHLGTKLKNNATISDYNIKPDANL 207
Score = 122 bits (295), Expect = 3e-28
Identities = 81/187 (43%), Positives = 105/187 (56%), Gaps = 21/187 (11%)
Frame = +3
Query: 297 QLEDGRTLSDYNIQKESTLHLVLRLR-----GG-MQIFVKTLTGKTITLEVEASDTIENV 458
++ED D I E T LV+ L G M IF+KTLTG+T T EV+ SDTI +
Sbjct: 16 EVEDSSNTIDLKIHGEPTRELVVDLSPTPDTGAIMMIFIKTLTGRTNTYEVKGSDTIREL 75
Query: 459 KAKIQDKEGIPPDQQRLIFAGK-------------QLEDGRTLSDYNIQKESTLHLVLRL 599
KAK ++KEGIP +QQRLIF G+ ++ D D I E T LVLRL
Sbjct: 76 KAKHEEKEGIPVEQQRLIFQGRISIKTVKGKSINLEVADSSDTIDLKINGEPTRQLVLRL 135
Query: 600 RGG--MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEXGRT 773
M+IFV T+ KT LEV+ SDTI+ +K+ I D+ G P DQQ L G +L+ T
Sbjct: 136 GPAVLMRIFVSTIKEKTFILEVKGSDTIKKLKSMIHDQGGPPVDQQDLNHLGTKLKNNAT 195
Query: 774 LSDYXIQ 794
+SDY I+
Sbjct: 196 ISDYNIK 202
Score = 67.7 bits (158), Expect = 1e-11
Identities = 32/69 (46%), Positives = 48/69 (69%)
Frame = +3
Query: 147 IIMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 326
++M+IFV T+ KT LEV+ SDTI+ +K+ I D+ G P DQQ L G +L++ T+SD
Sbjct: 139 VLMRIFVSTIKEKTFILEVKGSDTIKKLKSMIHDQGGPPVDQQDLNHLGTKLKNNATISD 198
Query: 327 YNIQKESTL 353
YNI+ ++ L
Sbjct: 199 YNIKPDANL 207
Score = 31.9 bits (69), Expect = 0.64
Identities = 40/122 (32%), Positives = 59/122 (48%), Gaps = 22/122 (18%)
Frame = +3
Query: 381 MQIFVKTLTGKTITLEVE-ASDTI------ENVKAKIQDKEGIPPDQQRLIFAGKQLEDG 539
M I +KTL GK I LEVE +S+TI E + + D P ++ K L G
Sbjct: 1 MHISIKTLEGKRIKLEVEDSSNTIDLKIHGEPTRELVVDLSPTPDTGAIMMIFIKTL-TG 59
Query: 540 RTLSDYNIQKESTLHLV--------------LRLRGGMQIFVKTLTGKTITLEV-EASDT 674
RT + Y ++ T+ + RL +I +KT+ GK+I LEV ++SDT
Sbjct: 60 RT-NTYEVKGSDTIRELKAKHEEKEGIPVEQQRLIFQGRISIKTVKGKSINLEVADSSDT 118
Query: 675 IE 680
I+
Sbjct: 119 ID 120
>At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam
profile: PF00240 ubiquitin family
Length = 158
Score = 120 bits (289), Expect = 1e-27
Identities = 74/158 (46%), Positives = 94/158 (59%), Gaps = 16/158 (10%)
Frame = +3
Query: 174 LTGKT-ITLEVEPSDTIE-NVKAKIQDKEGIPPD--QQRLIFAGKQLEDGRTLSDYNIQK 341
+ GKT I LEV+ S T+ + + IPPD +++ D T+ + +
Sbjct: 1 MDGKTRINLEVDSSKTVNLKIDEDPTISQNIPPDILHGKVMHLSINTVDKNTMINLEVDS 60
Query: 342 ESTLHLVL--RLRGG----------MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG 485
T+ L + GG M IF+KTLTG+ I LEVE DTIEN+KAKIQDK+G
Sbjct: 61 SKTIDLNIGENPTGGYNGPDFRHEVMFIFIKTLTGRRIVLEVENCDTIENIKAKIQDKQG 120
Query: 486 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 599
IP DQQRLIF GKQLEDG TL+DYNIQ +S LHL+ RL
Sbjct: 121 IPVDQQRLIFKGKQLEDGLTLADYNIQNDSILHLIKRL 158
Score = 117 bits (281), Expect = 1e-26
Identities = 55/74 (74%), Positives = 63/74 (85%)
Frame = +3
Query: 150 IMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 329
+M IF+KTLTG+ I LEVE DTIEN+KAKIQDK+GIP DQQRLIF GKQLEDG TL+DY
Sbjct: 85 VMFIFIKTLTGRRIVLEVENCDTIENIKAKIQDKQGIPVDQQRLIFKGKQLEDGLTLADY 144
Query: 330 NIQKESTLHLVLRL 371
NIQ +S LHL+ RL
Sbjct: 145 NIQNDSILHLIKRL 158
Score = 104 bits (250), Expect = 8e-23
Identities = 69/157 (43%), Positives = 91/157 (57%), Gaps = 16/157 (10%)
Frame = +3
Query: 402 LTGKT-ITLEVEASDTIE-NVKAKIQDKEGIPPD--QQRLIFAGKQLEDGRTLSDYNIQK 569
+ GKT I LEV++S T+ + + IPPD +++ D T+ + +
Sbjct: 1 MDGKTRINLEVDSSKTVNLKIDEDPTISQNIPPDILHGKVMHLSINTVDKNTMINLEVDS 60
Query: 570 ESTLHLVL--RLRGG----------MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG 713
T+ L + GG M IF+KTLTG+ I LEVE DTIEN+KAKIQDK+G
Sbjct: 61 SKTIDLNIGENPTGGYNGPDFRHEVMFIFIKTLTGRRIVLEVENCDTIENIKAKIQDKQG 120
Query: 714 IPPDQQRLIFAGKQLEXGRTLSDYXIQKNPLSILYCV 824
IP DQQRLIF GKQLE G TL+DY IQ + SIL+ +
Sbjct: 121 IPVDQQRLIFKGKQLEDGLTLADYNIQND--SILHLI 155
>At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 95.9 bits (228), Expect = 3e-20
Identities = 53/145 (36%), Positives = 80/145 (55%), Gaps = 3/145 (2%)
Frame = +3
Query: 171 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKES 347
TL G I + V SD+IE+VK +IQ G Q+L+F G++L + DY + + +
Sbjct: 40 TLPGSVIPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGN 99
Query: 348 TLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAG 521
LHLVL+L + VKT GK VE I VK +I K G + PD+Q +++ G
Sbjct: 100 ILHLVLKLSDLQVLDVKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEG 159
Query: 522 KQLEDGRTLSDYNIQKESTLHLVLR 596
++LED ++D +S LHL++R
Sbjct: 160 EKLEDQSLINDICRNDDSVLHLLVR 184
Score = 86.2 bits (204), Expect = 3e-17
Identities = 51/143 (35%), Positives = 78/143 (54%), Gaps = 3/143 (2%)
Frame = +3
Query: 399 TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKES 575
TL G I + V SD+IE+VK +IQ G Q+L+F G++L + DY + + +
Sbjct: 40 TLPGSVIPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGN 99
Query: 576 TLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAG 749
LHLVL+L + VKT GK VE I VK +I K G + PD+Q +++ G
Sbjct: 100 ILHLVLKLSDLQVLDVKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEG 159
Query: 750 KQLEXGRTLSDYXIQKNPLSILY 818
++LE ++D I +N S+L+
Sbjct: 160 EKLEDQSLIND--ICRNDDSVLH 180
>At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 95.9 bits (228), Expect = 3e-20
Identities = 53/145 (36%), Positives = 80/145 (55%), Gaps = 3/145 (2%)
Frame = +3
Query: 171 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKES 347
TL G I + V SD+IE+VK +IQ G Q+L+F G++L + DY + + +
Sbjct: 40 TLPGSVIPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGN 99
Query: 348 TLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAG 521
LHLVL+L + VKT GK VE I VK +I K G + PD+Q +++ G
Sbjct: 100 ILHLVLKLSDLQVLDVKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEG 159
Query: 522 KQLEDGRTLSDYNIQKESTLHLVLR 596
++LED ++D +S LHL++R
Sbjct: 160 EKLEDQSLINDICRNDDSVLHLLVR 184
Score = 86.2 bits (204), Expect = 3e-17
Identities = 51/143 (35%), Positives = 78/143 (54%), Gaps = 3/143 (2%)
Frame = +3
Query: 399 TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKES 575
TL G I + V SD+IE+VK +IQ G Q+L+F G++L + DY + + +
Sbjct: 40 TLPGSVIPMRVLESDSIESVKLRIQSYRGFVVRNQKLVFGGRELARSNSNMRDYGVSEGN 99
Query: 576 TLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAG 749
LHLVL+L + VKT GK VE I VK +I K G + PD+Q +++ G
Sbjct: 100 ILHLVLKLSDLQVLDVKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEG 159
Query: 750 KQLEXGRTLSDYXIQKNPLSILY 818
++LE ++D I +N S+L+
Sbjct: 160 EKLEDQSLIND--ICRNDDSVLH 180
>At1g11980.1 68414.m01384 ubiquitin family protein similar to Chain
A, Structure Of Ubiquitin-Like Protein, Rub1 GI:6729726
from [Arabidopsis thaliana]
Length = 78
Score = 95.5 bits (227), Expect = 5e-20
Identities = 43/76 (56%), Positives = 57/76 (75%)
Frame = +3
