Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11f01
         (727 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_59710| Best HMM Match : Peptidase_S24 (HMM E-Value=0.7)             84   1e-16
SB_1737| Best HMM Match : UPF0147 (HMM E-Value=6)                      62   6e-10

>SB_59710| Best HMM Match : Peptidase_S24 (HMM E-Value=0.7)
          Length = 230

 Score = 83.8 bits (198), Expect = 1e-16
 Identities = 40/107 (37%), Positives = 62/107 (57%), Gaps = 2/107 (1%)
 Frame = +1

Query: 361 PSMEPTLESNNIL-LTEHISPRLQKLRRGDIIIAKSPSNPRQNICKRIKGLPGDKVRG-N 534
           PS     ++ +I+ L +      + ++RGD++    P +P   + KRI  L GD V+   
Sbjct: 54  PSFNTDYKTRDIVVLNKWCVKNFKGIKRGDVVSIVDPHDPDIMLIKRIVALQGDHVKAIG 113

Query: 535 FPKRSQVVPRGHVWLEGDNSSNSADSRIYGPVPAGLIRSRVVCRVWP 675
           +  R   +PRGH W+EGDNS++S DS  +GPVP GLI+++    VWP
Sbjct: 114 YKNRYVKIPRGHCWIEGDNSNHSMDSNTFGPVPVGLIQAKATHVVWP 160


>SB_1737| Best HMM Match : UPF0147 (HMM E-Value=6)
          Length = 253

 Score = 61.7 bits (143), Expect = 6e-10
 Identities = 23/40 (57%), Positives = 31/40 (77%)
 Frame = +1

Query: 556 VPRGHVWLEGDNSSNSADSRIYGPVPAGLIRSRVVCRVWP 675
           +PRGH W+EGDNS++S DS  +GPVP GLI+++    VWP
Sbjct: 144 IPRGHCWIEGDNSNHSMDSNTFGPVPVGLIQAKATHVVWP 183


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,915,461
Number of Sequences: 59808
Number of extensions: 437227
Number of successful extensions: 831
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 830
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1937927537
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)