Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11f04
(690 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g27670.1 68417.m03979 25.3 kDa small heat shock protein, chlo... 41 7e-04
At5g12030.1 68418.m01406 17.7 kDa class II heat shock protein 17... 38 0.005
At1g59860.1 68414.m06742 17.6 kDa class I heat shock protein (HS... 36 0.019
At5g12020.1 68418.m01405 17.6 kDa class II heat shock protein (... 36 0.033
At1g07400.1 68414.m00789 17.8 kDa class I heat shock protein (HS... 35 0.044
At2g29500.1 68415.m03583 17.6 kDa class I small heat shock prote... 35 0.058
At1g53540.1 68414.m06074 17.6 kDa class I small heat shock prote... 33 0.14
At3g46230.1 68416.m05004 17.4 kDa class I heat shock protein (HS... 33 0.18
At3g10680.1 68416.m01284 heat shock protein-related contains wea... 33 0.18
At5g51440.1 68418.m06377 23.5 kDa mitochondrial small heat shock... 32 0.31
At5g59720.1 68418.m07486 18.1 kDa class I heat shock protein (HS... 31 0.72
At4g10250.1 68417.m01682 22.0 kDa ER small heat shock protein (H... 30 1.7
At4g25200.1 68417.m03627 23.6 kDa mitochondrial small heat shock... 29 2.9
At1g25470.2 68414.m03163 AP2 domain-containing transcription fac... 28 5.1
At1g25470.1 68414.m03162 AP2 domain-containing transcription fac... 28 5.1
At1g20910.1 68414.m02618 ARID/BRIGHT DNA-binding domain-containi... 27 8.9
>At4g27670.1 68417.m03979 25.3 kDa small heat shock protein,
chloroplast precursor (HSP25.3-P) identical to small
heat shock protein, chloroplast precursor SP:P31170 from
[Arabidopsis thaliana]; identified in Scharf, K-D., et
al,Cell Stress & Chaperones (2001) 6: 225-237.
Length = 227
Score = 41.1 bits (92), Expect = 7e-04
Identities = 22/90 (24%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Frame = +3
Query: 90 NIKIGKDKFQLSVDVHKFNKDELRVKARPDCLVIEGKQERKTK----TGYVMRRFTRKFR 257
+IK + + ++ D+ +K+++++ + LVI+G+Q+++ +G + + + +
Sbjct: 130 DIKEEEHEIKMRFDMPGLSKEDVKISVEDNVLVIKGEQKKEDSDDSWSGRSVSSYGTRLQ 189
Query: 258 LPPGCSPKKIESKLSPEGILTITAPRKNWE 347
LP C KI+++L G+L IT P+ E
Sbjct: 190 LPDNCEKDKIKAELK-NGVLFITIPKTKVE 218
>At5g12030.1 68418.m01406 17.7 kDa class II heat shock protein 17.6A
(HSP17.7-CII) identical to heat shock protein 17.6A
GI:3256075 from [Arabidopsis thaliana]
Length = 156
Score = 38.3 bits (85), Expect = 0.005
Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 10/86 (11%)
Frame = +3
Query: 108 DKFQLSVDVHKFNKDELRVKARPD-CLVIEGKQERKTKTG----YV-----MRRFTRKFR 257
D + +VD+ DE++V+ + LV+ GK++R K +V M +F RKF+
Sbjct: 55 DAYVFAVDMPGIKGDEIQVQIENENVLVVSGKRQRDNKENEGVKFVRMERRMGKFMRKFQ 114
Query: 258 LPPGCSPKKIESKLSPEGILTITAPR 335
LP +KI + + +G+L +T P+
Sbjct: 115 LPDNADLEKISAACN-DGVLKVTIPK 139