Query: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 560
M+I VKTLT K I +E+E +DTIE +K +I++KEGIPP QR+++ GKQL D T YN
Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYN 60
Query: 561 IQKESTLHLVLRLRGG 608
+++ S LHLVL LRGG
Sbjct: 61 LERGSVLHLVLALRGG 76
Score = 94.7 bits (225), Expect = 8e-20
Identities = 43/76 (56%), Positives = 57/76 (75%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
M+I VKTLT K I +E+E +DTIE +K +I++KEGIPP QR+++ GKQL D T YN
Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYN 60
Query: 333 IQKESTLHLVLRLRGG 380
+++ S LHLVL LRGG
Sbjct: 61 LERGSVLHLVLALRGG 76
Score = 72.5 bits (170), Expect = 4e-13
Identities = 34/72 (47%), Positives = 50/72 (69%)
Frame = +3
Query: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEXGRTLSDYX 788
M+I VKTLT K I +E+E +DTIE +K +I++KEGIPP QR+++ GKQL T Y
Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYN 60
Query: 789 IQKNPLSILYCV 824
+++ S+L+ V
Sbjct: 61 LERG--SVLHLV 70
>At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain, Pfam profile
PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 574
Score = 80.6 bits (190), Expect = 1e-15
Identities = 49/145 (33%), Positives = 80/145 (55%), Gaps = 4/145 (2%)
Frame = +3
Query: 171 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE-DGRTLSDYNIQKES 347
T+ G I V SD+I +VK +IQ +G +Q+L++ G+++ + + DY +
Sbjct: 38 TIAGSVIPKRVMESDSIASVKLRIQSIKGFFVKKQKLLYDGREVSRNDSQIRDYGLADGK 97
Query: 348 TLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE---GIPPDQQRLIFA 518
LHLV+RL I V+T+ GK L VE S + VK +I KE GIP D + L
Sbjct: 98 LLHLVIRLSDLQAISVRTVDGKEFELVVERSRNVGYVKQQIASKEKELGIPRDHE-LTLD 156
Query: 519 GKQLEDGRTLSDYNIQKESTLHLVL 593
G++L+D R ++D ++ +HL++
Sbjct: 157 GEELDDQRLITDLCQNGDNVIHLLI 181
Score = 73.3 bits (172), Expect = 2e-13
Identities = 46/132 (34%), Positives = 72/132 (54%), Gaps = 4/132 (3%)
Frame = +3
Query: 399 TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE-DGRTLSDYNIQKES 575
T+ G I V SD+I +VK +IQ +G +Q+L++ G+++ + + DY +
Sbjct: 38 TIAGSVIPKRVMESDSIASVKLRIQSIKGFFVKKQKLLYDGREVSRNDSQIRDYGLADGK 97
Query: 576 TLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE---GIPPDQQRLIFA 746
LHLV+RL I V+T+ GK L VE S + VK +I KE GIP D + L
Sbjct: 98 LLHLVIRLSDLQAISVRTVDGKEFELVVERSRNVGYVKQQIASKEKELGIPRDHE-LTLD 156
Query: 747 GKQLEXGRTLSD 782
G++L+ R ++D
Sbjct: 157 GEELDDQRLITD 168
>At1g64470.1 68414.m07309 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 213
Score = 79.0 bits (186), Expect = 4e-15
Identities = 49/167 (29%), Positives = 89/167 (53%), Gaps = 5/167 (2%)
Frame = +3
Query: 171 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKES 347
+++G T+ + + SD+I VK +IQ G +Q+L+F+G++L + + DY + S
Sbjct: 40 SVSGSTMPMLILESDSIAEVKLRIQTCNGFRVRRQKLVFSGRELARNASRVKDYGVTGGS 99
Query: 348 TLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI-QDKEGIPP-DQQRLIFAG 521
LHLVL+L + + V T GK V+ + +K +I ++ +G P D Q ++F G
Sbjct: 100 VLHLVLKLYDPLLVTVITTCGKVFQFHVDRRRNVGYLKKRISKEGKGFPEVDDQEILFKG 159
Query: 522 KQLEDGRTLSDYNIQKESTLHLVLR--LRGGMQIFVKTLTGKTITLE 656
++L+D R + S +HL+++ + ++ T TGK LE
Sbjct: 160 EKLDDNRIIDGICKDGNSVIHLLVKKSVEDTVKREEDTATGKDSLLE 206
Score = 70.1 bits (164), Expect = 2e-12
Identities = 39/129 (30%), Positives = 72/129 (55%), Gaps = 3/129 (2%)
Frame = +3
Query: 399 TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQL-EDGRTLSDYNIQKES 575
+++G T+ + + SD+I VK +IQ G +Q+L+F+G++L + + DY + S
Sbjct: 40 SVSGSTMPMLILESDSIAEVKLRIQTCNGFRVRRQKLVFSGRELARNASRVKDYGVTGGS 99
Query: 576 TLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI-QDKEGIPP-DQQRLIFAG 749
LHLVL+L + + V T GK V+ + +K +I ++ +G P D Q ++F G
Sbjct: 100 VLHLVLKLYDPLLVTVITTCGKVFQFHVDRRRNVGYLKKRISKEGKGFPEVDDQEILFKG 159
Query: 750 KQLEXGRTL 776
++L+ R +
Sbjct: 160 EKLDDNRII 168
>At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative similar
to SP|P39940 Ubiquitin--protein ligase RSP5 (EC 6.3.2.-)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00240: Ubiquitin family, PF00632: HECT-domain
(ubiquitin-transferase)
Length = 873
Score = 67.7 bits (158), Expect = 1e-11
Identities = 41/132 (31%), Positives = 77/132 (58%), Gaps = 1/132 (0%)
Frame = +3
Query: 210 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQI 389
++++E +K + D + + Q+ + + + E+ R+LS S RL QI
Sbjct: 42 AESLEMLKKQEIDADHMAASAQQTLISWRSGENSRSLSSSGECSSSNRPESTRL----QI 97
Query: 390 FVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 566
FV+ ++G KTI + E DT+E + +I+ K IP +QR+I+ GKQL+ +L+ Y+I+
Sbjct: 98 FVRMMSGGKTIVIHAEKYDTVEKLHQRIEWKTKIPALEQRVIYKGKQLQRENSLTYYSIE 157
Query: 567 KESTLHLVLRLR 602
++++L LV R++
Sbjct: 158 QDASLQLVARMQ 169
Score = 62.9 bits (146), Expect = 3e-10
Identities = 30/75 (40%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Frame = +3
Query: 153 MQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 329
+QIFV+ ++G KTI + E DT+E + +I+ K IP +QR+I+ GKQL+ +L+ Y
Sbjct: 95 LQIFVRMMSGGKTIVIHAEKYDTVEKLHQRIEWKTKIPALEQRVIYKGKQLQRENSLTYY 154
Query: 330 NIQKESTLHLVLRLR 374
+I+++++L LV R++
Sbjct: 155 SIEQDASLQLVARMQ 169
Score = 59.3 bits (137), Expect = 4e-09
Identities = 38/125 (30%), Positives = 69/125 (55%), Gaps = 1/125 (0%)
Frame = +3
Query: 429 VEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 608
V ++++E +K + D + + Q+ + + + E+ R+LS S RL
Sbjct: 39 VGVAESLEMLKKQEIDADHMAASAQQTLISWRSGENSRSLSSSGECSSSNRPESTRL--- 95
Query: 609 MQIFVKTLTG-KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEXGRTLSDY 785
QIFV+ ++G KTI + E DT+E + +I+ K IP +QR+I+ GKQL+ +L+ Y
Sbjct: 96 -QIFVRMMSGGKTIVIHAEKYDTVEKLHQRIEWKTKIPALEQRVIYKGKQLQRENSLTYY 154
Query: 786 XIQKN 800
I+++
Sbjct: 155 SIEQD 159
>At5g42220.1 68418.m05139 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 879
Score = 66.9 bits (156), Expect = 2e-11
Identities = 29/72 (40%), Positives = 48/72 (66%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
+++ +KTL +T T +V ++T+ K KI + G+P QQRLIF G+ L+D LS+Y+
Sbjct: 24 LELNIKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSEYH 83
Query: 333 IQKESTLHLVLR 368
++ TLHL++R
Sbjct: 84 LENGHTLHLIVR 95
Score = 66.9 bits (156), Expect = 2e-11
Identities = 29/72 (40%), Positives = 48/72 (66%)
Frame = +3
Query: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 560
+++ +KTL +T T +V ++T+ K KI + G+P QQRLIF G+ L+D LS+Y+
Sbjct: 24 LELNIKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSEYH 83
Query: 561 IQKESTLHLVLR 596
++ TLHL++R
Sbjct: 84 LENGHTLHLIVR 95
Score = 52.4 bits (120), Expect = 4e-07
Identities = 23/62 (37%), Positives = 39/62 (62%)
Frame = +3
Query: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEXGRTLSDYX 788
