Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11e19
         (649 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           28   0.29 
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    26   1.2  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            25   1.6  
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    23   6.3  

>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 27.9 bits (59), Expect = 0.29
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = -2

Query: 411 DHIA--PSEREVPCRPTFVRPSCLGLLQRHDARKTSRRRIL 295
           DH++  P  REV  R   +  +   LL+ H   KTS+ R+L
Sbjct: 806 DHLSWLPHVREVTTRARKIADAVTRLLRNHSGPKTSKARLL 846


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
 Frame = -2

Query: 519 DCANGCGYDCASNYDGGN--ETWTCACDRNDSCMAMRGDHI 403
           D  + C      N  GG   +   C C  N +CM M GD +
Sbjct: 752 DTCDQCAKGYYGNALGGTPYDCKRCPCPNNGACMQMAGDTV 792


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +3

Query: 147 PPPRIDGMVSLKVDNLTYRTTPEDLRRVFERCGEVGDIYIP 269
           PPP+   +  + +  L  + T E    V ++C E G I+ P
Sbjct: 756 PPPKPPTVTMMDMQQLDTQPTLEFKELVSQKCAERGIIFAP 796


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +2

Query: 131 NELRKTSATNRWHGLV 178
           N L  T+ATNR+ GLV
Sbjct: 426 NGLHSTTATNRFSGLV 441


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 574,209
Number of Sequences: 2352
Number of extensions: 11501
Number of successful extensions: 26
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)