>At1g59860.1 68414.m06742 17.6 kDa class I heat shock protein
(HSP17.6A-CI) similar to 17.5 kDa class I heat shock
protein SP:P04793 from [Glycine max]
Length = 155
Score = 36.3 bits (80), Expect = 0.019
Identities = 26/95 (27%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Frame = +3
Query: 78 NLRSNIKIGKDKFQLSVDVHKFNKDELRVKARPDCLV-IEGKQ----ERKTKTGYVMRR- 239
N R + K + D+ K+E++V+ D ++ I G++ E K T + + R
Sbjct: 45 NARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERS 104
Query: 240 ---FTRKFRLPPGCSPKKIESKLSPEGILTITAPR 335
F+RKFRLP ++++ + G+LT+T P+
Sbjct: 105 SGGFSRKFRLPENVKMDQVKASME-NGVLTVTVPK 138
>At5g12020.1 68418.m01405 17.6 kDa class II heat shock protein
(HSP17.6-CII) identical to 17.6 kDa class II heat shock
protein SP:P29830 from [Arabidopsis thaliana]
Length = 155
Score = 35.5 bits (78), Expect = 0.033
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 10/80 (12%)
Frame = +3
Query: 126 VDVHKFNKDELRVKARPD-CLVIEGKQERKTKTG----YV-----MRRFTRKFRLPPGCS 275
VD+ DE++V+ D LV+ G+++R+ K YV M +F RKF+LP
Sbjct: 60 VDMPGIKGDEIKVQVENDNVLVVSGERQRENKENEGVKYVRMERRMGKFMRKFQLPENAD 119
Query: 276 PKKIESKLSPEGILTITAPR 335
KI S + +G+L +T +
Sbjct: 120 LDKI-SAVCHDGVLKVTVQK 138
>At1g07400.1 68414.m00789 17.8 kDa class I heat shock protein
(HSP17.8-CI) similar to 17.5 kDa class I heat shock
protein SP:P04793 from [Glycine max]; contains Pfam
PF00011: Hsp20/alpha crystallin family
Length = 157
Score = 35.1 bits (77), Expect = 0.044
Identities = 25/95 (26%), Positives = 48/95 (50%), Gaps = 9/95 (9%)
Frame = +3
Query: 78 NLRSNIKIGKDKFQLSVDVHKFNKDELRVKARPDCLV-IEGKQ----ERKTKTGYVMRR- 239
N R + K + D+ K+E++V+ D ++ I G++ E K T + + R
Sbjct: 47 NARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERS 106
Query: 240 ---FTRKFRLPPGCSPKKIESKLSPEGILTITAPR 335
F+RKF+LP ++++ + G+LT+T P+
Sbjct: 107 SGQFSRKFKLPENVKMDQVKASME-NGVLTVTVPK 140
>At2g29500.1 68415.m03583 17.6 kDa class I small heat shock protein
(HSP17.6B-CI) contains Pfam PF00011: Hsp20/alpha
crystallin family; identified in Scharf, K-D., et al,
Cell Stress & Chaperones (2001) 6: 225-237.
Length = 153
Score = 34.7 bits (76), Expect = 0.058
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 9/78 (11%)
Frame = +3
Query: 129 DVHKFNKDELRVKARPDCLV-IEGKQ----ERKTKTGYVMRR----FTRKFRLPPGCSPK 281
D+ K+E++V+ D ++ I G++ E K T + + R FTR+FRLP
Sbjct: 62 DLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFRLPENVKMD 121
Query: 282 KIESKLSPEGILTITAPR 335
++++ + G+LT+T P+
Sbjct: 122 QVKAAME-NGVLTVTVPK 138
>At1g53540.1 68414.m06074 17.6 kDa class I small heat shock protein
(HSP17.6C-CI) (AA 1-156) identical to (17.6 kDa class I
heat shock protein (HSP 17.6) (AA 1-156)(SP:P13853)
(GI:4376161) (Arabidopsis thaliana) (Nucleic Acids Res.
