Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11e19
(649 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.) 122 3e-28
SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 5e-11
SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21) 60 1e-09
SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 6e-09
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 57 1e-08
SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25) 56 3e-08
SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 6e-08
SB_20581| Best HMM Match : RRM_1 (HMM E-Value=1.7e-07) 51 7e-07
SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 49 3e-06
SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 5e-06
SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 5e-06
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 48 7e-06
SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18) 48 7e-06
SB_59562| Best HMM Match : RRM_1 (HMM E-Value=6.1e-23) 47 1e-05
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 47 1e-05
SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24) 47 2e-05
SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36) 46 3e-05
SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39) 45 5e-05
SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07) 45 6e-05
SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 8e-05
SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18) 44 1e-04
SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16) 44 1e-04
SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23) 43 2e-04
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 43 2e-04
SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0) 42 4e-04
SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) 42 4e-04
SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15) 41 8e-04
SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35) 39 0.003
SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0) 39 0.003
SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_52029| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 38 0.007
SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_13046| Best HMM Match : La (HMM E-Value=5e-23) 38 0.009
SB_52333| Best HMM Match : RRM_1 (HMM E-Value=2.3e-16) 37 0.012
SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.012
SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) 37 0.016
SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35) 36 0.021
SB_12089| Best HMM Match : RRM_1 (HMM E-Value=7.4e-13) 36 0.038
SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.087
SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0) 34 0.11
SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035) 33 0.15
SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_16504| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19) 32 0.35
SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.35
SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.46
SB_37827| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.46
SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24) 31 1.1
SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23) 31 1.1
SB_42066| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017) 30 1.4
SB_46575| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0) 30 1.4
SB_30739| Best HMM Match : Keratin_B2 (HMM E-Value=0.87) 30 1.9
SB_38878| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15) 29 2.5
SB_46333| Best HMM Match : EGF (HMM E-Value=1.10001e-40) 29 3.3
SB_41292| Best HMM Match : RRM_1 (HMM E-Value=0.0085) 29 3.3
SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07) 29 3.3
SB_14150| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0) 29 4.3
SB_34470| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_43550| Best HMM Match : Laminin_EGF (HMM E-Value=0) 28 5.7
SB_38456| Best HMM Match : BTB (HMM E-Value=8.8e-26) 28 5.7
SB_43406| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_20454| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_13504| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_48031| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_21838| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_6097| Best HMM Match : Chitin_bind_3 (HMM E-Value=0.7) 28 7.5
>SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 122 bits (294), Expect = 3e-28
Identities = 55/76 (72%), Positives = 65/76 (85%)
Frame = +3
Query: 144 RPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFE 323
R PP IDGM SLKVDNLTYRTT EDL++VF++ G++GDIYIPRDR T ESRGFAFVRF+E
Sbjct: 7 RGPPEIDGMTSLKVDNLTYRTTVEDLKQVFKKYGDLGDIYIPRDRNTHESRGFAFVRFYE 66
Query: 324 RRDAEEALDTMDGRML 371
+RDAE+A+D MD L
Sbjct: 67 KRDAEDAMDCMDATCL 82
Score = 29.5 bits (63), Expect = 2.5
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 367 CWTAGNFAFRWRDMVAP 417
C A F FRWRDMV P
Sbjct: 81 CLMAEKFVFRWRDMVVP 97
>SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 64.9 bits (151), Expect = 5e-11
Identities = 31/73 (42%), Positives = 47/73 (64%)
Frame = +3
Query: 183 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 362
V NL Y T DL +VFER G+V + I RD+ TRESRG AF+ F +R+ A+ A+ ++
