BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmte11f10 (692 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 26 0.39 AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 23 2.1 DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 23 2.8 DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 23 2.8 DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 23 2.8 DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 21 8.4 DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 21 8.4 DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 21 8.4 DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 21 8.4 AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 8.4 >AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice variant B protein. Length = 810 Score = 25.8 bits (54), Expect = 0.39 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = +1 Query: 235 NIKRHRARSCSNFNTNNFRTRYMNNKINAL 324 N+ R+ +N N+ T+ NNKI+AL Sbjct: 362 NVTPKFPRNIDEYNNNDLDTKKWNNKISAL 391 >AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex determiner protein. Length = 428 Score = 23.4 bits (48), Expect = 2.1 Identities = 7/15 (46%), Positives = 10/15 (66%) Frame = +1 Query: 265 SNFNTNNFRTRYMNN 309 +N+N NN+ Y NN Sbjct: 336 NNYNNNNYNNNYNNN 350 Score = 21.8 bits (44), Expect = 6.4 Identities = 7/17 (41%), Positives = 9/17 (52%) Frame = +1 Query: 268 NFNTNNFRTRYMNNKIN 318 N+N NN+ NN N Sbjct: 332 NYNNNNYNNNNYNNNYN 348 Score = 21.4 bits (43), Expect = 8.4 Identities = 7/15 (46%), Positives = 9/15 (60%) Frame = +1 Query: 274 NTNNFRTRYMNNKIN 318 N NN++ Y NN N Sbjct: 325 NNNNYKYNYNNNNYN 339 >DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex determiner protein. Length = 179 Score = 23.0 bits (47), Expect = 2.8 Identities = 7/14 (50%), Positives = 10/14 (71%) Frame = +1 Query: 268 NFNTNNFRTRYMNN 309 N+N NN++ Y NN Sbjct: 90 NYNNNNYKKLYCNN 103 >DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex determiner protein. Length = 179 Score = 23.0 bits (47), Expect = 2.8 Identities = 7/14 (50%), Positives = 10/14 (71%) Frame = +1 Query: 268 NFNTNNFRTRYMNN 309 N+N NN++ Y NN Sbjct: 90 NYNNNNYKKLYCNN 103 >DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex determiner protein. Length = 179 Score = 23.0 bits (47), Expect = 2.8 Identities = 7/14 (50%), Positives = 10/14 (71%) Frame = +1 Query: 268 NFNTNNFRTRYMNN 309 N+N NN++ Y NN Sbjct: 90 NYNNNNYKKLYCNN 103 >DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex determiner protein. Length = 186 Score = 21.4 bits (43), Expect = 8.4 Identities = 7/15 (46%), Positives = 9/15 (60%) Frame = +1 Query: 274 NTNNFRTRYMNNKIN 318 N NN++ Y NN N Sbjct: 92 NNNNYKYNYNNNNYN 106 >DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex determiner protein. Length = 184 Score = 21.4 bits (43), Expect = 8.4 Identities = 7/15 (46%), Positives = 9/15 (60%) Frame = +1 Query: 274 NTNNFRTRYMNNKIN 318 N NN++ Y NN N Sbjct: 92 NNNNYKYNYNNNNYN 106 >DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex determiner protein. Length = 184 Score = 21.4 bits (43), Expect = 8.4 Identities = 7/15 (46%), Positives = 9/15 (60%) Frame = +1 Query: 274 NTNNFRTRYMNNKIN 318 N NN++ Y NN N Sbjct: 92 NNNNYKYNYNNNNYN 106 >DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex determiner protein. Length = 184 Score = 21.4 bits (43), Expect = 8.4 Identities = 7/15 (46%), Positives = 9/15 (60%) Frame = +1 Query: 274 NTNNFRTRYMNNKIN 318 N NN++ Y NN N Sbjct: 92 NNNNYKYNYNNNNYN 106 >AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex determiner protein. Length = 426 Score = 21.4 bits (43), Expect = 8.4 Identities = 7/18 (38%), Positives = 10/18 (55%) Frame = +1 Query: 265 SNFNTNNFRTRYMNNKIN 318 +N+N NN+ Y N N Sbjct: 327 NNYNNNNYNNNYNNYNNN 344 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 163,746 Number of Sequences: 438 Number of extensions: 3254 Number of successful extensions: 17 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 17 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 21195810 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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