Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11f10
         (692 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0232 + 6614784-6614882,6616145-6616477,6616708-6616967,661...    29   4.6  
11_03_0169 + 11102198-11102272,11103716-11103767,11104071-111041...    28   6.1  
11_03_0011 + 8934346-8934398,8936014-8936198,8936334-8936425,893...    28   6.1  
02_02_0411 - 9928175-9928187,9928385-9928575,9929044-9929126,992...    28   6.1  

>03_02_0232 +
           6614784-6614882,6616145-6616477,6616708-6616967,
           6617328-6617469,6617567-6617938,6618056-6618187,
           6618907-6619035,6619125-6621188
          Length = 1176

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +1

Query: 244 RHRARSCSNFNTNNFRTRYMNNKIN 318
           RH ARSC++  T N RTR  +N I+
Sbjct: 670 RHSARSCNSVFTTNNRTRDRHNYIS 694


>11_03_0169 +
           11102198-11102272,11103716-11103767,11104071-11104185,
           11104258-11104328,11105077-11105164,11105251-11105369,
           11106276-11106278,11106327-11106397
          Length = 197

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -1

Query: 200 YMYLEKAESQCYYLKMSTYYIHSFINH 120
           Y Y++  E   Y LK + Y +H+F N+
Sbjct: 52  YEYIDGVEDILYSLKQNNYEVHAFTNY 78


>11_03_0011 +
           8934346-8934398,8936014-8936198,8936334-8936425,
           8937699-8937768,8937856-8937971,8939050-8939146,
           8939965-8940044,8940198-8940392,8940548-8940631,
           8940709-8940769,8941530-8941590,8942023-8942116,
           8942188-8942260,8942573-8942655,8943241-8943431,
           8943563-8943572
          Length = 514

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = +1

Query: 205 TTLFLACVDVNIKRHRARSCSNFNTNNFRTRYMNNKINALTVVWVTGAL 351
           T L L+C++ N+K  +A    N+N   +++     K+N   V+ + G L
Sbjct: 138 TELLLSCME-NLKHGKAVDIPNYNFKTYKSVASARKVNPSDVIILEGIL 185


>02_02_0411 -
           9928175-9928187,9928385-9928575,9929044-9929126,
           9929444-9929516,9929588-9929681,9930100-9930160,
           9930824-9930884,9930963-9931046,9931196-9931390,
           9931526-9931605,9932595-9932691,9934198-9934313,
           9934407-9934476,9935439-9935530,9935661-9935823
          Length = 490

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = +1

Query: 205 TTLFLACVDVNIKRHRARSCSNFNTNNFRTRYMNNKINALTVVWVTGAL 351
           T L L+C++ N+K  +A    N+N   +++     K+N   V+ + G L
Sbjct: 113 TELLLSCME-NLKHGKAVDIPNYNFKTYKSVASARKVNPSDVIILEGIL 160


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,156,227
Number of Sequences: 37544
Number of extensions: 222745
Number of successful extensions: 361
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 361
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)