Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11f10
         (692 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY005815-1|AAF91072.1| 1678|Drosophila melanogaster arrow protein.     29   7.9  
AF223365-1|AAF28358.1| 1678|Drosophila melanogaster LDL-related ...    29   7.9  
AE013599-1719|AAF58373.2| 1678|Drosophila melanogaster CG5912-PA...    29   7.9  

>AY005815-1|AAF91072.1| 1678|Drosophila melanogaster arrow protein.
          Length = 1678

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 17/53 (32%), Positives = 24/53 (45%)
 Frame = -1

Query: 494  TNPKVLRLNPFLRPKILKHTLTKSKVAKVRQSRRLSNRNRHNYFNALRRAPVT 336
            T PK  +    L P  L  +   SK+A V  + R+S  N  N  N+  R  +T
Sbjct: 1482 TEPKDDQATDPLSPSTLSKSQRVSKIASVADAVRMSTLNSRNSMNSYDRNHIT 1534


>AF223365-1|AAF28358.1| 1678|Drosophila melanogaster LDL-related
            protein LRP6 protein.
          Length = 1678

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 17/53 (32%), Positives = 24/53 (45%)
 Frame = -1

Query: 494  TNPKVLRLNPFLRPKILKHTLTKSKVAKVRQSRRLSNRNRHNYFNALRRAPVT 336
            T PK  +    L P  L  +   SK+A V  + R+S  N  N  N+  R  +T
Sbjct: 1482 TEPKDDQATDPLSPSTLSKSQRVSKIASVADAVRMSTLNSRNSMNSYDRNHIT 1534


>AE013599-1719|AAF58373.2| 1678|Drosophila melanogaster CG5912-PA
            protein.
          Length = 1678

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 17/53 (32%), Positives = 24/53 (45%)
 Frame = -1

Query: 494  TNPKVLRLNPFLRPKILKHTLTKSKVAKVRQSRRLSNRNRHNYFNALRRAPVT 336
            T PK  +    L P  L  +   SK+A V  + R+S  N  N  N+  R  +T
Sbjct: 1482 TEPKDDQATDPLSPSTLSKSQRVSKIASVADAVRMSTLNSRNSMNSYDRNHIT 1534


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,605,440
Number of Sequences: 53049
Number of extensions: 407775
Number of successful extensions: 1236
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1233
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)