Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11f01
(727 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g53530.1 68414.m06072 signal peptidase I family protein conta... 113 9e-26
At1g23465.1 68414.m02941 signal peptidase-related 113 1e-25
At1g29960.1 68414.m03663 signal peptidase I family protein / MAD... 111 5e-25
At3g08980.1 68416.m01049 signal peptidase I family protein simil... 84 1e-16
At3g24590.1 68416.m03089 signal peptidase I family protein conta... 45 4e-05
At2g30440.1 68415.m03709 chloroplast thylakoidal processing pept... 45 4e-05
At1g06870.1 68414.m00731 signal peptidase, putative similar to c... 45 4e-05
At2g26330.1 68415.m03159 leucine-rich repeat protein kinase, put... 35 0.048
At3g23550.1 68416.m02963 MATE efflux family protein similar to r... 32 0.34
At5g56810.1 68418.m07089 F-box family protein contains F-box dom... 30 1.4
At5g59680.1 68418.m07482 leucine-rich repeat protein kinase, put... 30 1.8
At3g23560.1 68416.m02964 MATE efflux family protein similar to r... 29 2.4
At2g07300.1 68415.m00837 hypothetical protein 29 2.4
At1g74540.1 68414.m08636 cytochrome P450, putative similar to cy... 29 2.4
At3g16857.2 68416.m02153 two-component responsive regulator fami... 29 4.1
At3g16857.1 68416.m02152 two-component responsive regulator fami... 29 4.1
At3g13065.1 68416.m01632 leucine-rich repeat transmembrane prote... 29 4.1
At4g12410.1 68417.m01962 auxin-responsive family protein similar... 28 5.5
At2g20240.1 68415.m02365 expressed protein 28 5.5
At1g48760.2 68414.m05457 delta-adaptin, putative similar to SP|O... 28 5.5
At1g48760.1 68414.m05456 delta-adaptin, putative similar to SP|O... 28 5.5
At4g19450.1 68417.m02861 nodulin-related weak similarity to nodu... 28 7.2
>At1g53530.1 68414.m06072 signal peptidase I family protein contains
similarity to SP|P28627 Mitochondrial inner membrane
protease subunit 1 (EC 3.4.99.-) {Saccharomyces
cerevisiae}; contains Pfam profile PF00461: Signal
peptidase I
Length = 168
Score = 113 bits (273), Expect = 9e-26
Identities = 56/145 (38%), Positives = 85/145 (58%), Gaps = 7/145 (4%)
Frame = +1
Query: 283 IGYALQYACITHCTFEYIGDFVMCSGPSMEPTLE-SNNILLTEHISPRLQKLRRGDIIIA 459
+ ++ C+ H T YI GPSM PTL + +++L EH+S R K+ GD+++
Sbjct: 23 VSIVAKFLCLLHVTDRYIISTTHVHGPSMLPTLNLTGDVILAEHLSHRFGKIGLGDVVLV 82
Query: 460 KSPSNPRQNICKRIKGLPGDKVRGNFPKR------SQVVPRGHVWLEGDNSSNSADSRIY 621
+SP +P++ + KRI GL GD++ + S +VP+GHVW++GDN S DSR +
Sbjct: 83 RSPRDPKRMVTKRILGLEGDRLTFSADPLVGDASVSVLVPKGHVWIQGDNLYASTDSRHF 142
Query: 622 GPVPAGLIRSRVVCRVWPLDKITSL 696
GPVP LI + + RVWP + SL
Sbjct: 143 GPVPYSLIEGKALLRVWPPEYFGSL 167
>At1g23465.1 68414.m02941 signal peptidase-related
Length = 155
Score = 113 bits (271), Expect = 1e-25
Identities = 61/128 (47%), Positives = 79/128 (61%), Gaps = 7/128 (5%)
Frame = +1
Query: 307 CITHCTFEYIGDFVMCSGPSMEPTLE-SNNILLTEHISPRLQKLRRGDIIIAKSPSNPRQ 483