Sbjct: 14 VGNLPYSLTNSDLHKVFERYGKVVKVTILRDKETRESRGVAFILFIDRQSAQNAVAAVNK 73
Query: 363 RMLDGRELRVQMA 401
+ + GR ++ +A
Sbjct: 74 KQMFGRTIKCTIA 86
>SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21)
Length = 304
Score = 60.5 bits (140), Expect = 1e-09
Identities = 26/76 (34%), Positives = 45/76 (59%)
Frame = +3
Query: 174 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDT 353
+++V NL+ T DL+ +F G + I++ +D++T +S+GFAF+ F R DA A++
Sbjct: 182 TIRVTNLSEETRESDLQELFRPLGPISRIFLAKDKFTNQSKGFAFINFVHREDAARAIEV 241
Query: 354 MDGRMLDGRELRVQMA 401
+ G D L V+ A
Sbjct: 242 LSGFGYDHLILNVEWA 257
>SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 58.0 bits (134), Expect = 6e-09
Identities = 27/73 (36%), Positives = 45/73 (61%)
Frame = +3
Query: 183 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 362
+ NL ++ DL+ F R +V D+ + DR T+ RGFAFV F +++ E+A++ +DG
Sbjct: 234 IGNLDFKVNEADLQDRFSRY-DVVDVQVISDRETQRPRGFAFVTFGSKKNMEDAINELDG 292
Query: 363 RMLDGRELRVQMA 401
+ DGR ++V A
Sbjct: 293 QEFDGRSMKVNQA 305
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/43 (44%), Positives = 25/43 (58%)
Frame = +3
Query: 273 DRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELRVQMA 401
DR T RGF FV F + ++A+D DG LDGR ++V A
Sbjct: 43 DRETGRPRGFGFVTFGSEDEMDKAIDKFDGEDLDGRPMKVNKA 85
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 56.8 bits (131), Expect = 1e-08
Identities = 27/73 (36%), Positives = 42/73 (57%)
Frame = +3
Query: 177 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTM 356
L V +LT + ++ +F G V + +P DR SRGFA+V + + + E+AL M
Sbjct: 1159 LYVAHLTRNVNKDHVQEIFSVYGRVKTVDLPTDRTNNLSRGFAYVEYVDPEECEKALKHM 1218
Query: 357 DGRMLDGRELRVQ 395
DG +DG+E+ VQ
Sbjct: 1219 DGGQIDGQEIAVQ 1231
>SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25)
Length = 159
Score = 55.6 bits (128), Expect = 3e-08
Identities = 27/73 (36%), Positives = 40/73 (54%)
Frame = +3
Query: 183 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 362
+ NL+Y + L F C +V D+ + DR T RGF FV F + + E+A+D DG
Sbjct: 9 IGNLSYSVDEQALEEKFHGC-DVVDVKVITDRETGRPRGFGFVTFGSKEEMEKAIDEFDG 67
Query: 363 RMLDGRELRVQMA 401
+ DGR ++V A
Sbjct: 68 QDFDGRPMKVNQA 80
>SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 54.8 bits (126), Expect = 6e-08
Identities = 31/76 (40%), Positives = 43/76 (56%)
Frame = +3
Query: 174 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDT 353
SL V NL+Y TT + L FE C I+ DR + ESRGF FV + + A++ L
Sbjct: 290 SLIVRNLSYDTTTDSLGAAFEGCSNAKVIF---DRESGESRGFGFVDYDDVETAKKVLSE 346
Query: 354 MDGRMLDGRELRVQMA 401
M G +DGR++R+ A
Sbjct: 347 MAGAEVDGRQVRLDFA 362
>SB_20581| Best HMM Match : RRM_1 (HMM E-Value=1.7e-07)
Length = 97
Score = 51.2 bits (117), Expect = 7e-07
Identities = 21/55 (38%), Positives = 35/55 (63%)
Frame = +3
Query: 201 RTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGR 365
R ED+R FE+ G + D+++ +D+ T+E+RG +V+F + A A + MDGR
Sbjct: 33 RHNAEDIRSAFEQYGTIEDVWVVKDKATKENRGVCYVKFVKASSAALACEEMDGR 87
>SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 50.0 bits (114), Expect = 2e-06
Identities = 26/78 (33%), Positives = 45/78 (57%)
Frame = +3
Query: 168 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEAL 347
M + + N+ + ++ R FE G + D+++ R+ GFAF F +RRDAE+A+
Sbjct: 1 MSRVYIGNIGDNASKREIEREFETFGPLRDVWVARN-----PPGFAFCVFEDRRDAEDAV 55
Query: 348 DTMDGRMLDGRELRVQMA 401
+DGR + G+ RV++A
Sbjct: 56 RELDGRYICGQRARVELA 73
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 49.2 bits (112), Expect = 3e-06
Identities = 26/76 (34%), Positives = 41/76 (53%)
Frame = +3
Query: 165 GMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEA 344
G L V +L + T ++ VFE G V + + D T S+G+ FV+F E A+ A
Sbjct: 240 GPTRLYVGSLHFNITEAMVKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAEAAKRA 299
Query: 345 LDTMDGRMLDGRELRV 392
++ M+G L GR L++
Sbjct: 300 MEQMNGFELAGRPLKI 315
Score = 41.5 bits (93), Expect = 6e-04
Identities = 20/63 (31%), Positives = 34/63 (53%)
Frame = +3
Query: 210 PEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELR 389
P DL F + G+V D+ I DR +R S+G A++ F ++ A+ + G+ L G +
Sbjct: 159 PRDLEEFFSKVGQVSDVRIISDRNSRRSKGIAYIEFTDKSAVPLAIG-LSGQKLLGAPIM 217
Query: 390 VQM 398
V +
Sbjct: 218 VML 220
>SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 48.8 bits (111), Expect = 4e-06
Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Frame = +3
Query: 177 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDT- 353
L V L Y TT +++ F R GE+ + D TR SRGF FVRF + DA+ L T
Sbjct: 117 LIVLGLPYATTESEMKEYFTRFGEIDFCEVKLDPNTRRSRGFGFVRFKKDEDAKNVLSTS 176
Query: 354 --MDGRMLDGR 380
+ GR+ + R
Sbjct: 177 HRIQGRLCEVR 187
Score = 32.3 bits (70), Expect = 0.35
Identities = 22/65 (33%), Positives = 30/65 (46%)
Frame = +3
Query: 123 LLKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 302
L ++ RP ++ L V L TT + L F + GEV D+YIP + R F
Sbjct: 183 LCEVRLPRPKEELNVPKKLFVGRLPESTTEKTLMEYFAQFGEVTDVYIP-----KPFRHF 237
Query: 303 AFVRF 317
FV F
Sbjct: 238 GFVTF 242
>SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 48.4 bits (110), Expect = 5e-06
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Frame = +3
Query: 162 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEE 341
D L V L TT E LR FE GE+ D+ + D T++SRGF +V F + +