+++ +KTL +T T +V ++T+ K KI + G+P QQRLIF G+ L+ LS+Y
Sbjct: 24 LELNIKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSEYH 83
Query: 789 IQ 794
++
Sbjct: 84 LE 85
>At5g38470.1 68418.m04650 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform I GI:1914683 from [Daucus carota]
Length = 378
Score = 56.4 bits (130), Expect = 3e-08
Identities = 29/73 (39%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 326
M+IFVKTL+G +EV+P+D + +VK I+ +G P +Q LI GK L+D TL +
Sbjct: 1 MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAEYPAAKQMLIHQGKVLKDETTLEE 60
Query: 327 YNIQKESTLHLVL 365
N+ + S + ++L
Sbjct: 61 NNVVENSFIVIML 73
Score = 53.2 bits (122), Expect = 2e-07
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Frame = +3
Query: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSD 554
M+IFVKTL+G +EV+ +D + +VK I+ +G P +Q LI GK L+D TL +
Sbjct: 1 MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAEYPAAKQMLIHQGKVLKDETTLEE 60
Query: 555 YNIQKESTLHLVL 593
N+ + S + ++L
Sbjct: 61 NNVVENSFIVIML 73
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Frame = +3
Query: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEXGRTLSD 782
M+IFVKTL+G +EV+ +D + +VK I+ +G P +Q LI GK L+ TL +
Sbjct: 1 MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAEYPAAKQMLIHQGKVLKDETTLEE 60
Query: 783 YXIQKNPLSIL 815
+ +N ++
Sbjct: 61 NNVVENSFIVI 71
>At4g01000.1 68417.m00135 ubiquitin family protein low similarity to
SP|P13117 Ubiquitin. {Neurospora crassa}; contains Pfam
profile PF00240: Ubiquitin family
Length = 415
Score = 55.6 bits (128), Expect = 5e-08
Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVE-PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 329
+Q FV+ L GK++TL P E +K +I ++ IP QRLI G Q+ DG +S
Sbjct: 9 LQFFVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQRLISGGYQISDGSAIS-- 66
Query: 330 NIQKESTLHLVLRLRGGMQIFVKTLTG 410
Q ++T++LVL LRGG F L G
Sbjct: 67 --QPDATVNLVLSLRGGKGGFGSLLRG 91
Score = 54.8 bits (126), Expect = 8e-08
Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Frame = +3
Query: 381 MQIFVKTLTGKTITLEVEASDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 557
+Q FV+ L GK++TL + E +K +I ++ IP QRLI G Q+ DG +S
Sbjct: 9 LQFFVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQRLISGGYQISDGSAIS-- 66
Query: 558 NIQKESTLHLVLRLRGGMQIFVKTLTG 638
Q ++T++LVL LRGG F L G
Sbjct: 67 --QPDATVNLVLSLRGGKGGFGSLLRG 91
Score = 38.7 bits (86), Expect = 0.006
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +3
Query: 609 MQIFVKTLTGKTITLEVEASDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEXGRTLS 779
+Q FV+ L GK++TL + E +K +I ++ IP QRLI G Q+ G +S
Sbjct: 9 LQFFVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQRLISGGYQISDGSAIS 66
>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
GI:9937505; contains Pfam profiles PF00240: Ubiquitin
family, PF00627: UBA/TS-N domain
Length = 551
Score = 51.2 bits (117), Expect = 1e-06
Identities = 20/66 (30%), Positives = 38/66 (57%)
Frame = +3
Query: 393 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 572
++ G +++ T+E+ K + +P +QQRLI+ G+ L+D +TL Y +Q +
Sbjct: 22 IRCSNGTKFSVKTSLDSTVESFKELVAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 573 STLHLV 590
T+H+V
Sbjct: 82 HTIHMV 87
Score = 50.4 bits (115), Expect = 2e-06
Identities = 20/66 (30%), Positives = 38/66 (57%)
Frame = +3
Query: 165 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 344
++ G +++ T+E+ K + +P +QQRLI+ G+ L+D +TL Y +Q +
Sbjct: 22 IRCSNGTKFSVKTSLDSTVESFKELVAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 345 STLHLV 362
T+H+V
Sbjct: 82 HTIHMV 87
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = +3
Query: 621 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEXGRTLSDYXIQ 794
++ G +++ T+E+ K + +P +QQRLI+ G+ L+ +TL Y +Q
Sbjct: 22 IRCSNGTKFSVKTSLDSTVESFKELVAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQ 79
>At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquitin
SP:P42740 from [Aglaothamnion neglectum]
Length = 79
Score = 50.8 bits (116), Expect = 1e-06
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK---QLEDGRTLS 323
MQ+F+ GK +EVE + TI ++K KI D G+ Q L GK ++ G T+
Sbjct: 1 MQVFIIDEDGKKYCVEVEKTTTIADMKTKIYDATGMENAYQYLEHRGKIVLEVHGGTTMD 60
Query: 324 DYNIQKESTLHLVLRLRGG 380
DY I+ H+ R+RGG
Sbjct: 61 DYKIKACDIFHMSDRMRGG 79
Score = 50.8 bits (116), Expect = 1e-06
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Frame = +3
Query: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK---QLEDGRTLS 551
MQ+F+ GK +EVE + TI ++K KI D G+ Q L GK ++ G T+
Sbjct: 1 MQVFIIDEDGKKYCVEVEKTTTIADMKTKIYDATGMENAYQYLEHRGKIVLEVHGGTTMD 60
Query: 552 DYNIQKESTLHLVLRLRGG 608
DY I+ H+ R+RGG
Sbjct: 61 DYKIKACDIFHMSDRMRGG 79
Score = 41.5 bits (93), Expect = 8e-04
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Frame = +3
Query: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK---QLEXGRTLS 779
MQ+F+ GK +EVE + TI ++K KI D G+ Q L GK ++ G T+
Sbjct: 1 MQVFIIDEDGKKYCVEVEKTTTIADMKTKIYDATGMENAYQYLEHRGKIVLEVHGGTTMD 60
Query: 780 DYXIQ 794
DY I+
Sbjct: 61 DYKIK 65
>At4g02970.1 68417.m00404 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 270
Score = 50.8 bits (116), Expect = 1e-06
Identities = 25/69 (36%), Positives = 39/69 (56%)
Frame = +3
Query: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 560
M +++ T TG + ++ ++ +T+ +K KI+ +GIP +Q L GK LED DY
Sbjct: 1 MNVYIDTETGSSFSITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 561 IQKESTLHL 587
I ES L L
Sbjct: 61 ILFESRLLL 69
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/69 (36%), Positives = 39/69 (56%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
M +++ T TG + ++ ++ +T+ +K KI+ +GIP +Q L GK LED DY
Sbjct: 1 MNVYIDTETGSSFSITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 333 IQKESTLHL 359
I ES L L
Sbjct: 61 ILFESRLLL 69
Score = 45.2 bits (102), Expect = 6e-05
Identities = 20/61 (32%), Positives = 34/61 (55%)
Frame = +3
Query: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEXGRTLSDYX 788
M +++ T TG + ++ ++ +T+ +K KI+ +GIP +Q L GK LE DY
Sbjct: 1 MNVYIDTETGSSFSITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 789 I 791
I
Sbjct: 61 I 61
>At2g17190.1 68415.m01985 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 538
Score = 50.8 bits (116), Expect = 1e-06
Identities = 22/72 (30%), Positives = 40/72 (55%)
Frame = +3
Query: 147 IIMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 326
+ + + V+ G ++ T+E+ K I +P +QQRLI+ G+ L+D +TL
Sbjct: 16 VAVAVNVRCSNGTKFSVTTSLDSTVESFKELIAQNSDVPANQQRLIYKGRILKDDQTLLS 75
