Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11f05
         (696 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   2.1  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   4.8  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   8.5  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -1

Query: 174 IPHIWLDTKM*QEPGLQRTDRSLQD 100
           I H++ D ++  EP   RTD S  D
Sbjct: 225 INHMFEDARLLDEPSANRTDLSKDD 249


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = -1

Query: 618 CRHSNPVNSLQHRDTARLLCSRVFD 544
           C    P+ +++ +    LLC + FD
Sbjct: 48  CGSETPLTNIEEKTYQCLLCQKAFD 72


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 296 TAIKFLAITTT*PPQWCLRPS 234
           TA     +T   PP+W L P+
Sbjct: 666 TASHSTTLTVNVPPRWILEPT 686


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,588
Number of Sequences: 438
Number of extensions: 3894
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21317625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)