Sbjct: 11 DPRAKLFVGGLNRETTNETLREYFEAYGELTDVVVICDSATKKSRGFGYVTFADYKVTRN 70
Query: 342 AL-DTMD--GRMLDGRELRVQMA 401
L D ++ +DG+E+ V+ A
Sbjct: 71 VLKDKVENGAHRIDGKEVEVKRA 93
>SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 48.4 bits (110), Expect = 5e-06
Identities = 25/80 (31%), Positives = 43/80 (53%)
Frame = +3
Query: 162 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEE 341
D +L ++ + + ED++++F G V + RDR T +S G+AFV + DA +
Sbjct: 24 DERTNLIINYVPPSMSQEDIKKIFGTVGNVTSCKLIRDRATGQSLGYAFVNYDNPDDANK 83
Query: 342 ALDTMDGRMLDGRELRVQMA 401
A+ M+G L + L+V A
Sbjct: 84 AVREMNGARLQNKTLKVSFA 103
Score = 41.9 bits (94), Expect = 4e-04
Identities = 24/89 (26%), Positives = 47/89 (52%)
Frame = +3
Query: 126 LKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFA 305
LK+S+ RP +L + L E++ +F+ G++ + +D + E RG
Sbjct: 98 LKVSFARPSSTEIKNANLYISGLPKDMKEEEVEALFKPFGKIITSKVLKD-VSGEGRGTG 156
Query: 306 FVRFFERRDAEEALDTMDGRMLDGRELRV 392
FVRF +R +A+ A+D ++ + L G +++
Sbjct: 157 FVRFDKRCEAQTAIDDLNNKTLPGTNVKL 185
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 48.0 bits (109), Expect = 7e-06
Identities = 24/76 (31%), Positives = 40/76 (52%)
Frame = +3
Query: 174 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDT 353
S+ V N+ Y + E L+ +F G V + DR T + +G+ F + ++ A A+
Sbjct: 26 SVFVGNIPYEASEEQLKEIFSEVGPVISFRLVFDRETGKPKGYGFCEYKDQETALSAMRN 85
Query: 354 MDGRMLDGRELRVQMA 401
++G L+GR LRV A
Sbjct: 86 LNGYELNGRALRVDSA 101
>SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18)
Length = 209
Score = 48.0 bits (109), Expect = 7e-06
Identities = 24/66 (36%), Positives = 35/66 (53%)
Frame = +3
Query: 204 TTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRE 383
TT EDL +F R G + + RD+ T ES +AF+ F + D E A MD ++D R
Sbjct: 131 TTDEDLEIIFSRFGTILSCEVIRDQKTGESLQYAFIEFEKDEDCERAYFKMDNVLIDDRR 190
Query: 384 LRVQMA 401
+ V +
Sbjct: 191 IHVDFS 196
>SB_59562| Best HMM Match : RRM_1 (HMM E-Value=6.1e-23)
Length = 201
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/75 (34%), Positives = 41/75 (54%)
Frame = +3
Query: 177 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTM 356
L V NL +L R FE+ G + +++ R+ GFAFV + + RDAEEA+ +
Sbjct: 6 LYVGNLGRNADSSELERAFEKFGRLSKVWVARN-----PPGFAFVEYEDYRDAEEAVREL 60
Query: 357 DGRMLDGRELRVQMA 401
DG + R +RV+ +
Sbjct: 61 DGANVCDRTIRVEFS 75
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/73 (35%), Positives = 35/73 (47%)
Frame = +3
Query: 183 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 362
V L + L F G++ D+ IP D T + RGF FV F D A+D M+
Sbjct: 9 VGGLAEEVDEKVLHAAFIPFGDITDVQIPMDYTTSKHRGFGFVEFEFAEDTAAAIDNMNE 68
Query: 363 RMLDGRELRVQMA 401
L GR +RV +A
Sbjct: 69 SELFGRTIRVNLA 81
>SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24)
Length = 407
Score = 46.8 bits (106), Expect = 2e-05
Identities = 27/77 (35%), Positives = 39/77 (50%)
Frame = +3
Query: 162 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEE 341
D S+ + NL + E LR +F CG V + + RDR T +GF +V FE +DA
Sbjct: 53 DHQRSVFIGNLPFDIEEEPLRELFTTCGNVESVRLIRDRKTGIGKGFGYV-LFESKDAVV 111
Query: 342 ALDTMDGRMLDGRELRV 392
M+ GR++RV
Sbjct: 112 FALKMNNAEFKGRKIRV 128
>SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36)
Length = 328
Score = 46.0 bits (104), Expect = 3e-05
Identities = 25/63 (39%), Positives = 36/63 (57%)
Frame = +3
Query: 162 DGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEE 341
D + L V L+Y TT E L+ F + GE+ + I D T RGFAFV+F + +A +
Sbjct: 26 DDIGKLFVGGLSYETTKESLKEYFSKYGELVGVDIKMDALTGRPRGFAFVQFKHQSEA-D 84
Query: 342 ALD 350
A+D
Sbjct: 85 AID 87
>SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 45.6 bits (103), Expect = 4e-05
Identities = 24/78 (30%), Positives = 44/78 (56%)
Frame = +3
Query: 168 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEAL 347
M + + +L + ++ F G + D+++ R+ GFAF F +RRDAE+A+
Sbjct: 31 MTKVYIGSLGDNASKREIENEFGYYGPLKDVWVARN-----PPGFAFCIFDDRRDAEDAV 85
Query: 348 DTMDGRMLDGRELRVQMA 401
+DGR + G+ +RV++A
Sbjct: 86 RELDGRYICGQRVRVELA 103
>SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39)
Length = 507
Score = 45.2 bits (102), Expect = 5e-05
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = +3
Query: 183 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRG--FAFVRFFERRDAEEALDTM 356
V NL +DL +F + G + D+ D R G FAFV F + RDAE+A+
Sbjct: 265 VGNLPQDVREKDLHDIFYKYGHIADV----DLKNRRGAGPPFAFVEFEDPRDAEDAVKGR 320
Query: 357 DGRMLDGRELRVQ 395
DG DG +RV+
Sbjct: 321 DGHEFDGYRIRVE 333
>SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07)
Length = 252
Score = 44.8 bits (101), Expect = 6e-05
Identities = 21/48 (43%), Positives = 29/48 (60%)
Frame = +3
Query: 258 IYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELRVQMA 401
+ I DR T RGF FV F + + E+A+D DG+ LDGR ++V A
Sbjct: 125 VNIITDRETGRPRGFGFVTFGSKEEMEKAIDEFDGQDLDGRPMKVNEA 172
>SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 44.4 bits (100), Expect = 8e-05
Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 8/76 (10%)
Frame = +3
Query: 189 NLTYRTTPEDLRRVFERCG-EVGDIYI---PRDRYTRE----SRGFAFVRFFERRDAEEA 344
NL ++ T ++L+ VFE V D+ I PR+ + ++ SRGF FV F DA+ A
Sbjct: 56 NLPFKLTQDELKAVFEAESLTVTDVLIVKEPRNEFYQQQEPRSRGFGFVTFANPEDAQTA 115
Query: 345 LDTMDGRMLDGRELRV 392