Query: 327 YNIQKESTLHLV 362
Y +Q + T+H+V
Sbjct: 76 YGLQADHTVHMV 87
Score = 50.8 bits (116), Expect = 1e-06
Identities = 22/66 (33%), Positives = 37/66 (56%)
Frame = +3
Query: 393 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 572
V+ G ++ T+E+ K I +P +QQRLI+ G+ L+D +TL Y +Q +
Sbjct: 22 VRCSNGTKFSVTTSLDSTVESFKELIAQNSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 573 STLHLV 590
T+H+V
Sbjct: 82 HTVHMV 87
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +3
Query: 621 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEXGRTLSDYXIQ 794
V+ G ++ T+E+ K I +P +QQRLI+ G+ L+ +TL Y +Q
Sbjct: 22 VRCSNGTKFSVTTSLDSTVESFKELIAQNSDVPANQQRLIYKGRILKDDQTLLSYGLQ 79
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 50.4 bits (115), Expect = 2e-06
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 323
M+IFVKTL G +EV+P D++ +VK I+ +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 324 DYNIQKESTLHLVL 365
+ + + S + +++
Sbjct: 61 ENKVAENSFIVIMM 74
Score = 47.2 bits (107), Expect = 2e-05
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Frame = +3
Query: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 551
M+IFVKTL G +EV+ D++ +VK I+ +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 552 DYNIQKESTLHLVL 593
+ + + S + +++
Sbjct: 61 ENKVAENSFIVIMM 74
Score = 44.8 bits (101), Expect = 9e-05
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Frame = +3
Query: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEXGRTLS 779
M+IFVKTL G +EV+ D++ +VK I+ +G P +Q LI GK L+ T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 780 DYXIQKNPLSIL 815
+ + +N ++
Sbjct: 61 ENKVAENSFIVI 72
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 50.4 bits (115), Expect = 2e-06
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 323
M+IFVKTL G +EV+P D++ +VK I+ +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 324 DYNIQKESTLHLVL 365
+ + + S + +++
Sbjct: 61 ENKVAENSFIVIMM 74
Score = 47.2 bits (107), Expect = 2e-05
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Frame = +3
Query: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 551
M+IFVKTL G +EV+ D++ +VK I+ +G P +Q LI GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 552 DYNIQKESTLHLVL 593
+ + + S + +++
Sbjct: 61 ENKVAENSFIVIMM 74
Score = 44.8 bits (101), Expect = 9e-05
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Frame = +3
Query: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEXGRTLS 779
M+IFVKTL G +EV+ D++ +VK I+ +G P +Q LI GK L+ T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 780 DYXIQKNPLSIL 815
+ + +N ++
Sbjct: 61 ENKVAENSFIVI 72
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240:
Ubiquitin family
Length = 1919
Score = 50.4 bits (115), Expect = 2e-06
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = +3
Query: 363 LRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDG 539
L RG M+I VK+L GK L V +++ +++AK K + ++ + GK+L+D
Sbjct: 655 LPTRGSMKIIVKSLGGKGSKLHVGIEESVSSLRAKASRKLDFKETEAVKMFYKGKELDDE 714
Query: 540 RTLSDYNIQKESTLHLV 590
++L+ N+Q S +HL+
Sbjct: 715 KSLAAQNVQPNSLVHLI 731
Score = 44.8 bits (101), Expect = 9e-05
Identities = 22/71 (30%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSDY 329
M+I VK+L GK L V +++ +++AK K + ++ + GK+L+D ++L+
Sbjct: 661 MKIIVKSLGGKGSKLHVGIEESVSSLRAKASRKLDFKETEAVKMFYKGKELDDEKSLAAQ 720
Query: 330 NIQKESTLHLV 362
N+Q S +HL+
Sbjct: 721 NVQPNSLVHLI 731
>At3g13235.1 68416.m01666 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 414
Score = 49.6 bits (113), Expect = 3e-06
Identities = 22/71 (30%), Positives = 45/71 (63%)
Frame = +3
Query: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 560
M+I V T + ITL+V++ +T+ENVKA ++ + +P QQ+L++ G ++ + LS
Sbjct: 1 MRITVMTAGEQIITLDVDSQETVENVKALLEVESNVPIQQQQLLYNGNEMGNSDKLSALG 60
Query: 561 IQKESTLHLVL 593
++ + L +++
Sbjct: 61 VKDDDLLMMMV 71
Score = 48.8 bits (111), Expect = 5e-06
Identities = 22/71 (30%), Positives = 44/71 (61%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
M+I V T + ITL+V+ +T+ENVKA ++ + +P QQ+L++ G ++ + LS
Sbjct: 1 MRITVMTAGEQIITLDVDSQETVENVKALLEVESNVPIQQQQLLYNGNEMGNSDKLSALG 60
Query: 333 IQKESTLHLVL 365
++ + L +++
Sbjct: 61 VKDDDLLMMMV 71
Score = 47.6 bits (108), Expect = 1e-05
Identities = 22/69 (31%), Positives = 43/69 (62%)
Frame = +3
Query: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEXGRTLSDYX 788
M+I V T + ITL+V++ +T+ENVKA ++ + +P QQ+L++ G ++ LS
Sbjct: 1 MRITVMTAGEQIITLDVDSQETVENVKALLEVESNVPIQQQQLLYNGNEMGNSDKLSALG 60
Query: 789 IQKNPLSIL 815
++ + L ++
Sbjct: 61 VKDDDLLMM 69
>At1g53980.1 68414.m06149 polyubiquitin-related contains similarity
to polyubiquitin GI:166336 from (Aglaothamnion
neglectum)
Length = 91
Score = 49.6 bits (113), Expect = 3e-06
Identities = 32/71 (45%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Frame = +3
Query: 297 QLEDGRTLSDYNIQKESTLHLVLRLRGG-----MQIFVKTLTGKTITLEVEASDTIENVK 461
+LED D I E T LVL L G M IFV TL GKT LEV+ S+ I+ VK
Sbjct: 16 ELEDSSETIDIKIHAEPTRQLVLGLGQGPQGEMMSIFVSTLKGKTFNLEVKGSEIIQQVK 75
Query: 462 AKIQDKEGIPP 494
I D+ +PP
Sbjct: 76 NMIHDQ--VPP 84
Score = 49.6 bits (113), Expect = 3e-06
Identities = 32/71 (45%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Frame = +3
Query: 525 QLEDGRTLSDYNIQKESTLHLVLRLRGG-----MQIFVKTLTGKTITLEVEASDTIENVK 689
+LED D I E T LVL L G M IFV TL GKT LEV+ S+ I+ VK
Sbjct: 16 ELEDSSETIDIKIHAEPTRQLVLGLGQGPQGEMMSIFVSTLKGKTFNLEVKGSEIIQQVK 75
Query: 690 AKIQDKEGIPP 722
I D+ +PP
Sbjct: 76 NMIHDQ--VPP 84
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +3
Query: 150 IMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 266
+M IFV TL GKT LEV+ S+ I+ VK I D+ +PP
Sbjct: 48 MMSIFVSTLKGKTFNLEVKGSEIIQQVKNMIHDQ--VPP 84
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/25 (56%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +3
Query: 609 MQIFVKTLTGKTITLEVE-ASDTIE 680
M+I +KT GKTI LE+E +S+TI+
Sbjct: 1 MKILIKTEKGKTINLELEDSSETID 25
>At3g06455.1 68416.m00747 splicing factor-related contains weak
similarity to Swiss-Prot:Q12874 splicing factor 3A
subunit 3 (Spliceosome associated protein 61, SAP 61,
SF3a60) [Homo sapiens]
Length = 366
Score = 49.2 bits (112), Expect = 4e-06
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVE-PSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 329
+Q FV+ L GK++TL P E +K +I ++ IP QRLI G Q+ +S
Sbjct: 9 LQFFVRLLDGKSVTLTFSSPIACGEQIKQRIFEQTKIPTHLQRLISGGFQIPGASAIS-- 66
Query: 330 NIQKESTLHLVLRLRGG 380
Q ++T++LVL LRGG
Sbjct: 67 --QSDTTMNLVLSLRGG 81
Score = 48.4 bits (110), Expect = 7e-06
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +3