C H T Y+G GPSM PTL S N+LL E IS R QK RGDI++ +SP NP +
Sbjct: 28 CFLHVTTNYLGFMAYAYGPSMIPTLHPSGNMLLAERISKRYQKPSRGDIVVIRSPENPNK 87
Query: 484 NICKRIKGLPGDKVRGNF-PKRSQ-----VVPRGHVWLEGDNSSNSADSRIYGPVPAGLI 645
KR+ G+ GD + P +S VVP+GHV+++GD + NS DSR +GPVP GLI
Sbjct: 88 TPIKRVVGVEGDCISFVIDPVKSDESQTIVVPKGHVFVQGDYTHNSRDSRNFGPVPYGLI 147
Query: 646 RSRVVCRV 669
+ RV+ RV
Sbjct: 148 QGRVLWRV 155
>At1g29960.1 68414.m03663 signal peptidase I family protein /
MADS-box protein-related similar to inner mitochondrial
membrane peptidase 2 [Homo sapiens] GI:14030456;
contains Pfam profiles PF00461: Signal peptidase I,
contains Pfam profile PF00319: SRF-type transcription
factor (DNA-binding and dimerisation domain); MADS-box
protein AGL64
Length = 310
Score = 111 bits (267), Expect = 5e-25
Identities = 58/127 (45%), Positives = 78/127 (61%), Gaps = 7/127 (5%)
Frame = +1
Query: 307 CITHCTFEYIGDFVMCSGPSMEPTLE-SNNILLTEHISPRLQKLRRGDIIIAKSPSNPRQ 483
C H T Y+G GPSM PTL S N+LL E IS R QK RGDI++ +SP NP +
Sbjct: 28 CFLHVTTNYLGFMAYAYGPSMTPTLHPSGNVLLAERISKRYQKPSRGDIVVIRSPENPNK 87
Query: 484 NICKRIKGLPGDKV------RGNFPKRSQVVPRGHVWLEGDNSSNSADSRIYGPVPAGLI 645
KR+ G+ GD + R + ++ VVP+GHV+++GD + NS DSR +G VP GLI
Sbjct: 88 TPIKRVIGIEGDCISFVIDSRKSDESQTIVVPKGHVFVQGDYTHNSRDSRNFGTVPYGLI 147
Query: 646 RSRVVCR 666
+ RV+ R
Sbjct: 148 QGRVLWR 154
>At3g08980.1 68416.m01049 signal peptidase I family protein similar
to SP|P46972 Mitochondrial inner membrane protease
subunit 2 (EC 3.4.99.-) {Saccharomyces cerevisiae};
contains Pfam profile PF00461: Signal peptidase I
Length = 154
Score = 83.8 bits (198), Expect = 1e-16
Identities = 45/120 (37%), Positives = 69/120 (57%), Gaps = 7/120 (5%)
Frame = +1
Query: 358 GPSMEPTL--ESNNIL----LTEHISPRLQKLRRGDIIIAKSPSNPRQNICKRIKGLPGD 519
G SM PT + N+ L L + + K RGD+++ SP++ KRI G+PG+
Sbjct: 36 GDSMSPTFNPQRNSYLDDYVLVDKFCLKDYKFARGDVVVFSSPTHFGDRYIKRIVGMPGE 95
Query: 520 KVRGNFPKRSQV-VPRGHVWLEGDNSSNSADSRIYGPVPAGLIRSRVVCRVWPLDKITSL 696
+ + R + VP GH W+EGDN ++S DSR +GP+P GLI+ RV +WP +I+ +
Sbjct: 96 WISSS---RDVIRVPEGHCWVEGDNKTSSLDSRSFGPIPLGLIQGRVTRVMWPPQRISKI 152
>At3g24590.1 68416.m03089 signal peptidase I family protein contains
Pfam profile: PF00461 signal peptidase I
Length = 291
Score = 45.2 bits (102), Expect = 4e-05
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +1
Query: 556 VPRGHVWLEGDNSSNSADSRIYGPVPAGLIRSRVVCRVWPLDKIT 690
VP V++ GDN +NS DS ++GP+P I R V R WP ++++
Sbjct: 234 VPENSVFVMGDNRNNSYDSHVWGPLPLKNIIGRSVFRYWPPNRVS 278
>At2g30440.1 68415.m03709 chloroplast thylakoidal processing
peptidase identical to chloroplast thylakoidal
processing peptidase [Arabidopsis thaliana] GI:2769566;
contains Pfam profile PF00461: Signal peptidase I;
non-consensus CG acceptor site at the intron|exon 8
boundary
Length = 340
Score = 45.2 bits (102), Expect = 4e-05