17 (19), 7995 (1989))
Length = 157
Score = 33.5 bits (73), Expect = 0.14
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 9/78 (11%)
Frame = +3
Query: 129 DVHKFNKDELRVKARP-DCLVIEGK-----QERKTKTGYVMR---RFTRKFRLPPGCSPK 281
D+ K+E++V+ + L I G+ +E+ K V R +FTR+FRLP +
Sbjct: 66 DLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLPENAKME 125
Query: 282 KIESKLSPEGILTITAPR 335
+I++ + G+L++T P+
Sbjct: 126 EIKASME-NGVLSVTVPK 142
>At3g46230.1 68416.m05004 17.4 kDa class I heat shock protein
(HSP17.4-CI) identical to 17.4 kDa class I heat shock
protein SP:P19036 from [Arabidopsis thaliana]
Length = 156
Score = 33.1 bits (72), Expect = 0.18
Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 9/78 (11%)
Frame = +3
Query: 129 DVHKFNKDELRVKARP-DCLVIEGKQ----ERKTKTGYVMRR----FTRKFRLPPGCSPK 281
DV K+E++V+ + L I G++ E K+ T + + R F R+FRLP +
Sbjct: 65 DVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRLPENAKVE 124
Query: 282 KIESKLSPEGILTITAPR 335
++++ + G+L++T P+
Sbjct: 125 EVKASME-NGVLSVTVPK 141
>At3g10680.1 68416.m01284 heat shock protein-related contains weak
similarity to Pfam profile PF00011: Hsp20/alpha
crystallin family
Length = 490
Score = 33.1 bits (72), Expect = 0.18
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Frame = +3
Query: 39 LHPFISAIVPQTRNLRSNIKIGKDKFQLSVDVHKFNKDELRVKA--RPDCLVIEGKQERK 212
L P +S+ P+ + S G F L V++ F +D++ +K R + I+G++
Sbjct: 19 LAPTVSSFKPRAQWTNS----GSSIF-LYVNLPGFYRDQIEIKKDERTRTVQIQGQRPLS 73
Query: 213 TKTGYVMRRFTRKFRLPPGCSPKKIESKLSPEGILTITAP 332
+T RF+ +R+P C K+ + S G+LTI P
Sbjct: 74 AQT---KARFSEAYRVPDTCDMTKLSTSFS-HGLLTIEFP 109
>At5g51440.1 68418.m06377 23.5 kDa mitochondrial small heat shock
protein (HSP23.5-M) similar to heat shock 22 kDa
protein, mitochondrial precursor SP:Q96331 from
[Arabidopsis thaliana]; identified in Scharf, K-D., et
al,Cell Stress & Chaperones (2001) 6: 225-237.
Length = 210
Score = 32.3 bits (70), Expect = 0.31
Identities = 21/85 (24%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Frame = +3
Query: 90 NIKIGKDKFQLSVDVHKFNKDELRVKARPDCLVI--EGKQERKTKTGYVMRRFTRKFRLP 263
N+K D L +D+ +++++++ + LVI EG+ E RRFT + LP
Sbjct: 112 NVKEKDDALHLRIDMPGLSREDVKLALEQNTLVIRGEGETEEGEDVSGDGRRFTSRIELP 171
Query: 264 PGC-SPKKIESKLSPEGILTITAPR 335
+I++++ G+L + P+
Sbjct: 172 EKVYKTDEIKAEMK-NGVLKVVIPK 195
>At5g59720.1 68418.m07486 18.1 kDa class I heat shock protein
(HSP18.1-CI) identical to 18.2 kDa class I heat shock
protein (HSP 18.2) (SP:P19037)[Arabidopsis thaliana];
contains Pfam profile: PF00011 Hsp20/alpha crystallin
family
Length = 161
Score = 31.1 bits (67), Expect = 0.72
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Frame = +3
Query: 78 NLRSNIKIGKDKFQLSVDVHKFNKDELRVKARP-DCLVIEGK-----QERKTKTGYVMR- 236
N R + K + D+ K+E++V+ + L I G+ +E+ K V R
Sbjct: 51 NARVDWKETPEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERA 110
Query: 237 --RFTRKFRLPPGCSPKKIESKLSPEGILTITAPR 335
+F R+FRLP +++++ + G+LT+ P+
Sbjct: 111 SGKFMRRFRLPENAKMEEVKATME-NGVLTVVVPK 144
>At4g10250.1 68417.m01682 22.0 kDa ER small heat shock protein
(HSP22.0-ER) identical to endomembrane-localized small
