Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11e22
         (632 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   4.3  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    22   5.7  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    22   5.7  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    22   5.7  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    22   5.7  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   7.5  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   9.9  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -1

Query: 65  SDPSKQFYTIQMRSPRSVY 9
           S+P +  Y+  +R PRS++
Sbjct: 375 SEPRRSIYSSLLRYPRSIF 393


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -1

Query: 431 IISLNSFLILGWLFWLAVP 375
           II + S  I  WL W AVP
Sbjct: 312 IILVTSSFITFWLEWNAVP 330


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -1

Query: 431 IISLNSFLILGWLFWLAVP 375
           II + S  I  WL W AVP
Sbjct: 281 IILVTSSFITFWLEWNAVP 299


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -1

Query: 431 IISLNSFLILGWLFWLAVP 375
           II + S  I  WL W AVP
Sbjct: 332 IILVTSSFITFWLEWNAVP 350


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -1

Query: 431 IISLNSFLILGWLFWLAVP 375
           II + S  I  WL W AVP
Sbjct: 281 IILVTSSFITFWLEWNAVP 299


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
 Frame = +3

Query: 183  KRTSYKP-QPAPTSFSYPQSAAHKPSLSGWQEKPAT 287
            KR  Y P QPA       Q+ A   S    + KPAT
Sbjct: 993  KRGRYTPPQPANAQQGQAQAQAKPQSQEANKPKPAT 1028


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 380 QPAKTTTQVSRNCSKK 427
           QP  TTT V+ +C ++
Sbjct: 89  QPTSTTTSVTPSCRRQ 104


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,499
Number of Sequences: 438
Number of extensions: 3030
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18949215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)