Identities = 20/45 (44%), Positives = 29/45 (64%)
Frame = +1
Query: 556 VPRGHVWLEGDNSSNSADSRIYGPVPAGLIRSRVVCRVWPLDKIT 690
VP+G+V++ GDN + S DS +GP+P I R V R WP K++
Sbjct: 279 VPKGYVFVLGDNRNKSFDSHNWGPLPIENIVGRSVFRYWPPSKVS 323
Score = 27.9 bits (59), Expect = 7.2
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 364 SMEPTLESNNILLTEHISPRLQKLRRGDIIIAKSP 468
SM PTL+ + ++ E +S +K DI+I K+P
Sbjct: 184 SMYPTLDKGDRVMAEKVSYFFRKPEVSDIVIFKAP 218
>At1g06870.1 68414.m00731 signal peptidase, putative similar to
chloroplast thylakoidal processing peptidase GB:CAA71502
GI:2769566 from [Arabidopsis thaliana]; contains Pfam
profile PF00461: Signal peptidase I
Length = 367
Score = 45.2 bits (102), Expect = 4e-05
Identities = 20/47 (42%), Positives = 29/47 (61%)
Frame = +1
Query: 556 VPRGHVWLEGDNSSNSADSRIYGPVPAGLIRSRVVCRVWPLDKITSL 696
VP G+V++ GDN + S DS +GP+P I R V R WP K++ +
Sbjct: 306 VPEGYVFVLGDNRNKSFDSHNWGPLPIKNIIGRSVFRYWPPSKVSDI 352
>At2g26330.1 68415.m03159 leucine-rich repeat protein kinase,
putative (ERECTA) identical to uncharacterized receptor
protein kinase ERECTA [Arabidopsis thaliana]
gi|1389566|dbj|BAA11869; contains Pfam domains PF00560:
Leucine Rich Repeat and PF00069: Protein kinase domain
Length = 976
Score = 35.1 bits (77), Expect = 0.048
Identities = 31/92 (33%), Positives = 40/92 (43%), Gaps = 2/92 (2%)
Frame = +1
Query: 379 LESNNILLTEHISPRLQKLRR-GDIIIAKSP-SNPRQNICKRIKGLPGDKVRGNFPKRSQ 552
LE N+ LT HI P L KL D+ +A + P + L V GN K S
Sbjct: 336 LELNDNHLTGHIPPELGKLTDLFDLNVANNDLEGPIPDHLSSCTNLNSLNVHGN--KFSG 393
Query: 553 VVPRGHVWLEGDNSSNSADSRIYGPVPAGLIR 648
+PR LE N + + I GP+P L R
Sbjct: 394 TIPRAFQKLESMTYLNLSSNNIKGPIPVELSR 425
>At3g23550.1 68416.m02963 MATE efflux family protein similar to
ripening regulated protein DDTFR18 [Lycopersicon
esculentum] GI:12231296; contains Pfam profile: PF01554
uncharacterized membrane protein family
Length = 469
Score = 32.3 bits (70), Expect = 0.34
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Frame = -3
Query: 575 QTCPLGTT*LRFGKLPLTLSPGSPFILLHIFCLGFDGL-LAMIISPRLSFWSLG 417
QT + T + F LPL ++ G+ + L+H+ LGF G +A IS ++F SLG
Sbjct: 176 QTQCIVTPLVLFSFLPLVINIGTTYALVHLAGLGFIGAPIATSISLWIAFVSLG 229
>At5g56810.1 68418.m07089 F-box family protein contains F-box domain
Pfam:PF00646
Length = 435
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = -3
Query: 494 LHIFCLGFDG--LLAMIIS--PRLSFWSLGDMCSVNRMLFDSSVGSIDGPEHMTKSPIYS 327
L++ C+ F+ + ++S P L L +CSV R LF SV S+ + + YS
Sbjct: 169 LYLTCVNFENEESFSKLLSACPVLEDLFLQRLCSVGRFLFSISVPSLQRLTYTKEQAYYS 228
Query: 326 NVQCVIQ 306
N + +++
Sbjct: 229 NDEAILE 235
>At5g59680.1 68418.m07482 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 882
Score = 29.9 bits (64), Expect = 1.8
Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Frame = +1
Query: 286 GYALQYACITHCTFEYIGDFVMCSGPSMEPTLESNNILLTEHISPRLQKLRRGDIIIAKS 465