Query: 381 MQIFVKTLTGKTITLEVEASDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 557
+Q FV+ L GK++TL + E +K +I ++ IP QRLI G Q+ +S
Sbjct: 9 LQFFVRLLDGKSVTLTFSSPIACGEQIKQRIFEQTKIPTHLQRLISGGFQIPGASAIS-- 66
Query: 558 NIQKESTLHLVLRLRGG 608
Q ++T++LVL LRGG
Sbjct: 67 --QSDTTMNLVLSLRGG 81
Score = 35.9 bits (79), Expect = 0.039
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +3
Query: 609 MQIFVKTLTGKTITLEVEASDTI-ENVKAKIQDKEGIPPDQQRLIFAGKQLEXGRTLS 779
+Q FV+ L GK++TL + E +K +I ++ IP QRLI G Q+ +S
Sbjct: 9 LQFFVRLLDGKSVTLTFSSPIACGEQIKQRIFEQTKIPTHLQRLISGGFQIPGASAIS 66
>At1g79650.3 68414.m09289 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 351
Score = 49.2 bits (112), Expect = 4e-06
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 323
M++ VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 324 DYNIQKESTLHLVL 365
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
Score = 46.0 bits (104), Expect = 4e-05
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +3
Query: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 551
M++ VKTL G + V SDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 552 DYNIQKESTLHLVL 593
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
Score = 38.7 bits (86), Expect = 0.006
Identities = 25/59 (42%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = +3
Query: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEXGRTL 776
M++ VKTL G + V SDTI VK I+D +G P QQ LI GK L+ +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSL 59
>At1g79650.2 68414.m09288 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 365
Score = 49.2 bits (112), Expect = 4e-06
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 323
M++ VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 324 DYNIQKESTLHLVL 365
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
Score = 46.0 bits (104), Expect = 4e-05
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +3
Query: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 551
M++ VKTL G + V SDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 552 DYNIQKESTLHLVL 593
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
Score = 38.7 bits (86), Expect = 0.006
Identities = 25/59 (42%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = +3
Query: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEXGRTL 776
M++ VKTL G + V SDTI VK I+D +G P QQ LI GK L+ +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSL 59
>At1g79650.1 68414.m09287 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 371
Score = 49.2 bits (112), Expect = 4e-06
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 323
M++ VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 324 DYNIQKESTLHLVL 365
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
Score = 46.0 bits (104), Expect = 4e-05
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +3
Query: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 551
M++ VKTL G + V SDTI VK I+D +G P QQ LI GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 552 DYNIQKESTLHLVL 593
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
Score = 38.7 bits (86), Expect = 0.006
Identities = 25/59 (42%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = +3
Query: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEXGRTL 776
M++ VKTL G + V SDTI VK I+D +G P QQ LI GK L+ +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSL 59
>At1g16190.1 68414.m01939 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota]
Length = 368
Score = 49.2 bits (112), Expect = 4e-06
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 323
M++ VKTL G + V P+DTI VK I+D K+ P QQ LI GK L+D TL
Sbjct: 1 MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60
Query: 324 DYNIQKESTLHLVL 365
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
Score = 46.0 bits (104), Expect = 4e-05
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 3/74 (4%)
Frame = +3
Query: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEDGRTLS 551
M++ VKTL G + V +DTI VK I+D K+ P QQ LI GK L+D TL
Sbjct: 1 MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60
Query: 552 DYNIQKESTLHLVL 593
+ + +E L ++L
Sbjct: 61 ENKVTEEGFLVVML 74
Score = 38.7 bits (86), Expect = 0.006
Identities = 25/59 (42%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = +3
Query: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQD---KEGIPPDQQRLIFAGKQLEXGRTL 776
M++ VKTL G + V +DTI VK I+D K+ P QQ LI GK L+ TL
Sbjct: 1 MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTL 59
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 48.8 bits (111), Expect = 5e-06
Identities = 26/72 (36%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Frame = +3
Query: 150 IMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSD 326
+++I +K L T TL VE + + ++K I G+ P++Q RL+F G+ L++ + LSD
Sbjct: 10 LIRIKIKILHSTTHTLSVERTIPVRDLKQDICYYCGVSPERQPRLLFRGRVLKNDQRLSD 69
Query: 327 YNIQKESTLHLV 362
Y++++ TL+LV
Sbjct: 70 YHVEEGHTLYLV 81
Score = 48.4 bits (110), Expect = 7e-06
Identities = 26/71 (36%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Frame = +3
Query: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSDY 557
++I +K L T TL VE + + ++K I G+ P++Q RL+F G+ L++ + LSDY
Sbjct: 11 IRIKIKILHSTTHTLSVERTIPVRDLKQDICYYCGVSPERQPRLLFRGRVLKNDQRLSDY 70
Query: 558 NIQKESTLHLV 590
++++ TL+LV
Sbjct: 71 HVEEGHTLYLV 81
Score = 40.3 bits (90), Expect = 0.002
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Frame = +3
Query: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEXGRTLSDY 785
++I +K L T TL VE + + ++K I G+ P++Q RL+F G+ L+ + LSDY
Sbjct: 11 IRIKIKILHSTTHTLSVERTIPVRDLKQDICYYCGVSPERQPRLLFRGRVLKNDQRLSDY 70
Query: 786 XIQK 797
+++
Sbjct: 71 HVEE 74
>At4g03350.1 68417.m00457 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 263
Score = 48.0 bits (109), Expect = 9e-06
Identities = 24/67 (35%), Positives = 37/67 (55%)
Frame = +3
Query: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 560
M + + T TG + ++ ++ +T+ +K KI+ +GIP +Q L GK LED DY
Sbjct: 1 MNVDIDTETGSSFSITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 561 IQKESTL 581
I ES L
Sbjct: 61 ILFESLL 67
Score = 47.2 bits (107), Expect = 2e-05
Identities = 24/67 (35%), Positives = 37/67 (55%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
M + + T TG + ++ ++ +T+ +K KI+ +GIP +Q L GK LED DY
Sbjct: 1 MNVDIDTETGSSFSITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 333 IQKESTL 353
I ES L
Sbjct: 61 ILFESLL 67
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = +3