heat shock protein GI:511795 from [Arabidopsis thaliana]
Length = 195
Score = 29.9 bits (64), Expect = 1.7
Identities = 21/78 (26%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Frame = +3
Query: 117 QLSVDVHKFNKDELRVKARPD-CLVIEGKQERKT-KTGYVMRR-------FTRKFRLPPG 269
++ +D+ KDE++++ + L + G+++R+ K G R F R+F+LP
Sbjct: 83 EIMLDIPGLKKDEVKIEVEENGVLRVSGERKREEEKKGDQWHRVERSYGKFWRQFKLPDN 142
Query: 270 CSPKKIESKLSPEGILTI 323
+ +++KL G+LTI
Sbjct: 143 VDMESVKAKLE-NGVLTI 159
>At4g25200.1 68417.m03627 23.6 kDa mitochondrial small heat shock
protein (HSP23.6-M) contains Pfam profile PF00011:
Hsp20/alpha crystallin family
Length = 210
Score = 29.1 bits (62), Expect = 2.9
Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Frame = +3
Query: 90 NIKIGKDKFQLSVDVHKFNKDELRVKARPDCLVIEGKQERKTKTGYV----MRRFTRKFR 257
+IK D L +D+ +++++++ D LVI G+ + + G RRFT +
Sbjct: 110 DIKEKDDALYLRIDMPGLSREDVKLALEQDTLVIRGEGKNEEDGGEEGESGNRRFTSRIG 169
Query: 258 LPPGC-SPKKIESKLSPEGILTITAPR 335
LP +I++++ G+L + P+
Sbjct: 170 LPDKIYKIDEIKAEMK-NGVLKVVIPK 195
>At1g25470.2 68414.m03163 AP2 domain-containing transcription
factor, putative similar to putative AP2 domain
transcription factor GI:6553944 from [Arabidopsis
thaliana]
Length = 287
Score = 28.3 bits (60), Expect = 5.1
Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +3
Query: 186 VIEGKQERKTKTGYVMRRFTRKFRLPPGCSPKKIESKLSPEGILTITAPRKNWETT--TP 359
V E Q+R R+ TR+F+ P G P+ K + E IL K W T TP
Sbjct: 56 VSESSQDRSNAVKTPRRKSTRQFKYPVGVRPRP-SGKFAAE-ILNPFTKTKKWLGTYETP 113
Query: 360 CE 365
E
Sbjct: 114 AE 115
>At1g25470.1 68414.m03162 AP2 domain-containing transcription
factor, putative similar to putative AP2 domain
transcription factor GI:6553944 from [Arabidopsis
thaliana]
Length = 287
Score = 28.3 bits (60), Expect = 5.1
Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +3
Query: 186 VIEGKQERKTKTGYVMRRFTRKFRLPPGCSPKKIESKLSPEGILTITAPRKNWETT--TP 359
V E Q+R R+ TR+F+ P G P+ K + E IL K W T TP
Sbjct: 56 VSESSQDRSNAVKTPRRKSTRQFKYPVGVRPRP-SGKFAAE-ILNPFTKTKKWLGTYETP 113
Query: 360 CE 365
E
Sbjct: 114 AE 115
>At1g20910.1 68414.m02618 ARID/BRIGHT DNA-binding domain-containing
protein low similarity to Chain A, Human Mrf-2 Domain
[Homo sapiens] GI:14278238; contains Pfam profile
PF01388: ARID/BRIGHT DNA binding domain
Length = 398
Score = 27.5 bits (58), Expect = 8.9
Identities = 19/84 (22%), Positives = 36/84 (42%)
Frame = +3
Query: 81 LRSNIKIGKDKFQLSVDVHKFNKDELRVKARPDCLVIEGKQERKTKTGYVMRRFTRKFRL 260
++ N+K KD F++ V + E+R+++ P V+ Q + + + F + L
Sbjct: 312 VKINVKESKDSFEIFALVPGLLRKEVRIQSDPAGKVVITGQPEQLDNPWGITPFKKIVDL 371
Query: 261 PPGCSPKKIESKLSPEGILTITAP 332
P + +S G L I P
Sbjct: 372 SARIDPLHTSAVMSMHGRLFIRVP 395
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,785,319
Number of Sequences: 28952
Number of extensions: 217596
Number of successful extensions: 512
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 512
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1467502800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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