Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11e24
(725 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_02_0098 + 11720417-11720806,11722151-11722348,11723088-117232... 38 0.006
01_06_0686 - 31246156-31246555,31246667-31246884,31247007-312471... 38 0.008
01_06_0157 + 27075179-27075529,27075849-27076043,27077705-270780... 36 0.025
05_03_0491 + 14682895-14683365,14684127-14684656,14684739-14685213 36 0.043
12_01_0111 - 857627-857975,858123-858334,858428-858550,858662-85... 33 0.17
03_06_0537 + 34585339-34585581,34585668-34585862,34585964-34586845 33 0.17
02_05_0861 - 32302896-32303117,32303224-32303346,32303478-323036... 33 0.17
04_01_0136 + 1522008-1522179,1522528-1522608,1522646-1523174,152... 30 1.6
09_01_0073 - 1057560-1058043,1058199-1058385,1058754-1059062,105... 30 2.2
08_02_1034 + 23823194-23823307,23823399-23823620,23823984-238243... 29 3.8
03_06_0536 + 34578286-34578612,34578718-34578912,34578986-34579870 29 5.0
10_02_0109 - 5368342-5369592 28 6.6
01_07_0170 - 41670694-41671634,41672014-41672982,41673050-41673605 28 6.6
07_03_0694 + 20749814-20750047,20750387-20750578,20750690-207508... 28 8.7
>06_02_0098 +
11720417-11720806,11722151-11722348,11723088-11723210,
11723288-11723499,11723580-11723851,11723931-11724199,
11724976-11724990
Length = 492
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Frame = +1
Query: 310 RDKNHPSVIMWSISNEPRSAKQQA----DAYFAEVVKHVKSMDLSRPVTIAISQYY 465
R + P++ W + NEPR + A+ AE+ +VKS+D + VT+ +Y
Sbjct: 209 RYSDEPAIFAWELMNEPRCVSNSSGPYLQAWIAEMAAYVKSLDTNHLVTVGTEGFY 264
>01_06_0686 -
31246156-31246555,31246667-31246884,31247007-31247129,
31247304-31247501,31247596-31247994
Length = 445
Score = 37.9 bits (84), Expect = 0.008
Identities = 25/112 (22%), Positives = 53/112 (47%), Gaps = 4/112 (3%)
Frame = +1
Query: 253 IFTQSLLNKHKQSLTELIRRDKNHPSVIMWSISNEPRSAKQQA----DAYFAEVVKHVKS 420
++ ++LL + K LT L RD P+++ W + NEPR + + E+ +VKS
Sbjct: 196 VYLKTLLMR-KNHLTGLEYRDD--PTILAWELMNEPRCTSDPSGDTLQRWMEEMSAYVKS 252
Query: 421 MDLSRPVTIAISQYYNTDRAGQHLDVICFNRYNGWYQNTGDLNYIVSKVVEE 576
+D +T+ +Y + + L++ W+ N ++I + +++
Sbjct: 253 IDKKHLLTVGTEGFYGPTSSQEKLNI----NPGEWFPNNYGADFIRNSKIQD 300
>01_06_0157 +
27075179-27075529,27075849-27076043,27077705-27078036,
27078157-27078577
Length = 432
Score = 36.3 bits (80), Expect = 0.025
Identities = 17/65 (26%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Frame = +1
Query: 283 KQSLTELIRRDKNHPSVIMWSISNEPRS----AKQQADAYFAEVVKHVKSMDLSRPVTIA 450
K ++T + RD P+++ W + NEPR + + ++ E+ HVKS+D + + +
Sbjct: 188 KNTITGVAYRDD--PTILAWELMNEPRCQSDLSGRTVQSWITEMAAHVKSIDRNHMLEVG 245
Query: 451 ISQYY 465
+ +Y
Sbjct: 246 LEGFY 250
>05_03_0491 + 14682895-14683365,14684127-14684656,14684739-14685213
Length = 491
Score = 35.5 bits (78), Expect = 0.043
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Frame = +1
Query: 316 KNHPSVIMWSISNEPRSAKQQA----DAYFAEVVKHVKSMDLSRPVTIAISQYY 465
++ P+++ W + NEPR A A+ AE+ HVKS+D + + + +Y
Sbjct: 236 RDDPTIMAWELMNEPRCASDPTGDTLQAWIAEMAFHVKSVDPAHLLGVGAEGFY 289
>12_01_0111 -
857627-857975,858123-858334,858428-858550,858662-858856,
859259-859498
Length = 372
Score = 33.5 bits (73), Expect = 0.17
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = +1
Query: 316 KNHPSVIMWSISNEPRSAKQQA----DAYFAEVVKHVKSMDLSRPVTIAISQYY 465
K+ P+++ W + NEPR + A+ E+ +VKS+D + I I +Y
Sbjct: 160 KDDPTILAWELINEPRCPSDPSGDTLQAWIEEMASYVKSIDPVHLLEIGIEGFY 213
>03_06_0537 + 34585339-34585581,34585668-34585862,34585964-34586845
Length = 439
Score = 33.5 bits (73), Expect = 0.17
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = +1
Query: 316 KNHPSVIMWSISNEPR----SAKQQADAYFAEVVKHVKSMDLSRPVTIAISQYYNTDRAG 483
K+ P++ W + NEPR A+ E+ +VKS+D VT + +Y AG
Sbjct: 161 KDDPTIFAWELMNEPRCYADPTGAMVQAWVEEMAPYVKSVDGRHLVTPGLEGFYG---AG 217
Query: 484 QH 489
+H
Sbjct: 218 EH 219
>02_05_0861 -
32302896-32303117,32303224-32303346,32303478-32303666,
32303755-32304108
Length = 295
Score = 33.5 bits (73), Expect = 0.17
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Frame = +1
