Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11f01
(727 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC023595-1|AAH23595.1| 166|Homo sapiens IMMP1L protein protein. 187 4e-47
AK057788-1|BAB71573.1| 166|Homo sapiens protein ( Homo sapiens ... 187 4e-47
AL133295-1|CAC39221.1| 144|Homo sapiens dJ1137O17.1 (similar to... 176 6e-44
AF359563-1|AAK52905.1| 175|Homo sapiens inner mitochondrial mem... 90 6e-18
BC008497-1|AAH08497.1| 110|Homo sapiens IMMP2L protein protein. 48 3e-05
AC005161-1|AAS07432.1| 34|Homo sapiens unknown protein. 40 0.009
BC047879-1|AAH47879.1| 577|Homo sapiens SHQ1 homolog (S. cerevi... 31 4.2
BC039830-1|AAH39830.1| 577|Homo sapiens SHQ1 homolog (S. cerevi... 31 4.2
BC032671-1|AAH32671.1| 577|Homo sapiens SHQ1 homolog (S. cerevi... 31 4.2
BC025270-1|AAH25270.1| 577|Homo sapiens SHQ1 homolog (S. cerevi... 31 4.2
BC017274-1|AAH17274.1| 577|Homo sapiens SHQ1 homolog (S. cerevi... 31 4.2
BC017204-1|AAH17204.1| 577|Homo sapiens SHQ1 homolog (S. cerevi... 31 4.2
AK024656-1|BAB14947.1| 352|Homo sapiens protein ( Homo sapiens ... 31 4.2
AK001401-1|BAA91669.1| 519|Homo sapiens protein ( Homo sapiens ... 31 4.2
AM774227-1|CAO81740.1| 939|Homo sapiens collagen type VI alpha ... 30 9.7
>BC023595-1|AAH23595.1| 166|Homo sapiens IMMP1L protein protein.
Length = 166
Score = 187 bits (455), Expect = 4e-47
Identities = 82/150 (54%), Positives = 105/150 (70%), Gaps = 4/150 (2%)
Frame = +1
Query: 265 GKTCGFIGYALQYACITHCTFEYIGDFVMCSGPSMEPTLESNNILLTEHISPRLQKLRRG 444
GKT +GY +QY CI HC FEY+G VMCSGPSMEPT+++++I+ E++S ++RG
Sbjct: 7 GKTFRLVGYTIQYGCIAHCAFEYVGGVVMCSGPSMEPTIQNSDIVFAENLSRHFYGIQRG 66
Query: 445 DIIIAKSPSNPRQNICKRIKGLPGDKV----RGNFPKRSQVVPRGHVWLEGDNSSNSADS 612
DI+IAKSPS+P+ NICKR+ GL GDK+ +F K VP GHVWLEGDN NS DS
Sbjct: 67 DIVIAKSPSDPKSNICKRVIGLEGDKILTTSPSDFFKSHSYVPMGHVWLEGDNLQNSTDS 126
Query: 613 RIYGPVPAGLIRSRVVCRVWPLDKITSLAA 702
R YGP+P GLIR R+ ++WPL L A
Sbjct: 127 RCYGPIPYGLIRGRIFFKIWPLSDFGFLRA 156
>AK057788-1|BAB71573.1| 166|Homo sapiens protein ( Homo sapiens
cDNA FLJ25059 fis, clone CBL04610. ).
Length = 166
Score = 187 bits (455), Expect = 4e-47
Identities = 82/150 (54%), Positives = 105/150 (70%), Gaps = 4/150 (2%)
Frame = +1
Query: 265 GKTCGFIGYALQYACITHCTFEYIGDFVMCSGPSMEPTLESNNILLTEHISPRLQKLRRG 444
GKT +GY +QY CI HC FEY+G VMCSGPSMEPT+++++I+ E++S ++RG
Sbjct: 7 GKTFRLVGYTIQYGCIAHCAFEYVGGVVMCSGPSMEPTIQNSDIVFAENLSRHFYGIQRG 66
Query: 445 DIIIAKSPSNPRQNICKRIKGLPGDKV----RGNFPKRSQVVPRGHVWLEGDNSSNSADS 612
DI+IAKSPS+P+ NICKR+ GL GDK+ +F K VP GHVWLEGDN NS DS
Sbjct: 67 DIVIAKSPSDPKSNICKRVIGLEGDKILTTSPSDFFKSHSYVPMGHVWLEGDNLQNSTDS 126
Query: 613 RIYGPVPAGLIRSRVVCRVWPLDKITSLAA 702
R YGP+P GLIR R+ ++WPL L A
Sbjct: 127 RCYGPIPYGLIRGRIFFKIWPLSDFGFLRA 156
>AL133295-1|CAC39221.1| 144|Homo sapiens dJ1137O17.1 (similar to
putative mitochondrial inner membrane protease subnunit
protein.