+ +++G+ + GR L++
Sbjct: 116 VKSLNGKEVQGRTLKI 131
>SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 781
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/49 (40%), Positives = 30/49 (61%)
Frame = +3
Query: 213 EDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMD 359
EDLR FE G++ + I RD TRE++G+ +V+F + A AL+ D
Sbjct: 67 EDLRSKFESFGDIEYVQIVRDHKTRENKGYGYVKFHKSSTAAMALENCD 115
>SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18)
Length = 291
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/75 (30%), Positives = 40/75 (53%)
Frame = +3
Query: 177 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTM 356
L V + Y + + LR+ F + GE+ + + +DR T++S+G+ FV DA E
Sbjct: 12 LFVGGIPYESGDDALRKFFAQFGEIREAVVIKDRVTKKSKGYGFVT-MATSDAAELACKN 70
Query: 357 DGRMLDGRELRVQMA 401
M++GR+ V +A
Sbjct: 71 KRPMIEGRQANVNLA 85
>SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 721
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/81 (25%), Positives = 45/81 (55%)
Frame = +3
Query: 159 IDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAE 338
++G + L V N+ +D+ +F GE+ ++++ DR T +G+A V + ++A+
Sbjct: 290 VEGWI-LFVTNIHEEAQEDDIHELFSDYGEIKNLHVNLDRRTGFIKGYALVEYETFKEAQ 348
Query: 339 EALDTMDGRMLDGRELRVQMA 401
AL+ ++G + G+ + V A
Sbjct: 349 SALEALNGAEMLGQNISVDWA 369
>SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16)
Length = 842
Score = 43.6 bits (98), Expect = 1e-04
Identities = 27/88 (30%), Positives = 48/88 (54%)
Frame = +3
Query: 123 LLKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGF 302
+L + YG + L V LT + + E LR+ FE+ GE+ + + RD T+ SRGF
Sbjct: 95 ILDIDYGTS--HFSSTLELSVIPLT-QASAEGLRQHFEKFGELKECVVMRDPVTKRSRGF 151
Query: 303 AFVRFFERRDAEEALDTMDGRMLDGREL 386
F+ F + + + L++ + LDG+++
Sbjct: 152 GFLTFKDPKAVDVVLNS-GAQELDGKKM 178
>SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23)
Length = 362
Score = 43.2 bits (97), Expect = 2e-04
Identities = 29/94 (30%), Positives = 48/94 (51%)
Frame = +3
Query: 117 SILLKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESR 296
++LLK S+ P P DG +L + +L T DL + F+ G V + D+ T S+
Sbjct: 262 AVLLKESHYTPGP--DGS-NLFIYHLPQEFTDADLMQTFQPFGTVISAKVFIDKQTNMSK 318
Query: 297 GFAFVRFFERRDAEEALDTMDGRMLDGRELRVQM 398
F FV + A+ A+ M+G + + L+VQ+
Sbjct: 319 CFGFVSYDNVMSAQNAIQHMNGFQIGAKRLKVQL 352
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/76 (27%), Positives = 42/76 (55%)
Frame = +3
Query: 174 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDT 353
++ V L + + + +F + G V ++++P+DR T+ +G+ FV F DA+ A+
Sbjct: 14 TIYVGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEFLGEEDADYAIKV 73
Query: 354 MDGRMLDGRELRVQMA 401
M+ + G+ +RV A
Sbjct: 74 MNMIKVYGKPIRVNKA 89
Score = 34.3 bits (75), Expect = 0.087
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +3
Query: 264 IPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELRVQMA 401
I RD T S+GFAF+ F ++ A++ M+G+ L R + V A
Sbjct: 132 IMRDSDTGNSKGFAFINFASFDASDAAIEAMNGQYLCNRPITVSYA 177
>SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/72 (29%), Positives = 38/72 (52%)
Frame = +3
Query: 174 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDT 353
+L V N+ Y E + +F +CG V + I D ++ +GF FV + +A+ A+ T
Sbjct: 276 TLYVYNIGYDANQEGITALFGQCGIVNKVDIMWDWQRQQCKGFCFVTMATQEEAQNAIQT 335
Query: 354 MDGRMLDGRELR 389
++G M + L+
Sbjct: 336 LNGFMYTNKPLQ 347
Score = 37.5 bits (83), Expect = 0.009
Identities = 21/82 (25%), Positives = 40/82 (48%)
Frame = +3
Query: 147 PPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFER 326
P + +L V+ + T + R +FE + + I R + + S GF FV +
Sbjct: 39 PQEAQESKTTLIVNYIPQDMTDQTFRMMFEAVASLNNCKIVRHKPSGWSYGFGFVDYNTT 98
Query: 327 RDAEEALDTMDGRMLDGRELRV 392
DA++A+D ++G + + L+V
Sbjct: 99 EDAQKAIDKLNGFTIGNKVLKV 120
>SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 1026
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/88 (25%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Frame = +3
Query: 150 PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERR 329
P + +++ + NL++ +T +++ +F++ G++ + D T+ S+G AFV++
Sbjct: 409 PSDVKEGLTVFIRNLSFDSTQKNITNLFKQFGDIAYCKVVVDHLTQHSKGSAFVKYRSAE 468
Query: 330 DAEEALDTMD----GRMLDGRELRVQMA 401
+ L D G LDG L+V +A
Sbjct: 469 SVTQCLAATDEDSEGLFLDGNRLQVDLA 496
>SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 593
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/75 (29%), Positives = 38/75 (50%)
Frame = +3
Query: 168 MVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEAL 347
M + V ++ + E +R F G + I + D + +GFAFV + A+ AL
Sbjct: 101 MCRVYVGSINFELREEHIRTAFHPFGPINKIDLSWDPLNMKHKGFAFVEYDLPEAAQLAL 160
Query: 348 DTMDGRMLDGRELRV 392
+ M+G +L GR ++V
Sbjct: 161 EQMNGVLLGGRNIKV 175
>SB_29577| Best HMM Match : RRM_1 (HMM E-Value=8.5e-15)
Length = 171
Score = 41.1 bits (92), Expect = 8e-04
Identities = 21/58 (36%), Positives = 34/58 (58%)
Frame = +3
Query: 216 DLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELR 389
++++ FE+ G V I + R + + S+G+AFV F A+ A DTM M+ GR L+
Sbjct: 113 EIKKFFEQFGTVNRIRLSRSKKSARSKGYAFVEFACDEVAKIAADTMHNYMMFGRLLK 170
>SB_31413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +3
Query: 213 EDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTM-DGRMLDGRELR 389
