Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11f02
         (705 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    25   0.45 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   2.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   2.4  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    23   2.4  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   4.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.4  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    21   7.4  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   9.8  

>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 25.4 bits (53), Expect = 0.45
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = +2

Query: 422 PREGDNEEESDASRDKSHAPQTEQLISAHHIRKR*CIYIKQE 547
           P   + + + D S D      T+Q  S H  RKR  ++ K +
Sbjct: 10  PAVSERDPDEDNSEDSKDPHLTDQQASGHKKRKRRVLFSKAQ 51


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +3

Query: 234  LVADYKRLETINKEYTTKLEEVGELQ 311
            +VAD ++L+ IN EY  + E   E++
Sbjct: 1344 IVADLQKLKGINNEYEDQTEVPVEMR 1369


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +3

Query: 234  LVADYKRLETINKEYTTKLEEVGELQ 311
            +VAD ++L+ IN EY  + E   E++
Sbjct: 1344 IVADLQKLKGINNEYEDQTEVPVEMR 1369


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 233 ILPFLHTFFNFHLWVVQVFSQ 171
           I  F+ TFFN  L ++ VFS+
Sbjct: 65  IANFMLTFFNVSLRIILVFSK 85


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -2

Query: 296 FF*FCCVLF 270
           FF FCC+LF
Sbjct: 12  FFSFCCILF 20


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = -1

Query: 129 DYQLHFTYYYCYLKVRALGMPLAA*FEAI 43
           DY+ H     CYL  R + + L   F  I
Sbjct: 125 DYKRHKKRLLCYLLARYVALALVILFSEI 153


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = -1

Query: 129 DYQLHFTYYYCYLKVRALGMPLAA*FEAI 43
           DY+ H     CYL  R + + L   F  I
Sbjct: 143 DYKRHKKRLLCYLLARYVALALVILFSEI 171


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = -2

Query: 440 HYLLLEVCDA 411
           +YLL+EVC+A
Sbjct: 287 YYLLIEVCNA 296


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,168
Number of Sequences: 336
Number of extensions: 2756
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)