Length = 144
Score = 176 bits (429), Expect = 6e-44
Identities = 77/135 (57%), Positives = 98/135 (72%), Gaps = 4/135 (2%)
Frame = +1
Query: 265 GKTCGFIGYALQYACITHCTFEYIGDFVMCSGPSMEPTLESNNILLTEHISPRLQKLRRG 444
GKT +GY +QY CI HC FEY+G VMCSGPSMEPT+++++I+ E++S ++RG
Sbjct: 7 GKTFRLVGYTIQYGCIAHCAFEYVGGVVMCSGPSMEPTIQNSDIVFAENLSRHFYGIQRG 66
Query: 445 DIIIAKSPSNPRQNICKRIKGLPGDKV----RGNFPKRSQVVPRGHVWLEGDNSSNSADS 612
DI+IAKSPS+P+ NICKR+ GL GDK+ +F K VP GHVWLEGDN NS DS
Sbjct: 67 DIVIAKSPSDPKSNICKRVIGLEGDKILTTSPSDFFKSHSYVPMGHVWLEGDNLQNSTDS 126
Query: 613 RIYGPVPAGLIRSRV 657
R YGP+P GLIR R+
Sbjct: 127 RCYGPIPYGLIRGRI 141
>AF359563-1|AAK52905.1| 175|Homo sapiens inner mitochondrial
membrane peptidase 2 protein.
Length = 175
Score = 90.2 bits (214), Expect = 6e-18
Identities = 47/115 (40%), Positives = 68/115 (59%), Gaps = 6/115 (5%)
Frame = +1
Query: 358 GPSMEPTL-----ESNNILLTEHISPRLQKLRRGDIIIAKSPSNPRQNICKRIKGLPGDK 522
G SM+P+L +S++++L H R ++ RGDI+ SP NP Q I KR+ L GD
Sbjct: 41 GASMQPSLNPGGSQSSDVVLLNHWKVRNFEVHRGDIVSLVSPKNPEQKIIKRVIALEGDI 100
Query: 523 VRGNFPKRSQV-VPRGHVWLEGDNSSNSADSRIYGPVPAGLIRSRVVCRVWPLDK 684
VR K V VPRGH+W+EGD+ +S DS +GPV GL+ + +WP ++
Sbjct: 101 VRTIGHKNRYVKVPRGHIWVEGDHHGHSFDSNSFGPVSLGLLHAHATHILWPPER 155
>BC008497-1|AAH08497.1| 110|Homo sapiens IMMP2L protein protein.
Length = 110
Score = 48.4 bits (110), Expect = 3e-05
Identities = 26/62 (41%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Frame = +1
Query: 358 GPSMEPTL-----ESNNILLTEHISPRLQKLRRGDIIIAKSPSNPRQNICKRIKGLPGDK 522
G SM+P+L +S++++L H R ++ RGDI+ SP NP Q I KR+ L GD
Sbjct: 41 GASMQPSLNPGGSQSSDVVLLNHWKVRNFEVHRGDIVSLVSPKNPEQKIIKRVIALEGDI 100
Query: 523 VR 528
VR
Sbjct: 101 VR 102
>AC005161-1|AAS07432.1| 34|Homo sapiens unknown protein.