G L+ A EY+ + C+ P + +++ NILL EH +L D +++S
Sbjct: 677 GTRLRIAAEAALGLEYL--HIGCTPPMVHRDVKTTNILLDEHYKAKL-----ADFGLSRS 729
Query: 466 -PSNPRQNICKRIKGLPGDKVRGNFPKRSQVVPRGHVWLE 582
P ++ I G PG ++S V G V LE
Sbjct: 730 FPVGGESHVSTVIAGTPGYLDPDRLSEKSDVYSFGIVLLE 769
>At3g23560.1 68416.m02964 MATE efflux family protein similar to
ripening regulated protein DDTFR18 [Lycopersicon
esculentum] GI:12231296; contains Pfam profile: PF01554
uncharacterized membrane protein family
Length = 477
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Frame = -3
Query: 542 FGKLPLTLSPGSPFILLHIFCLGFDGL-LAMIISPRLSFWSLGD--MCS 405
F +PL ++ + ++L+++ LGF G +A IS ++F SLG MCS
Sbjct: 195 FSFVPLVINIATAYVLVYVAGLGFIGAPIATSISLWIAFLSLGTYVMCS 243
>At2g07300.1 68415.m00837 hypothetical protein
Length = 219
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 257 TFLAKLVVS*VTPYSMLV*HIVRSNILV-ILSCVLDHQW 370
TFL ++++ TP+ ++ H VR + LV +L ++D W
Sbjct: 76 TFLGTVLLNNFTPFDYILEHSVRKDTLVDLLGALIDFDW 114
>At1g74540.1 68414.m08636 cytochrome P450, putative similar to
cytochrome P450 GB:O48922 [Glycine max]; contains Pfam
profile: PF00067 cytochrome P450
Length = 497
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Frame = -3
Query: 428 WSLGDM--CSVNRMLFDSSVGSIDGPEH-MTKS--PIYSNVQCVIQAYCKA*PMKPQVLP 264
W++ +M C + + S+ G E MT+S PI +QCV++ + P P +LP
Sbjct: 303 WAMAEMIKCPTVQEKAQQELDSVVGSERLMTESDIPILPYLQCVVKEALRLHPSTPLMLP 362
Query: 263 KKFMNVIF 240
K ++
Sbjct: 363 HKASETVW 370
>At3g16857.2 68416.m02153 two-component responsive regulator family
protein / response regulator family protein contains
Pfam profile: PF00072 response regulator receiver
domain; similar to ARR1 protein GB:BAA74528 from
[Arabidopsis thaliana] (Plant Cell Physiol. (1998) 39
(11), 1232-1239)
Length = 690
Score = 28.7 bits (61), Expect = 4.1
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +1
Query: 427 QKLRRGDI-IIAKSPSNPRQN-ICKRIKGLPGDKVRGNFPKRSQVVPRGHVWLEGDNSSN 600
Q L RG ++ S S+ RQ + RI G R N P+ S+V+P + L +SS+
Sbjct: 447 QSLPRGPPPMLTSSQSSIRQPMLSNRISERSGFSGRNNIPESSRVLPTSYTNLTTQHSSS 506
Query: 601 SADSRIYGP 627
S + P
Sbjct: 507 SMPYNNFQP 515
>At3g16857.1 68416.m02152 two-component responsive regulator family
protein / response regulator family protein contains
Pfam profile: PF00072 response regulator receiver
domain; similar to ARR1 protein GB:BAA74528 from
[Arabidopsis thaliana] (Plant Cell Physiol. (1998) 39
(11), 1232-1239)
Length = 669
Score = 28.7 bits (61), Expect = 4.1
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +1
Query: 427 QKLRRGDI-IIAKSPSNPRQN-ICKRIKGLPGDKVRGNFPKRSQVVPRGHVWLEGDNSSN 600
Q L RG ++ S S+ RQ + RI G R N P+ S+V+P + L +SS+
Sbjct: 447 QSLPRGPPPMLTSSQSSIRQPMLSNRISERSGFSGRNNIPESSRVLPTSYTNLTTQHSSS 506
Query: 601 SADSRIYGP 627
S + P
Sbjct: 507 SMPYNNFQP 515
>At3g13065.1 68416.m01632 leucine-rich repeat transmembrane protein