Query: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEXGRTLSDYX 788
M + + T TG + ++ ++ +T+ +K KI+ +GIP +Q L GK LE DY
Sbjct: 1 MNVDIDTETGSSFSITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 789 I 791
I
Sbjct: 61 I 61
>At4g03370.1 68417.m00459 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 295
Score = 47.2 bits (107), Expect = 2e-05
Identities = 22/69 (31%), Positives = 40/69 (57%)
Frame = +3
Query: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 560
M++ V+ +G T ++++ DT+ K KI+ + IP +Q + F GK LED + +++
Sbjct: 1 MKMTVENESGSTFSIDIGLQDTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWD 60
Query: 561 IQKESTLHL 587
I + LHL
Sbjct: 61 ILQNPLLHL 69
Score = 46.4 bits (105), Expect = 3e-05
Identities = 22/69 (31%), Positives = 40/69 (57%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
M++ V+ +G T ++++ DT+ K KI+ + IP +Q + F GK LED + +++
Sbjct: 1 MKMTVENESGSTFSIDIGLQDTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWD 60
Query: 333 IQKESTLHL 359
I + LHL
Sbjct: 61 ILQNPLLHL 69
>At4g05230.1 68417.m00789 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 206
Score = 44.8 bits (101), Expect = 9e-05
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Frame = +3
Query: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 560
M +F +T +G T +E+ DT+ +K KI+ + IP +Q L+F G L+D +
Sbjct: 1 MDVFFETRSGSTFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQDHLDIEQCV 60
Query: 561 IQKESTLHLVL----RLRGGMQIF 620
I S + L + + R +Q+F
Sbjct: 61 ILNHSRIQLSISSPDQSRNNIQVF 84
Score = 44.4 bits (100), Expect = 1e-04
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 332
M +F +T +G T +E+ DT+ +K KI+ + IP +Q L+F G L+D +
Sbjct: 1 MDVFFETRSGSTFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQDHLDIEQCV 60
Query: 333 IQKESTLHLVL----RLRGGMQIF 392
I S + L + + R +Q+F
Sbjct: 61 ILNHSRIQLSISSPDQSRNNIQVF 84
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/51 (35%), Positives = 30/51 (58%)
Frame = +3
Query: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 761
M +F +T +G T +E+ DT+ +K KI+ + IP +Q L+F G L+
Sbjct: 1 MDVFFETRSGSTFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQ 51
>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
bromodomain-containing protein low similarity to
SP|P51123 Transcription initiation factor TFIID 230 kDa
subunit {Drosophila melanogaster}; contains Pfam
profiles: PF00439 bromodomain, PF00240: Ubiquitin family
Length = 1700
Score = 44.8 bits (101), Expect = 9e-05
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Frame = +3
Query: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSDY 557
M+I + L GK L V +++ ++KAK K + ++ + GK+LED ++L++
Sbjct: 500 MKIKLSNLGGKGSLLTVGREESVSSLKAKASRKLDFKETEAVKMFYMGKELEDEKSLAEQ 559
Query: 558 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITL 653
N+Q S +HL LR + + + + L G+ +L
Sbjct: 560 NVQPNSLVHL-LRTKVHLWPWAQKLPGENKSL 590
Score = 44.4 bits (100), Expect = 1e-04
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQ-RLIFAGKQLEDGRTLSDY 329
M+I + L GK L V +++ ++KAK K + ++ + GK+LED ++L++
Sbjct: 500 MKIKLSNLGGKGSLLTVGREESVSSLKAKASRKLDFKETEAVKMFYMGKELEDEKSLAEQ 559
Query: 330 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITL 425
N+Q S +HL LR + + + + L G+ +L
Sbjct: 560 NVQPNSLVHL-LRTKVHLWPWAQKLPGENKSL 590
>At2g30100.1 68415.m03663 ubiquitin family protein low similarity to
SP|Q9UQ13 Leucine-rich repeat protein SHOC-2
(Ras-binding protein Sur-8) {Homo sapiens}; contains
Pfam profiles PF00240: Ubiquitin family, PF01535: PPR
repeat, PF00560: Leucine Rich Repeat
Length = 897
Score = 42.3 bits (95), Expect = 5e-04
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = +3
Query: 180 GKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 359
GK+I L V P T++++K+++Q + P Q+LIF GK L + TL ++ + L L
Sbjct: 544 GKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLIFKGKVLVETSTLKQSDVGSGAKLML 603
Query: 360 VLR--LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 470
+ L G +K + + I+ V SD ++ K +
Sbjct: 604 MASQGLHQGEGPILKEASIRPISRTV-VSDKVDQRKPSV 641
Score = 39.1 bits (87), Expect = 0.004
Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Frame = +3
Query: 408 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 587
GK+I L V T++++K+++Q + P Q+LIF GK L + TL ++ + L L
Sbjct: 544 GKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLIFKGKVLVETSTLKQSDVGSGAKLML 603
Query: 588 VLR--LRGGMQIFVKTLTGKTITLEVEASDTIENVKAKI 698
+ L G +K + + I+ V SD ++ K +
Sbjct: 604 MASQGLHQGEGPILKEASIRPISRTV-VSDKVDQRKPSV 641
Score = 35.5 bits (78), Expect = 0.052
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +3
Query: 636 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEXGRTL 776
GK+I L V T++++K+++Q + P Q+LIF GK L TL
Sbjct: 544 GKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLIFKGKVLVETSTL 590
>At5g16090.1 68418.m01880 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 142
Score = 41.9 bits (94), Expect = 6e-04
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPDQQRLIFAGKQLEDGRTLS 323
M+I VKTL G +EV+P+D++ VK I+ G P QQ LI ++L D T+
Sbjct: 1 MKIIVKTLKGIRFEIEVKPNDSVAEVKKNIETVMGASEYPAAQQILIHKREKLRDETTME 60
Query: 324 DYNIQKESTLHLVL 365
+ +S + +++
Sbjct: 61 ANKVFDKSVIAIII 74
>At4g03360.1 68417.m00458 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 284
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/69 (28%), Positives = 38/69 (55%)
Frame = +3
Query: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 560
+++ ++ +G + T++V DT+ +K KI+ +G P +Q LIF K L+D +
Sbjct: 2 IKVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 61
Query: 561 IQKESTLHL 587
I+ S + L
Sbjct: 62 IRHNSRILL 70
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/70 (28%), Positives = 39/70 (55%)
Frame = +3
Query: 150 IMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 329
++++ ++ +G + T++V DT+ +K KI+ +G P +Q LIF K L+D +
Sbjct: 1 MIKVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGC 60
Query: 330 NIQKESTLHL 359
I+ S + L
Sbjct: 61 QIRHNSRILL 70
Score = 37.5 bits (83), Expect = 0.013
Identities = 19/69 (27%), Positives = 37/69 (53%)
Frame = +3
Query: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEXGRTLSDYX 788
+++ ++ +G + T++V DT+ +K KI+ +G P +Q LIF K L+ +
Sbjct: 2 IKVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 61
Query: 789 IQKNPLSIL 815
I+ N +L
Sbjct: 62 IRHNSRILL 70
>At4g02950.1 68417.m00402 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/69 (28%), Positives = 37/69 (53%)
Frame = +3
Query: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 560
+ + ++ +G + T++V DT+ +K KI+ +G P +Q LIF K L+D +