Length = 34
Score = 39.9 bits (89), Expect = 0.009
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +1
Query: 556 VPRGHVWLEGDNSSNSADSRIYGP 627
VPRGH+W+EGD+ +S DS +GP
Sbjct: 11 VPRGHIWVEGDHHGHSFDSNSFGP 34
>BC047879-1|AAH47879.1| 577|Homo sapiens SHQ1 homolog (S.
cerevisiae) protein.
Length = 577
Score = 31.1 bits (67), Expect = 4.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -2
Query: 378 CWFH*WSRTHDKITNIFERTMCY 310
CWF W+ HD + + R +CY
Sbjct: 309 CWFETWTNVHDIMVSFGRRVLCY 331
>BC039830-1|AAH39830.1| 577|Homo sapiens SHQ1 homolog (S.
cerevisiae) protein.
Length = 577
Score = 31.1 bits (67), Expect = 4.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -2
Query: 378 CWFH*WSRTHDKITNIFERTMCY 310
CWF W+ HD + + R +CY
Sbjct: 309 CWFETWTNVHDIMVSFGRRVLCY 331
>BC032671-1|AAH32671.1| 577|Homo sapiens SHQ1 homolog (S.
cerevisiae) protein.
Length = 577
Score = 31.1 bits (67), Expect = 4.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -2
Query: 378 CWFH*WSRTHDKITNIFERTMCY 310
CWF W+ HD + + R +CY
Sbjct: 309 CWFETWTNVHDIMVSFGRRVLCY 331
>BC025270-1|AAH25270.1| 577|Homo sapiens SHQ1 homolog (S.
cerevisiae) protein.
Length = 577
Score = 31.1 bits (67), Expect = 4.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -2
Query: 378 CWFH*WSRTHDKITNIFERTMCY 310
CWF W+ HD + + R +CY
Sbjct: 309 CWFETWTNVHDIMVSFGRRVLCY 331
>BC017274-1|AAH17274.1| 577|Homo sapiens SHQ1 homolog (S.
cerevisiae) protein.
Length = 577
Score = 31.1 bits (67), Expect = 4.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -2
Query: 378 CWFH*WSRTHDKITNIFERTMCY 310
CWF W+ HD + + R +CY
Sbjct: 309 CWFETWTNVHDIMVSFGRRVLCY 331
>BC017204-1|AAH17204.1| 577|Homo sapiens SHQ1 homolog (S.
cerevisiae) protein.
Length = 577
Score = 31.1 bits (67), Expect = 4.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -2
Query: 378 CWFH*WSRTHDKITNIFERTMCY 310
CWF W+ HD + + R +CY
Sbjct: 309 CWFETWTNVHDIMVSFGRRVLCY 331
>AK024656-1|BAB14947.1| 352|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21003 fis, clone CAE03685. ).
Length = 352
Score = 31.1 bits (67), Expect = 4.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -2
Query: 378 CWFH*WSRTHDKITNIFERTMCY 310
CWF W+ HD + + R +CY
Sbjct: 84 CWFETWTNVHDIMVSFGRRVLCY 106
>AK001401-1|BAA91669.1| 519|Homo sapiens protein ( Homo sapiens
cDNA FLJ10539 fis, clone NT2RP2001218. ).
Length = 519
Score = 31.1 bits (67), Expect = 4.2
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -2
Query: 378 CWFH*WSRTHDKITNIFERTMCY 310
CWF W+ HD + + R +CY
Sbjct: 251 CWFETWTNVHDIMVSFGRRVLCY 273
>AM774227-1|CAO81740.1| 939|Homo sapiens collagen type VI alpha 6
protein.
Length = 939
Score = 29.9 bits (64), Expect = 9.7
Identities = 22/59 (37%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +1
Query: 502 KGLPGDK-VRGNFPKRSQVVPRGHVWLEGDNSSNSADSRIYGPVPAGLIRSRVVCRVWP 675
KG GD+ +G+ KR RG L GD + DS I GP R R R WP
Sbjct: 157 KGEKGDEGSQGSPGKRGTPGDRGAKGLRGDPGAPGVDSSIEGPTGLKGERGRQGRRGWP 215
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,748,054
Number of Sequences: 237096
Number of extensions: 2324107
Number of successful extensions: 7139
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 7038
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7133
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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