kinase, putative leucine-rich repeat transmembrane
protein kinase 1 GB:AAC27894 from [Zea mays]
Length = 646
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1
Query: 295 LQYACITHCTFEYIGDFVMCSGPSMEPTLESNNILLTEHISPRL 426
++ A T EY+ + CS P + ++S+NILL ++PRL
Sbjct: 477 IRIALGTAKAIEYLHE--TCSPPLVHKNIKSSNILLDNELNPRL 518
>At4g12410.1 68417.m01962 auxin-responsive family protein similar to
GP:546362 small auxin up RNA {Arabidopsis thaliana};
auxin-induced protein 10A -Glycine max,PID:g255579
Length = 157
Score = 28.3 bits (60), Expect = 5.5
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Frame = +1
Query: 454 IAKSPSNPRQNICKRIKGLPG-DKVR-GNFPKRS-QVVPRGHVWLEGDNSSNSADSRIYG 624
+A+ S + +C K PG +++R G PK+S +VVPRGH+ + S + R+
Sbjct: 39 LARCLSRGAKRLCGGSKKNPGQNQIRLGKDPKKSNRVVPRGHLVVHVGESDDDT-RRVVV 97
Query: 625 PV 630
PV
Sbjct: 98 PV 99
>At2g20240.1 68415.m02365 expressed protein
Length = 713
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -3
Query: 437 LSFWSLGDMCSVNRMLFDSSVGSIDGPEHMTKSPIYS 327
LS +GD CS+NR ++ VG+I E M+ S +S
Sbjct: 274 LSNGYMGDDCSLNRSNYEYLVGNITNSEIMSPSSRHS 310
>At1g48760.2 68414.m05457 delta-adaptin, putative similar to
SP|O14617 Adapter-related protein complex 3 delta 1
subunit (Delta-adaptin 3) {Homo sapiens}; contains Pfam
profile: PF01602 Adaptin N terminal region
Length = 869
Score = 28.3 bits (60), Expect = 5.5
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +1
Query: 328 EYIGDFVMCSGPSMEPTLESNNILLTEHISPRLQKLRRGDIIIAKSPSNP 477
E +GD G ++P +ES+++ T+ IS + KLR D A S S+P
Sbjct: 644 ENLGDLEEICGEHLKP-VESDSVSYTDKISFSVSKLRIRDQQEATSSSSP 692
>At1g48760.1 68414.m05456 delta-adaptin, putative similar to
SP|O14617 Adapter-related protein complex 3 delta 1
subunit (Delta-adaptin 3) {Homo sapiens}; contains Pfam
profile: PF01602 Adaptin N terminal region
Length = 869
Score = 28.3 bits (60), Expect = 5.5
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +1
Query: 328 EYIGDFVMCSGPSMEPTLESNNILLTEHISPRLQKLRRGDIIIAKSPSNP 477
E +GD G ++P +ES+++ T+ IS + KLR D A S S+P
Sbjct: 644 ENLGDLEEICGEHLKP-VESDSVSYTDKISFSVSKLRIRDQQEATSSSSP 692
>At4g19450.1 68417.m02861 nodulin-related weak similarity to
nodule-specific protein Nlj70 [Lotus japonicus]
GI:3329366
Length = 572
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +1
Query: 277 GFIGYALQYACITH-CTFEYIGDFVMC 354
GF+GY +Q+ ITH + YI F+ C
Sbjct: 82 GFVGYGVQWLVITHFISLPYIMVFLCC 108
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,442,054
Number of Sequences: 28952
Number of extensions: 319432
Number of successful extensions: 754
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 723
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 747
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1584903024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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