++L + E+CGE+ + + D T ++GFAF F E+ A +A+ T+ D + GR L
Sbjct: 167 DELIPLLEKCGEIREFRLQMDPATGLNKGFAFCTFTEQTSAYQAITTLNDKDIRPGRRLA 226
Query: 390 V 392
+
Sbjct: 227 I 227
>SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 39.5 bits (88), Expect = 0.002
Identities = 26/82 (31%), Positives = 42/82 (51%)
Frame = +3
Query: 156 RIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDA 335
+ G L V NL E+++ +F++ GEV +++I +++ GF F+R R A
Sbjct: 48 KFTGRCRLFVGNLI-DCDEEEMKEMFKKYGEVAEVFINKEK------GFGFIRLDTRLHA 100
Query: 336 EEALDTMDGRMLDGRELRVQMA 401
E A +D GR LRV+ A
Sbjct: 101 EAAKAGLDMATRKGRTLRVRFA 122
>SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35)
Length = 1118
Score = 39.1 bits (87), Expect = 0.003
Identities = 26/85 (30%), Positives = 46/85 (54%)
Frame = +3
Query: 138 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 317
YG PP R ++ ++NL+ R + +DL+ + C +VGD+ R+ G + F
Sbjct: 89 YG-PPVRTPWRMT--IENLSSRVSWQDLK---DFCRQVGDVTYGDAHKQRQGEGV--IEF 140
Query: 318 FERRDAEEALDTMDGRMLDGRELRV 392
+RD + AL +DG L+G+ +R+
Sbjct: 141 SCKRDLKRALKKLDGEELNGKRIRL 165
>SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 718
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/77 (32%), Positives = 38/77 (49%)
Frame = +3
Query: 171 VSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALD 350
V+L + NL E LR F G + + +D S+GF FV F +A +A+
Sbjct: 212 VNLYIKNLDDPIDDERLREEFSPYGTISSAKVMKDD-KGNSKGFGFVCFSSPEEATKAVT 270
Query: 351 TMDGRMLDGRELRVQMA 401
M+GR+L + L V +A
Sbjct: 271 EMNGRILISKPLYVALA 287
Score = 36.7 bits (81), Expect = 0.016
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +3
Query: 213 EDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGREL 386
E ++ + G++ + + D + S+GF FV F +AEEA++ ++G+ + GR L
Sbjct: 123 EQMKEICAEAGKIVSLKVMTDPEGK-SKGFGFVSFETPEEAEEAVNVLNGKEIGGRRL 179
>SB_10628| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1208
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/50 (34%), Positives = 31/50 (62%)
Frame = +3
Query: 243 GEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELRV 392
GE+ ++ + RD+ T + +GF F+ + ++R A+D +G L GR +RV
Sbjct: 3 GEIVNVNLVRDKKTGKQKGFCFLCYEDQRSTILAVDNFNGIKLGGRTIRV 52
>SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 291
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/75 (29%), Positives = 37/75 (49%)
Frame = +3
Query: 177 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTM 356
L + NL + + ++ + FE G V + I RD+ + SRGF FV A++ M
Sbjct: 11 LYIGNLNFNSDEGEIEQAFEEFG-VEKVDILRDKESGRSRGFGFVLLQSADQIAPAIEKM 69
Query: 357 DGRMLDGRELRVQMA 401
+ + GR + V +A
Sbjct: 70 NQSSVGGRNITVALA 84
>SB_52029| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 462
Score = 37.9 bits (84), Expect = 0.007
Identities = 24/72 (33%), Positives = 38/72 (52%)
Frame = +3
Query: 183 VDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 362
V NL Y+ + L+ F+ G V I D ++S+G V+F +A A++ + G
Sbjct: 189 VTNLDYKVNWQKLKDTFKCAGHVIRAEIMEDD-EKKSKGMGTVQFETPMEAMNAVNLLHG 247
Query: 363 RMLDGRELRVQM 398
+ML R LRV+M
Sbjct: 248 KMLMDRALRVRM 259
>SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 37.5 bits (83), Expect = 0.009
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +3
Query: 213 EDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRML-DGRELR 389
++L VFE CG + D + D + ++GFAF F + +A+ A+ +D + + G+ L
Sbjct: 166 DELIPVFEECGHIYDFRLMIDPISGLTKGFAFCTFSNKDEAQNAVKKLDNKEIRPGKRLG 225
Query: 390 V 392
V
Sbjct: 226 V 226
Score = 36.7 bits (81), Expect = 0.016
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Frame = +3
Query: 153 PRIDGMVSLKV---DNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFE 323
P D M +KV NL+ T E L+ + + G V DR ++ + +AFV F E
Sbjct: 320 PDDDAMKKVKVVYLRNLSPSITEEKLKEEYSQYGAV-------DR-VKKLKDYAFVHFTE 371
Query: 324 RRDAEEALDTMDGRMLDGRELRVQMA 401
R A +A++ DG+ +DG ++ +A
Sbjct: 372 RDHALKAIEETDGKEMDGLKIEASLA 397
>SB_13046| Best HMM Match : La (HMM E-Value=5e-23)
Length = 442
Score = 37.5 bits (83), Expect = 0.009
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +3
Query: 186 DNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEAL 347
+ L + + L++VF G+V + +PR ++ E +GFAF+ F ++ AE +
Sbjct: 93 EKLPFHADHDWLKKVFSEFGKVLYVSLPRFKHNGEIKGFAFIEFESKQQAEHVV 146
>SB_52333| Best HMM Match : RRM_1 (HMM E-Value=2.3e-16)
Length = 76
Score = 37.1 bits (82), Expect = 0.012
Identities = 22/76 (28%), Positives = 40/76 (52%)
Frame = +3
Query: 174 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDT 353
S+ V N+ + L+ VF + G++ + R+ R + FV F +R A +A+D
Sbjct: 3 SIYVRNVPLPMSETQLKAVFTKYGQIEKV--------RKIRDYGFVYFAKRESAVQAIDG 54
Query: 354 MDGRMLDGRELRVQMA 401
++G +DG +L V +A
Sbjct: 55 INGAYIDGCKLEVSLA 70
>SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 37.1 bits (82), Expect = 0.012
Identities = 15/49 (30%), Positives = 28/49 (57%)
Frame = +3
Query: 255 DIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELRVQMA 401
++ + +D +S+GF FV F R DA +A+ MD + G++++ A
Sbjct: 541 EVRVVKDPAKNKSKGFGFVSFVRREDAAKAIAEMDSVTIGGKQVKTNWA 589
>SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42)
Length = 1531
Score = 36.7 bits (81), Expect = 0.016
Identities = 25/73 (34%), Positives = 37/73 (50%)
Frame = +3
Query: 174 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDT 353