Query: 316 KNHPSVIMWSISNEPRS----AKQQADAYFAEVVKHVKSMDLSRPVTIAISQYY 465
K+ P++ W + NEPR + + A+ E+ +VKS+D + V I + +Y
Sbjct: 196 KDDPTIFAWELINEPRCQSDLSGKTLQAWVTEMAGYVKSVDPNHMVEIGLEGFY 249
>04_01_0136 +
1522008-1522179,1522528-1522608,1522646-1523174,
1523301-1523616,1523653-1523847
Length = 430
Score = 30.3 bits (65), Expect = 1.6
Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 3/89 (3%)
Frame = +1
Query: 49 RGFGMHEDSDLRGKGWDPVLWVKNFNLIKWIGANAFRTSHYPYAEEIYQLADEYGI-MII 225
RGF R K V F++ IGA AF H Y E L E + I+
Sbjct: 123 RGFDKGTRGVRRFKYHQLVSATNQFSMENKIGAGAFGEVHKGYLTE---LGREVAVKKIL 179
Query: 226 DECPSGDTDIF--TQSLLNKHKQSLTELI 306
EC G+ D F Q++ +++L EL+
Sbjct: 180 KECREGNKDFFDEVQTISRAKQKNLVELL 208
>09_01_0073 -
1057560-1058043,1058199-1058385,1058754-1059062,
1059427-1060269,1061572-1062552,1063189-1063516
Length = 1043
Score = 29.9 bits (64), Expect = 2.2
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
Frame = +1
Query: 148 NAFRTSHYPYA--EEIYQLADEYGIMIIDECPS-GDTDIFTQ---SLLNKHKQSLTELIR 309
N+ + S Y Y +++ +ADEY + E P D +++ S +NK K+ + +I
Sbjct: 97 NSLKYSGYKYIHQDKLRDIADEYNNSMKSEWPKIRDKELYFYRELSRINKQKKEKSLVIE 156
Query: 310 RDKNHPSVIMWSISNEPRSAKQQADAYFAE 399
+ I S EPR Q+ D +E
Sbjct: 157 TPRTQEIKIEQIKSEEPREEIQKLDKVLSE 186
>08_02_1034 +
23823194-23823307,23823399-23823620,23823984-23824309,
23824648-23824777,23825145-23825441,23825550-23825815,
23827835-23828333,23828902-23828993,23829571-23829735,
23829817-23830204,23830275-23830393,23830494-23830524,
23830675-23830880,23830970-23831014,23831120-23831201,
23832210-23832398,23834499-23834602,23834669-23834759,
23835097-23835225,23835425-23835556,23835779-23835949,
23836143-23836171,23836214-23836301,23836313-23836391,
23836666-23836844
Length = 1390
Score = 29.1 bits (62), Expect = 3.8
Identities = 20/65 (30%), Positives = 29/65 (44%)
Frame = +1
Query: 529 QNTGDLNYIVSKVVEEATEFHRRHNKPVIMTEYGADTVAGLHFIPEYVWSEEYQVALMSE 708
+N GDL SKV EA F RH ++ D + L +P V ++E + L +
Sbjct: 49 ENEGDLIMAASKVTPEAMAFIVRHGTGIVCVSMKEDDLERLE-LPLMVTTKENEEKLRTA 107
Query: 709 HXQSV 723
SV
Sbjct: 108 FTVSV 112
>03_06_0536 + 34578286-34578612,34578718-34578912,34578986-34579870
Length = 468
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Frame = +1
Query: 316 KNHPSVIMWSISNEPRSAKQ----QADAYFAEVVKHVKSMDLSRP-VTIAISQYY 465
K+ P++ W + NEPR A+ E+ +VK +D R VT + +Y
Sbjct: 189 KDDPTIFAWELMNEPRCDADPTGGMVQAWVEEMAPYVKRVDGGRHLVTAGLEGFY 243
>10_02_0109 - 5368342-5369592
Length = 416
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -1
Query: 632 APYSVMMTGLLCRRWNSVASSTTLLTM 552
+P ++ +CRRW VASS T L +
Sbjct: 34 SPAALARAATVCRRWRRVASSPTFLRL 60
>01_07_0170 - 41670694-41671634,41672014-41672982,41673050-41673605
Length = 821
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/55 (23%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Frame = +1
Query: 340 WSISNEPRSAKQQADAYFAEVVKHVKSMDLSRPV---TIAISQYYNTDRAGQHLD 495
W + P + K A AY ++ HV RPV T + + ++ G ++
Sbjct: 748 WPSAGAPAATKDNARAYVQNLINHVSKGTPKRPVPIETYIFAMFNENEKTGDEIE 802
>07_03_0694 +
20749814-20750047,20750387-20750578,20750690-20750870,
20751254-20751666
Length = 339
Score = 27.9 bits (59), Expect = 8.7
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = -1
Query: 299 SVSDCLCLFSRDCVKMSVSPLGHSSMIIIPYSSANWYISS-AYG*CDVRNAFAPIHLIKL 123
S +D L L +RD V M+ + +S+ +P + +SS A ++ ++FA +K
Sbjct: 127 SCADILALAARDAVSMAAGNINGASLWQVPTGRLDGRVSSAAEAVANLPSSFADFAKLKE 186
Query: 122 KFFTHKTGSHPLPLRSESSCIPN 54
+F + L + S + I N
Sbjct: 187 QFGSKGLNVQDLAILSGAHAIGN 209
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,878,887
Number of Sequences: 37544
Number of extensions: 448667
Number of successful extensions: 1322
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1287
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1321
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1898162308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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