Sbjct: 36 ISVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 95
Query: 561 IQKESTLHL 587
I+ S + L
Sbjct: 96 IRHNSRILL 104
Score = 39.5 bits (88), Expect = 0.003
Identities = 20/70 (28%), Positives = 38/70 (54%)
Frame = +3
Query: 150 IMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 329
++ + ++ +G + T++V DT+ +K KI+ +G P +Q LIF K L+D +
Sbjct: 35 MISVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGC 94
Query: 330 NIQKESTLHL 359
I+ S + L
Sbjct: 95 QIRHNSRILL 104
Score = 37.1 bits (82), Expect = 0.017
Identities = 19/69 (27%), Positives = 36/69 (52%)
Frame = +3
Query: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEXGRTLSDYX 788
+ + ++ +G + T++V DT+ +K KI+ +G P +Q LIF K L+ +
Sbjct: 36 ISVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 95
Query: 789 IQKNPLSIL 815
I+ N +L
Sbjct: 96 IRHNSRILL 104
>At4g05250.1 68417.m00793 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 38.7 bits (86), Expect = 0.006
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = +3
Query: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 536
M +F +T +G +E+ DT+ +K KI+ + IP +Q LIF G L+D
Sbjct: 1 MDVFFETQSGDKFEIELGYWDTMLEIKEKIEKYQCIPVSKQTLIFQGVVLQD 52
Score = 38.3 bits (85), Expect = 0.007
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 308
M +F +T +G +E+ DT+ +K KI+ + IP +Q LIF G L+D
Sbjct: 1 MDVFFETQSGDKFEIELGYWDTMLEIKEKIEKYQCIPVSKQTLIFQGVVLQD 52
Score = 36.3 bits (80), Expect = 0.030
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +3
Query: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 761
M +F +T +G +E+ DT+ +K KI+ + IP +Q LIF G L+
Sbjct: 1 MDVFFETQSGDKFEIELGYWDTMLEIKEKIEKYQCIPVSKQTLIFQGVVLQ 51
>At4g05310.1 68417.m00809 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 415
Score = 37.1 bits (82), Expect = 0.017
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +3
Query: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 521
M+ V+ L G + +EVE +DT+ VK KI+ + +P +Q LI G
Sbjct: 1 MKFVVEILGGSSFEIEVERTDTLLVVKQKIEKSQRVPVSKQTLIVDG 47
Score = 37.1 bits (82), Expect = 0.017
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +3
Query: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 749
M+ V+ L G + +EVE +DT+ VK KI+ + +P +Q LI G
Sbjct: 1 MKFVVEILGGSSFEIEVERTDTLLVVKQKIEKSQRVPVSKQTLIVDG 47
Score = 36.7 bits (81), Expect = 0.023
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAG 293
M+ V+ L G + +EVE +DT+ VK KI+ + +P +Q LI G
Sbjct: 1 MKFVVEILGGSSFEIEVERTDTLLVVKQKIEKSQRVPVSKQTLIVDG 47
>At4g05270.1 68417.m00797 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 129
Score = 37.1 bits (82), Expect = 0.017
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +3
Query: 381 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 521
M+ V+ L G + LEV+ DT+ VK KI+ + IP +Q LI G
Sbjct: 1 MKFLVENLNGSSFELEVDYRDTLLVVKQKIERSQHIPVSKQTLIVDG 47
Score = 37.1 bits (82), Expect = 0.017
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +3
Query: 609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 749
M+ V+ L G + LEV+ DT+ VK KI+ + IP +Q LI G
Sbjct: 1 MKFLVENLNGSSFELEVDYRDTLLVVKQKIERSQHIPVSKQTLIVDG 47
Score = 36.7 bits (81), Expect = 0.023
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +3
Query: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAG 293
M+ V+ L G + LEV+ DT+ VK KI+ + IP +Q LI G
Sbjct: 1 MKFLVENLNGSSFELEVDYRDTLLVVKQKIERSQHIPVSKQTLIVDG 47
>At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein / ubiquitin family protein
similar to SP|Q15459 Splicing factor 3 subunit 1
(Spliceosome associated protein 114) {Homo sapiens};
contains Pfam profiles PF00240: Ubiquitin family,
PF01805: Surp module
Length = 785
Score = 37.1 bits (82), Expect = 0.017
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +3
Query: 408 GKTITLEVEA-SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 584
G+ + + V++ S+ + ++K KI + IP ++Q+L L+D +L+ YN+ L
Sbjct: 715 GQFMEITVQSLSENVGSLKEKIAGEIQIPANKQKLSGKAGFLKDNMSLAHYNVGAGEILT 774
Query: 585 LVLRLRGG 608
L LR RGG
Sbjct: 775 LSLRERGG 782
Score = 36.3 bits (80), Expect = 0.030
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = +3
Query: 210 SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 380
S+ + ++K KI + IP ++Q+L L+D +L+ YN+ L L LR RGG
Sbjct: 726 SENVGSLKEKIAGEIQIPANKQKLSGKAGFLKDNMSLAHYNVGAGEILTLSLRERGG 782
>At5g14360.1 68418.m01678 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 163
Score = 36.3 bits (80), Expect = 0.030
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 423 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 536
L +EA+ T +K + G+ P QQRL+F GK+ ED
Sbjct: 83 LSIEATSTFGELKMVLSLLTGLEPKQQRLVFKGKERED 120
Score = 34.3 bits (75), Expect = 0.12
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 195 LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 308
L +E + T +K + G+ P QQRL+F GK+ ED
Sbjct: 83 LSIEATSTFGELKMVLSLLTGLEPKQQRLVFKGKERED 120
Score = 33.9 bits (74), Expect = 0.16
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 651 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 761
L +EA+ T +K + G+ P QQRL+F GK+ E
Sbjct: 83 LSIEATSTFGELKMVLSLLTGLEPKQQRLVFKGKERE 119
>At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase
family protein similar to phosphatidylinositol 4-kinase
type-II beta [Homo sapiens] GI:20159767; contains Pfam
profile PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 630
Score = 36.3 bits (80), Expect = 0.030
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +3
Query: 375 GGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 545
G ++FV+T TG + LE++ SD VK K+Q P ++ L F L++ T
Sbjct: 39 GRRRVFVQTETGCVLGLELDRSDNAHTVKRKLQVALNFPIEESSLTFGDLVLKNDLT 95
Score = 35.5 bits (78), Expect = 0.052
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +3
Query: 603 GGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEXGRT 773
G ++FV+T TG + LE++ SD VK K+Q P ++ L F L+ T
Sbjct: 39 GRRRVFVQTETGCVLGLELDRSDNAHTVKRKLQVALNFPIEESSLTFGDLVLKNDLT 95
Score = 34.7 bits (76), Expect = 0.091
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +3
Query: 156 QIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 317
++FV+T TG + LE++ SD VK K+Q P ++ L F L++ T
Sbjct: 42 RVFVQTETGCVLGLELDRSDNAHTVKRKLQVALNFPIEESSLTFGDLVLKNDLT 95
>At5g40630.1 68418.m04932 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 165
Score = 34.3 bits (75), Expect = 0.12
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +3
Query: 393 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 536
V T++ + + ++A+ T +K I GI +QRL+F GK+ ED
Sbjct: 83 VSTVSQLSYEISIDANSTFGELKMMIAIVSGIEAKEQRLLFRGKERED 130