+L V N+ TT DL+ FER GEV D+ I + + +AFV+F E A +A
Sbjct: 250 TLFVGNIEKTTTYGDLKEAFERYGEVIDVDIKKQ---PGNNPYAFVQFAELSSAIQARRK 306
Query: 354 MDGRMLDGRELRV 392
MD + ++V
Sbjct: 307 MDREYVGRNRVKV 319
>SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35)
Length = 929
Score = 36.3 bits (80), Expect = 0.021
Identities = 29/85 (34%), Positives = 46/85 (54%)
Frame = +3
Query: 138 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRF 317
YG PP R + S+ V+NL+ RT+ +DL+ F + G+V Y D + ++ G V F
Sbjct: 790 YG-PPVRTN--YSVIVENLSSRTSWQDLKDYFRKYGKV--TY--ADAH-KKRIGEGVVEF 841
Query: 318 FERRDAEEALDTMDGRMLDGRELRV 392
+ D A++ +D L GR +RV
Sbjct: 842 ESKDDLNTAIEKLDDTELGGRRIRV 866
Score = 35.1 bits (77), Expect = 0.050
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +3
Query: 294 RGFAFVRFFERRDAEEALDTMDGRMLDGRELRVQMA 401
RG+ FV F + RDAE+A+ ++GR L G + V+ +
Sbjct: 722 RGYGFVEFDDHRDAEDAVHDLNGRDLIGERVVVEFS 757
>SB_12089| Best HMM Match : RRM_1 (HMM E-Value=7.4e-13)
Length = 260
Score = 35.5 bits (78), Expect = 0.038
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 15/93 (16%)
Frame = +3
Query: 165 GMVSLKVDNLTYRTTPEDLRRVFERCGEVGDI-YIPRDRYTRES--------------RG 299
G L V N+ +R DLR++F G + D+ I +R ++ + G
Sbjct: 66 GPKRLHVTNIPFRFRDNDLRQMFGSFGVIADVEIIYNERGSKHAVRFPTRPNPLNLRIEG 125
Query: 300 FAFVRFFERRDAEEALDTMDGRMLDGRELRVQM 398
F FV F +A +A + ++G ++DGR++ V +
Sbjct: 126 FGFVTFNTAAEANKAREKLNGTIVDGRKVEVSL 158
>SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 34.3 bits (75), Expect = 0.087
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +3
Query: 219 LRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELRV 392
++ +F + G V + + SRGFAFV + +AE+ +GR ++G +RV
Sbjct: 222 IKELFSQTGNVTFAQVAINPANGGSRGFAFVDYATAEEAEKGQRAHNGRQVEGSNIRV 279
>SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 420
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +3
Query: 174 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVR 314
+L VDNL+ T D+ R F G+V ++I DR T +S+G V+
Sbjct: 320 TLFVDNLSEDTKELDVLRYFRPYGQVAKVHILTDRETGKSKGCGVVK 366
Score = 31.9 bits (69), Expect = 0.46
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +3
Query: 177 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVR 314
L V +L + TT ++LR FE+CGE+ I + + R F R
Sbjct: 238 LMVQDLDFDTTVDELREYFEKCGELTGIDLLINSEKRTCAAIVFFR 283
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/58 (34%), Positives = 29/58 (50%)
Frame = +3
Query: 174 SLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEAL 347
S+ V L T E L+ FE+ GEV + I R + SR + FV F + ++E L
Sbjct: 81 SVFVGGLASGTDEEGLKDYFEQFGEVESVRIMR-TFLGYSRNYGFVLFKDDGPSKEVL 137
>SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035)
Length = 258
Score = 33.5 bits (73), Expect = 0.15
Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 1/82 (1%)
Frame = +3
Query: 159 IDGMVSLKVDN-LTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDA 335
++G SL + N T DLR V E + I SRGF FV + D
Sbjct: 37 VEGFYSLVLTNGKVSNTILLDLRLVKEVSLSILARVIMEREQPERSRGFGFVTLENQEDL 96
Query: 336 EEALDTMDGRMLDGRELRVQMA 401
E+ DG +GR L+V A
Sbjct: 97 EDVTRKFDGFEYEGRRLKVAEA 118
>SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 783
Score = 33.1 bits (72), Expect = 0.20
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Frame = +3
Query: 150 PPRIDGMVS--LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFE 323
PP D + L V NL + +DLR FE+ G V D+ I R + +AFV+F +
Sbjct: 228 PPEEDPKATRTLFVGNLETGISCQDLRLSFEKFGVVLDVDIKRPA-RGQGNTYAFVKFAD 286
Query: 324 RRDAEEALDTMDGRMLDGRELRV 392
A +A M G+ + +++
Sbjct: 287 LDVAAKAKCAMQGQCIGRNHIKI 309
>SB_16504| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 252
Score = 32.7 bits (71), Expect = 0.26
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 294 RGFAFVRFFERRDAEEALDTMDGRMLDGRELRVQM 398
RG+AF+ + RD A DG+ +DGR + V +
Sbjct: 47 RGYAFIEYEHERDMHAAYKHADGKKIDGRRIVVDV 81
>SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19)
Length = 168
Score = 32.3 bits (70), Expect = 0.35
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Frame = +3
Query: 138 YGRPPPRIDGMVSLKVDNLTYRTTPEDLRR-----VFERCGEVGDIYIPRDRYTRESRGF 302
YG PPP D + + + P DL VFE G + ++ + D + ++RG+
Sbjct: 59 YG-PPPGWDRPIPPRGCEVFVGKIPRDLYEDELVPVFETAGPIYEVRLMMD-FNGQNRGY 116
Query: 303 AFVRFFERRDAEEALDTMD 359
AFV + + DA+ + T++
Sbjct: 117 AFVVYTSKDDAKRCVKTLN 135
>SB_24938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 550
Score = 32.3 bits (70), Expect = 0.35
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 5/95 (5%)
Frame = +3
Query: 123 LLKMSYGRP---PPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDI-YIPRDRYTRE 290
LLK + P P + +L V L + T +DLR F + GE+ I +PR
Sbjct: 285 LLKQAQSMPMLDTPTDRSITTLYVGGLEGKVTEQDLRDHFYQFGELRSISMVPR------ 338
Query: 291 SRGFAFVRFFERRDAEEALD-TMDGRMLDGRELRV 392
+ AFV F R AE A D + + +L GR L++
Sbjct: 339 -QNCAFVCFTSRAAAEAAADRSFNKLILKGRRLKI 372
>SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 347
Score = 31.9 bits (69), Expect = 0.46
Identities = 17/60 (28%), Positives = 30/60 (50%)
Frame = +3
Query: 219 LRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELRVQM 398
L + F+ G V + D+ T S+ F FV + A+ A+ M+G + + L+VQ+
