Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11f10
         (692 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71264-1|CAA95828.1|  998|Caenorhabditis elegans Hypothetical pr...    28   5.5  
U58755-3|AAB00693.2|  332|Caenorhabditis elegans Seven tm recept...    28   5.5  
AC006696-10|AAF39990.1|  228|Caenorhabditis elegans Hypothetical...    28   7.3  
Z82262-6|CAB05149.1|  374|Caenorhabditis elegans Hypothetical pr...    27   9.6  
Z74472-5|CAA98943.1|  802|Caenorhabditis elegans Hypothetical pr...    27   9.6  

>Z71264-1|CAA95828.1|  998|Caenorhabditis elegans Hypothetical
           protein K07G5.1 protein.
          Length = 998

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = +3

Query: 33  RIVIMDSFCFFVFFFYNITM*KIVKSIFVMIYKAVNVISRHFQVITL 173
           RI I+  F  F       +  KI KS  V+  KA++VIS    VI L
Sbjct: 48  RIFIISKFRIFFLMGKTTSSLKIEKSFHVLAIKAIHVISEEELVIHL 94


>U58755-3|AAB00693.2|  332|Caenorhabditis elegans Seven tm receptor
           protein 48 protein.
          Length = 332

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 6/55 (10%)
 Frame = +3

Query: 12  YTKCGFLRIVIMDSFCFFVFFFY------NITM*KIVKSIFVMIYKAVNVISRHF 158
           +TKCGF  + I++SF  F+  F+            IV +I  +++ A  +I+R F
Sbjct: 11  FTKCGFPTVSIINSFLIFLTVFHIRRIFGTYKQMLIVIAIMGILFSACELIARPF 65


>AC006696-10|AAF39990.1|  228|Caenorhabditis elegans Hypothetical
           protein W08E12.1 protein.
          Length = 228

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -1

Query: 224 HARNNVVNYMYLEKAESQCYYLKMSTYYIHSFINHNE 114
           +A NN  NY Y E AE   +      +Y HS ++H E
Sbjct: 5   NAENNHCNYSYHEHAELNPHDHYHHHHYPHSSVHHTE 41


>Z82262-6|CAB05149.1|  374|Caenorhabditis elegans Hypothetical
           protein C43F9.6 protein.
          Length = 374

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +1

Query: 469 FNLNTFGFVFSRVY*IF*WGLVTYMAV 549
           F+   +G++FS ++    WGL T +A+
Sbjct: 96  FDAGPYGYIFSFIFLFVLWGLATMLAI 122


>Z74472-5|CAA98943.1|  802|Caenorhabditis elegans Hypothetical
           protein F23H12.5 protein.
          Length = 802

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -1

Query: 458 RPKILKHTLTKSKVAKVRQSRRLSNRNRHNYFNALRRAPVTHT 330
           +PKI+   +T   + K R++RRL   NR      +   P  +T
Sbjct: 472 KPKIVTVEITNKPLKKKRRNRRLKKLNRLGKIRTMAVLPTEYT 514


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,879,206
Number of Sequences: 27780
Number of extensions: 217261
Number of successful extensions: 503
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 503
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)