Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11f05
         (696 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ697720-1|CAG26913.1|  207|Anopheles gambiae putative odorant-b...    27   0.75 
AY330172-1|AAQ16278.1|  170|Anopheles gambiae odorant-binding pr...    26   1.3  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   3.0  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    23   7.0  

>AJ697720-1|CAG26913.1|  207|Anopheles gambiae putative
           odorant-binding protein OBPjj10 protein.
          Length = 207

 Score = 26.6 bits (56), Expect = 0.75
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +3

Query: 201 HCPQSMVYCCDTRPKTPLRRSSCCDSKE 284
           +CP++   C +T P T  RR + C   E
Sbjct: 77  YCPRTRSACAETFPSTRRRRGALCMHSE 104


>AY330172-1|AAQ16278.1|  170|Anopheles gambiae odorant-binding
           protein AgamOBP52 protein.
          Length = 170

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
 Frame = +3

Query: 156 PTRC----EESPTCYPCLPHCPQS-MVYCCDTRPKTPLRRSSCCDSKE 284
           P RC     + P  +P  P   QS + YCC T P  P   S+ C  +E
Sbjct: 9   PFRCPLFFSKHPKQFP--PSKKQSELPYCCQTEPLIPEHVSTKCKERE 54


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 9/28 (32%), Positives = 19/28 (67%)
 Frame = +2

Query: 368 NPQALFKLLSNLLSAYLPTSQDKICHTV 451
           NP+ + + + NL++   P S+DK+ +T+
Sbjct: 657 NPKQIEEAVMNLITNLQPDSEDKLLNTM 684


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -2

Query: 542 LHSISSVRGPRKPTVTSRNVSFNTAVFVSITRYDIF 435
           +H I+S +  R P    R      A  +SI + DIF
Sbjct: 11  IHGIASCKRHRDPNAIQRVAREGLAKGISIKKCDIF 46


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 695,213
Number of Sequences: 2352
Number of extensions: 14819
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)