Sbjct: 278 LMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVMSAQNAIQHMNGFQIGAKRLKVQL 337
>SB_37827| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 628
Score = 31.9 bits (69), Expect = 0.46
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +3
Query: 243 GEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELRVQ 395
G + ++ IP D+ T + R F FV F A + +DG L R + V+
Sbjct: 481 GPLENVRIPTDKNTGQQRSFGFVEFSSPVSVHYASELLDGIRLYDRAINVK 531
>SB_39934| Best HMM Match : RRM_1 (HMM E-Value=6.5e-24)
Length = 343
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 231 FERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEAL 347
F GE+ +YIP + T+E +G V F +A E +
Sbjct: 141 FSSSGEIASVYIPENLKTKERKGHCIVTFASVTEAFEVV 179
>SB_47564| Best HMM Match : RRM_1 (HMM E-Value=0.23)
Length = 44
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/40 (30%), Positives = 25/40 (62%)
Frame = +3
Query: 243 GEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDG 362
GE+ ++ + RD+ T + +GF F+ + ++R A+D +G
Sbjct: 3 GEIVNVNLVRDKKTGKQKGFCFLCYEDQRSTILAVDNFNG 42
>SB_42066| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 240
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Frame = +3
Query: 171 VSLKVDNLTYR--TTPEDLRRVFERCGEVGDI-YIPRDR 278
+S+K +N R T E+L +FE CG+V D ++P+DR
Sbjct: 147 LSVKYNNDKTRESVTEEELTSMFEDCGDVADFRFLPKDR 185
>SB_57661| Best HMM Match : RRM_1 (HMM E-Value=0.017)
Length = 255
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +3
Query: 141 GRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRG--FAFVR 314
G R V L V + +DLR +FE G++ ++ I +D+YT + + FV
Sbjct: 160 GTTSVRDSNSVKLFVGQVPRTWEEKDLRPIFEPYGQIYELTILKDKYTGQHKDDRKLFVG 219
Query: 315 FFERRDAEEALDTM 356
+ EE L M
Sbjct: 220 MISKHAKEEDLRVM 233
>SB_46575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 241
Score = 30.3 bits (65), Expect = 1.4
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Frame = +3
Query: 174 SLKVDNLTYRTTPEDLRR----VFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEE 341
++ + NL + E+L++ +F + G + DI + T + RG AFV F + A
Sbjct: 8 TIYIKNLNEKIKKEELKKSLYAIFSQFGPILDIVALK---TLKMRGQAFVVFKDIGSATN 64
Query: 342 ALDTMDGRMLDGRELRVQMA 401
AL +M G + +R+Q A
Sbjct: 65 ALRSMQGFPFYDKPMRIQYA 84
>SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1291
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/63 (23%), Positives = 32/63 (50%)
Frame = +3
Query: 213 EDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGRELRV 392
+ ++ + GE+ + +D T S+G+AF + + + A+ ++G L ++L V
Sbjct: 687 DQVKELLSSFGELRAFNLVKDSATGLSKGYAFCEYVDLGITDVAIQGLNGMQLGDKKLIV 746
Query: 393 QMA 401
Q A
Sbjct: 747 QRA 749
>SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0)
Length = 672
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +3
Query: 189 NLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMD 359
+L T E L R F + I RD+ + +S+G+ FV F + D +A+ M+
Sbjct: 223 DLGSEVTDESLTRAFAKYTSFLKAKIVRDKKSNKSKGYGFVSFKDPNDFIKAMREMN 279
>SB_30739| Best HMM Match : Keratin_B2 (HMM E-Value=0.87)
Length = 231
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/44 (43%), Positives = 24/44 (54%)
Frame = -2
Query: 558 GNVPWNSLSQSESDCANGCGYDCASNYDGGNETWTCACDRNDSC 427
GN +L+ +S NGC D S+ DG NE+ T A D DSC
Sbjct: 19 GNNESGTLADDDSCHENGC-CDAESSDDGNNESGTLADD--DSC 59
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/44 (43%), Positives = 24/44 (54%)
Frame = -2
Query: 558 GNVPWNSLSQSESDCANGCGYDCASNYDGGNETWTCACDRNDSC 427
GN +L+ +S NGC D S+ DG NE+ T A D DSC
Sbjct: 100 GNNESGTLADDDSCHENGC-CDAESSDDGNNESGTLADD--DSC 140
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/44 (43%), Positives = 24/44 (54%)
Frame = -2
Query: 558 GNVPWNSLSQSESDCANGCGYDCASNYDGGNETWTCACDRNDSC 427
GN +L+ +S NGC D S+ DG NE+ T A D DSC
Sbjct: 127 GNNESGTLADDDSCHENGC-CDAESSDDGNNESGTLADD--DSC 167
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/44 (43%), Positives = 24/44 (54%)
Frame = -2
Query: 558 GNVPWNSLSQSESDCANGCGYDCASNYDGGNETWTCACDRNDSC 427
GN +L+ +S NGC D S+ DG NE+ T A D DSC
Sbjct: 154 GNNESGTLADDDSCHENGC-CDAESSDDGNNESGTLADD--DSC 194
Score = 28.7 bits (61), Expect = 4.3
Identities = 19/44 (43%), Positives = 23/44 (52%)
Frame = -2
Query: 558 GNVPWNSLSQSESDCANGCGYDCASNYDGGNETWTCACDRNDSC 427
GN L+ +S NGC D S+ DG NE+ T A D DSC
Sbjct: 73 GNNESGILADDDSCHENGC-CDAESSDDGNNESGTLADD--DSC 113
>SB_38878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 436
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 3/57 (5%)
Frame = -2
Query: 534 SQSESDCANGCGYDCASNYDGGNETWTCACD---RNDSCMAMRGDHIAPSEREVPCR 373
++ E + G + YDG T D ND + M G H AP R++ C+
Sbjct: 314 AKEELSKSRGKSHPFDEQYDGDRNTQIALMDMPHENDVVVEMNGRHAAPRHRKIRCQ 370
>SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15)
Length = 876
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +3
Query: 183 VDNL-TYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMD 359
+ NL T + +DL +F R G+V + + F FV+F + A+EA+
Sbjct: 50 IGNLATDKIARQDLEEIFSRHGKVLGCSLHAN--------FGFVQFETEKGADEAVAKEH 101
Query: 360 GRMLDGRELRVQM 398
GR+++G+++ V++
Sbjct: 102 GRIINGKKIDVRI 114
>SB_46333| Best HMM Match : EGF (HMM E-Value=1.10001e-40)
Length = 580
Score = 29.1 bits (62), Expect = 3.3
Identities = 21/64 (32%), Positives = 25/64 (39%)
Frame = -2
