Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11f04
         (690 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock p...    88   2e-19
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    24   3.9  
AY062206-1|AAL58567.1|  193|Anopheles gambiae cytochrome P450 CY...    23   9.1  
AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    23   9.1  

>AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock
           protein protein.
          Length = 133

 Score = 88.2 bits (209), Expect = 2e-19
 Identities = 48/107 (44%), Positives = 66/107 (61%), Gaps = 2/107 (1%)
 Frame = +3

Query: 87  SNIKIGKDKFQLSVDVHKFNKDELRVKARPDCLVIEGKQERKTKT-GYVMRRFTRKFRLP 263
           S + I KDKFQ+++DV +F+ +E+ VK   +C+++EGK E K    GYV R F R++ LP
Sbjct: 6   SAVNISKDKFQINLDVQQFSPEEISVKYVDNCVLVEGKHEEKQDDHGYVSRHFVRRYMLP 65

Query: 264 PGCSPKKIESKLSPEGILTITAPRKNWETTTPCETLIPIGYS-DPQK 401
            G +   I S LS +GILTIT PRK  E     E  IPI ++  P K
Sbjct: 66  KGHNEADIVSSLSSDGILTITCPRKEIEQKNE-ERSIPITHTGQPMK 111


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
           TPR-containing phosphoprotein protein.
          Length = 1200

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 12/50 (24%), Positives = 27/50 (54%)
 Frame = +3

Query: 69  QTRNLRSNIKIGKDKFQLSVDVHKFNKDELRVKARPDCLVIEGKQERKTK 218
           + R+LR   ++ +++F+      +   +E+R KA  + L+   + + KTK
Sbjct: 836 EERSLRQKQELEREEFKRRQAEDRRRMEEMRRKAHEEMLLKRQEYKEKTK 885


>AY062206-1|AAL58567.1|  193|Anopheles gambiae cytochrome P450
           CYP4H24 protein.
          Length = 193

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = -1

Query: 135 EHRHSAGTYLFLF*YSTLDFVFEELLRL 52
           E+RH   TY  L  +  LD V +E LRL
Sbjct: 36  EYRHVPLTYNTLQNFPYLDMVVKESLRL 63


>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 353 SCFPIFSRRCYRENAFRRQLRF 288
           S FP +  +C+ E  F   LRF
Sbjct: 213 SGFPAWKTQCFNEELFIEALRF 234


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 579,021
Number of Sequences: 2352
Number of extensions: 10866
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)