Score = 33.1 bits (72), Expect = 0.28
Identities = 15/53 (28%), Positives = 29/53 (54%)
Frame = +3
Query: 150 IMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED 308
++ + V T++ + + ++ + T +K I GI +QRL+F GK+ ED
Sbjct: 78 LISLRVSTVSQLSYEISIDANSTFGELKMMIAIVSGIEAKEQRLLFRGKERED 130
Score = 31.9 bits (69), Expect = 0.64
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +3
Query: 621 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE 761
V T++ + + ++A+ T +K I GI +QRL+F GK+ E
Sbjct: 83 VSTVSQLSYEISIDANSTFGELKMMIAIVSGIEAKEQRLLFRGKERE 129
>At1g11970.1 68414.m01383 hypothetical protein
Length = 99
Score = 34.3 bits (75), Expect = 0.12
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +3
Query: 174 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPD 269
L+ K I +E++P D IE +K I+++ GIP D
Sbjct: 50 LSEKKIDIEIDPMDKIEQIKEGIEEEIGIPSD 81
>At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N
domain-containing protein low similarity to NUB1
(NEDD8-interacting protein) [Homo sapiens] GI:13383476;
contains Pfam profile PF00627: UBA/TS-N domain
Length = 562
Score = 33.5 bits (73), Expect = 0.21
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Frame = +3
Query: 423 LEVEASD-TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG----RTLSDYNIQKESTLHL 587
LEVE + T+ ++ ++ + G+ P+ +LIFAGK L+D TLS I KE++ L
Sbjct: 14 LEVELENWTLNMLRDEVAKRSGLDPESIKLIFAGKILKDDGDATLTLSQLGI-KENSKIL 72
Query: 588 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 692
R + GK+I E E + + VKA
Sbjct: 73 SCRQAAPEE-------GKSIMAEEERARRLSRVKA 100
Score = 32.7 bits (71), Expect = 0.37
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Frame = +3
Query: 195 LEVEPSD-TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG----RTLSDYNIQKESTLHL 359
LEVE + T+ ++ ++ + G+ P+ +LIFAGK L+D TLS I KE++ L
Sbjct: 14 LEVELENWTLNMLRDEVAKRSGLDPESIKLIFAGKILKDDGDATLTLSQLGI-KENSKIL 72
Query: 360 VLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKA 464
R + GK+I E E + + VKA
Sbjct: 73 SCRQAAPEE-------GKSIMAEEERARRLSRVKA 100
Score = 31.5 bits (68), Expect = 0.85
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 5/62 (8%)
Frame = +3
Query: 651 LEVEASD-TIENVKAKIQDKEGIPPDQQRLIFAGKQL----EXGRTLSDYXIQKNPLSIL 815
LEVE + T+ ++ ++ + G+ P+ +LIFAGK L + TLS I++N IL
Sbjct: 14 LEVELENWTLNMLRDEVAKRSGLDPESIKLIFAGKILKDDGDATLTLSQLGIKENS-KIL 72
Query: 816 YC 821
C
Sbjct: 73 SC 74
>At4g03430.1 68417.m00470 pre-mRNA splicing factor-related similar
to pre-mRNA splicing factor pre-mRNA splicing factor
prp1 (SP:Q12381) [Fission yeast]
Length = 1029
Score = 31.5 bits (68), Expect = 0.85
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 10/86 (11%)
Frame = +3
Query: 159 IFVKTLTGKTITLEVEP-SDTIENVKAKIQDKEGIPPDQQRL---------IFAGKQLED 308
+F+ GKT++++V P S TI + + +P R +F + D
Sbjct: 2 VFLSIPNGKTLSIDVNPNSTTISAFEQLAHQRSDVPQSFLRYSLRMRNPSRVFVDSKDSD 61
Query: 309 GRTLSDYNIQKESTLHLVLRLRGGMQ 386
LSD + + ST+ + + L GGMQ
Sbjct: 62 SILLSDLGVSRFSTVIIHVLLLGGMQ 87
Score = 28.3 bits (60), Expect = 7.9
Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 10/86 (11%)
Frame = +3
Query: 387 IFVKTLTGKTITLEVEA-SDTIENVKAKIQDKEGIPPDQQRL---------IFAGKQLED 536
+F+ GKT++++V S TI + + +P R +F + D
Sbjct: 2 VFLSIPNGKTLSIDVNPNSTTISAFEQLAHQRSDVPQSFLRYSLRMRNPSRVFVDSKDSD 61
Query: 537 GRTLSDYNIQKESTLHLVLRLRGGMQ 614
LSD + + ST+ + + L GGMQ
Sbjct: 62 SILLSDLGVSRFSTVIIHVLLLGGMQ 87
>At5g41790.1 68418.m05088 COP1-interactive protein 1 / CIP1 almost
identical to CIP1 (GI:836950) [Arabidopsis thaliana]
Length = 1305
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +3
Query: 306 DGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 482
D L + +KES L L+ Q+ +K L TLE+E +E+V+A+I D E
Sbjct: 718 DSSKLKEQLAEKESKLFLLTEKDSKSQVQIKELEATVATLELE----LESVRARIIDLE 772
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +3
Query: 534 DGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKE 710
D L + +KES L L+ Q+ +K L TLE+E +E+V+A+I D E
Sbjct: 718 DSSKLKEQLAEKESKLFLLTEKDSKSQVQIKELEATVATLELE----LESVRARIIDLE 772
>At1g22050.1 68414.m02758 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 119
Score = 30.3 bits (65), Expect = 2.0
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 13/67 (19%)
Frame = +3
Query: 210 SDTIENVKAKI-----QDKEGIPP--DQQRLIFAGKQLEDGRTLSDYNIQ------KEST 350
S T+ ++K K+ +DKE P + +LI AGK LE+ RTL++ + T
Sbjct: 28 SMTVSSLKEKLISQWPKDKENTPKTVNDMKLINAGKILENNRTLAESRLPVCELPGMIIT 87
Query: 351 LHLVLRL 371
+H+VLRL
Sbjct: 88 MHIVLRL 94
Score = 30.3 bits (65), Expect = 2.0
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 13/67 (19%)
Frame = +3
Query: 438 SDTIENVKAKI-----QDKEGIPP--DQQRLIFAGKQLEDGRTLSDYNIQ------KEST 578
S T+ ++K K+ +DKE P + +LI AGK LE+ RTL++ + T
Sbjct: 28 SMTVSSLKEKLISQWPKDKENTPKTVNDMKLINAGKILENNRTLAESRLPVCELPGMIIT 87
Query: 579 LHLVLRL 599
+H+VLRL
Sbjct: 88 MHIVLRL 94
>At1g03970.1 68414.m00383 G-box binding factor 4 (GBF4) identical to
G-box binding factor 4 (GBF4) SP:P42777 from
[Arabidopsis thaliana]
Length = 270
Score = 29.5 bits (63), Expect = 3.4
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 5/113 (4%)
Frame = +3
Query: 183 KTITL-EVEPSD--TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 353
KTI + E EP D T+E+ AK + EG + I + DG D+ +Q+ S+
Sbjct: 100 KTIMMKEEEPEDIMTLEDFLAKAEMDEGASDEIDVKIPTERLNNDGSYTFDFPMQRHSSF 159
Query: 354 HLVLRLRGGMQIFVKTLTGKTITLEVEASD--TIENVKAKIQDKEGIPPDQQR 506
+V GG GK + +EA D + K I+++E ++R
Sbjct: 160 QMVEGSMGG-----GVTRGKRGRVMMEAMDKAAAQRQKRMIKNRESAARSRER 207
>At1g47680.1 68414.m05297 hypothetical protein
Length = 104
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 204 EPSDTIENVKAKIQDKEG-IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 359
E D +E++ K ++ G + +L +G+Q+ R L DY +Q E+T L
Sbjct: 31 EEDDGMEDITKKYHNEVGEVVQGVPQLRRSGRQISQSRYLEDYVMQSETTYGL 83
Score = 28.7 bits (61), Expect = 6.0
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 432 EASDTIENVKAKIQDKEG-IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 587
E D +E++ K ++ G + +L +G+Q+ R L DY +Q E+T L
Sbjct: 31 EEDDGMEDITKKYHNEVGEVVQGVPQLRRSGRQISQSRYLEDYVMQSETTYGL 83
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,153,302
Number of Sequences: 28952
Number of extensions: 429606
Number of successful extensions: 1529
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 719
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1433
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2285480280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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