Query: 600 HFSVWIVSENDCVSGNVPWNSLSQSESDCANGCGYDCASNYDGGNETWTCACDRNDSCMA 421
H W VS N+ W + + CA G CAS +G C CD ND M
Sbjct: 485 HGYAWWVSRNNAKM--TYWGGATPGSNKCACGMTSSCASPSNG------CNCDSND--MT 534
Query: 420 MRGD 409
R D
Sbjct: 535 WRSD 538
>SB_41292| Best HMM Match : RRM_1 (HMM E-Value=0.0085)
Length = 292
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/35 (37%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Frame = +3
Query: 300 FAFVRFFERRDAEEALDTMDGR-MLDGRELRVQMA 401
+AFV+F+ + A A + ++G+ ++DG L+VQ A
Sbjct: 80 YAFVKFYSAKAALRAKEEVNGKWLIDGNILKVQFA 114
>SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07)
Length = 694
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/38 (44%), Positives = 20/38 (52%)
Frame = +3
Query: 177 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRE 290
L V L+ TT DLR VFE+ G V I I D +E
Sbjct: 183 LGVFGLSLYTTERDLRPVFEKYGPVEAIQIVYDHQAKE 220
>SB_14150| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 429
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 507 GCGYDCASNYDGGNETWTCACDRNDSC 427
GCGY C NY GN CD N C
Sbjct: 174 GCGYGCDGNYGCGN-----GCDGNYGC 195
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 5/36 (13%)
Frame = -2
Query: 519 DCANGCGYDCASNYD-----GGNETWTCACDRNDSC 427
D + GCGY C NY GN + CD N C
Sbjct: 130 DDSYGCGYGCDGNYGCGYGCDGNYGYGYGCDGNYGC 165
>SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0)
Length = 960
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/54 (29%), Positives = 22/54 (40%), Gaps = 2/54 (3%)
Frame = -2
Query: 567 CVSG--NVPWNSLSQSESDCANGCGYDCASNYDGGNETWTCACDRNDSCMAMRG 412
CV+G N S + + N C C + G N C C N +C A+ G
Sbjct: 632 CVNGSCNATDGSCNCAAGYHGNACDRPCPAGKHGANCGLKCLCANNGTCNAITG 685
>SB_34470| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 28.7 bits (61), Expect = 4.3
Identities = 22/72 (30%), Positives = 32/72 (44%)
Frame = +3
Query: 177 LKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTM 356
L V+NL+ R +DL+ + GEV +DR G F D AL +
Sbjct: 345 LIVENLSTRAGWQDLKDYMRQAGEVTFTQCHKDRV-----GEGVCDFSNESDMLYALKKL 399
Query: 357 DGRMLDGRELRV 392
DG L G+ +R+
Sbjct: 400 DGTELFGKRIRL 411
>SB_43550| Best HMM Match : Laminin_EGF (HMM E-Value=0)
Length = 1182
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/72 (25%), Positives = 27/72 (37%), Gaps = 1/72 (1%)
Frame = -2
Query: 561 SGNVPWNSLSQSESDCANGCGYDCASNYDGGNETWTCACDRNDSCMAMRGDHIA-PSERE 385
S N N++ Q +D + YDGGN TC CD + G + P +
Sbjct: 195 SSNGNNNNVDQDNNDDETITTTTNKNKYDGGNNDDTCNCDPKGTQRDANGTLVCDPIGGQ 254
Query: 384 VPCRPTFVRPSC 349
C+ + C
Sbjct: 255 CKCKSNVIGQRC 266
>SB_38456| Best HMM Match : BTB (HMM E-Value=8.8e-26)
Length = 1410
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = -2
Query: 549 PWNSLSQSESDCANGCGYDCASNYDGGNETWTCACDRNDSC 427
P + L S C +GC +C+ N +G + + C+C C
Sbjct: 1346 PSSLLELSTCGCKSGCQRNCSFNNNGLSCSEACSCIAGTDC 1386
>SB_43406| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 576
Score = 27.9 bits (59), Expect = 7.5
Identities = 21/65 (32%), Positives = 32/65 (49%)
Frame = +3
Query: 207 TPEDLRRVFERCGEVGDIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGRMLDGREL 386
T E L+ F G V + ++R S+GF V F A++A+D M+G + +
Sbjct: 120 TEEILKEEFNHLGHVERVNFEKNR----SQGF--VTFDTWEAADKAIDEMNGLKVQHVHI 173
Query: 387 RVQMA 401
RV MA
Sbjct: 174 RVSMA 178
>SB_20454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 693
Score = 27.9 bits (59), Expect = 7.5
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +3
Query: 126 LKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIPRDRYTRESRG 299
LK + GR P D + + D+ + DLR RCG +P D+ R ++G
Sbjct: 485 LKQTGGRIPENKDSLGRDRRDSCGTKEL-RDLRDAIRRCGVTDSPTVPDDKGKRNAKG 541
>SB_13504| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4924
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +3
Query: 126 LKMSYGRPPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCG 245
+K+S+ R P+I S V T TTPE+LR++ E G
Sbjct: 1522 MKLSF-RTGPQIGRTKSGFVATYTSGTTPEELRKISENAG 1560
>SB_48031| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = -2
Query: 573 NDCVSGNVPWNSLSQSESDCANGCGYDCASN--YDGGNETWTCACDRNDSCMAMRGD 409
N+ +G+ N+ S ESDC N D SN +G ++ + +DS A GD
Sbjct: 18 NNTSNGDSDSNNASNGESDCNNASNGDSDSNNASNGDRDSNNASNGDSDSNNASNGD 74
>SB_21838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 949
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Frame = +3
Query: 255 DIYIPRDRYTRESRGFAFVRFFERRDAEEALDTMDGR----MLDGR 380
DI + +D+ T SRGF FV +A + L+ + M+DGR
Sbjct: 438 DIRLIKDKVTGTSRGFCFVELATIEEATQLLELIAAMNPPFMIDGR 483
>SB_6097| Best HMM Match : Chitin_bind_3 (HMM E-Value=0.7)
Length = 325
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +1
Query: 235 KGAEKLVISTFPEIGTQGKVEDSPS*GFSSVVTLKKP*TR-WTDECWTAGNFAFRWRD 405
K A +++ P I G + P+ + + K P R WT G F ++WR+
Sbjct: 4 KLAFAVLLCVIPHISGHGYLSIPPARNYCGALKDKGPCVRNWTPNELNCGGFVYQWRE 61
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,180,574
Number of Sequences: 59808
Number of extensions: 343099
Number of successful extensions: 988
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 985
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1645141000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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