Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11e15
(741 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1 ... 26 0.37
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.64
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.64
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.64
X72339-1|CAA51066.1| 133|Tribolium castaneum abdominal protein. 24 1.5
AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax pr... 24 1.5
AF146649-1|AAD38009.1| 96|Tribolium castaneum ultrathorax prot... 24 1.5
AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A prot... 24 1.5
AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII pr... 24 1.5
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 23 2.6
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 23 3.4
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 23 3.4
EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetyla... 22 4.5
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 22 4.5
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 22 4.5
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 22 4.5
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 22 4.5
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 22 4.5
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 22 4.5
AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax pr... 22 4.5
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 22 4.5
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 22 4.5
AJ850291-1|CAH64511.1| 533|Tribolium castaneum putative esteras... 22 6.0
AJ850290-1|CAH64510.1| 533|Tribolium castaneum putative esteras... 22 6.0
AJ850289-1|CAH64509.1| 533|Tribolium castaneum putative esteras... 22 6.0
AJ850288-1|CAH64508.1| 510|Tribolium castaneum putative esteras... 22 6.0
AJ850287-1|CAH64507.1| 509|Tribolium castaneum putative esteras... 22 6.0
>AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1
protein protein.
Length = 371
Score = 25.8 bits (54), Expect = 0.37
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = +1
Query: 553 RRVWCRTVCRAGRSSGCVRSLQEQRACPSATAAPAYEPRRRHATTGVP 696
RR CR + ++ R+ ++ A+PA PR TG+P
Sbjct: 178 RRAKCRQQLQQQQNKSASRTTTSPTKVKASKASPAAAPRSVATPTGIP 225
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 25.0 bits (52), Expect = 0.64
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -1
Query: 474 LVPEGHSCVHVPPGQTKS 421
+V G SC++VPPG KS
Sbjct: 109 VVKHGGSCLYVPPGIFKS 126
Score = 22.2 bits (45), Expect = 4.5
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -3
Query: 478 LPGSRGTLVCACAARP 431
+PG + T+V AC P
Sbjct: 182 MPGKKNTIVYACCPEP 197
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 25.0 bits (52), Expect = 0.64
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -1
Query: 474 LVPEGHSCVHVPPGQTKS 421
+V G SC++VPPG KS
Sbjct: 109 VVKHGGSCLYVPPGIFKS 126
Score = 22.2 bits (45), Expect = 4.5
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -3
Query: 478 LPGSRGTLVCACAARP 431
+PG + T+V AC P
Sbjct: 182 MPGKKNTIVYACCPEP 197
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 25.0 bits (52), Expect = 0.64
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -1
Query: 474 LVPEGHSCVHVPPGQTKS 421
+V G SC++VPPG KS
Sbjct: 109 VVKHGGSCLYVPPGIFKS 126
Score = 22.2 bits (45), Expect = 4.5
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -3
Query: 478 LPGSRGTLVCACAARP 431
+PG + T+V AC P
Sbjct: 182 MPGKKNTIVYACCPEP 197
>X72339-1|CAA51066.1| 133|Tribolium castaneum abdominal protein.
Length = 133
Score = 23.8 bits (49), Expect = 1.5
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -3
Query: 385 HALCAASCVVELWRRVRRWKL 323
HALC +++W + RR KL
Sbjct: 41 HALCLTERQIKIWFQNRRMKL 61
>AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax
protein.
Length = 314
Score = 23.8 bits (49), Expect = 1.5
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -3
Query: 385 HALCAASCVVELWRRVRRWKL 323
HALC +++W + RR KL
Sbjct: 258 HALCLTERQIKIWFQNRRMKL 278
>AF146649-1|AAD38009.1| 96|Tribolium castaneum ultrathorax
protein.
Length = 96
Score = 23.8 bits (49), Expect = 1.5
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -3
Query: 385 HALCAASCVVELWRRVRRWKL 323
HALC +++W + RR KL
Sbjct: 40 HALCLTERQIKIWFQNRRMKL 60
>AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A
protein.
Length = 284
Score = 23.8 bits (49), Expect = 1.5
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -3
Query: 385 HALCAASCVVELWRRVRRWKL 323
HALC +++W + RR KL
Sbjct: 192 HALCLTERQIKIWFQNRRMKL 212
>AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII
protein.
Length = 343
Score = 23.8 bits (49), Expect = 1.5
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -3
Query: 385 HALCAASCVVELWRRVRRWKL 323
HALC +++W + RR KL
Sbjct: 251 HALCLTERQIKIWFQNRRMKL 271
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 23.0 bits (47), Expect = 2.6
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = -2
Query: 623 CSCNERTQPLLRPARHTVRHHTRLRPAAHYKRDQD 519
C C E PLLR +R + + P RD D
Sbjct: 2174 CGCEE--YPLLRTINRVLRGYAKPDPKCILGRDND 2206
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 22.6 bits (46), Expect = 3.4
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 474 LVPEGHSCVHVPPGQTKS 421
+V SC++VPPG KS
Sbjct: 109 VVKHNGSCLYVPPGIFKS 126
Score = 22.2 bits (45), Expect = 4.5
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -3
Query: 478 LPGSRGTLVCACAARP 431
+PG + T+V AC P
Sbjct: 182 MPGKKNTIVYACCPEP 197
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 22.6 bits (46), Expect = 3.4
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 474 LVPEGHSCVHVPPGQTKS 421
+V SC++VPPG KS
Sbjct: 109 VVKHNGSCLYVPPGIFKS 126
Score = 22.2 bits (45), Expect = 4.5
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = -3
Query: 478 LPGSRGTLVCACAARP 431
+PG + T+V AC P
Sbjct: 182 MPGKKNTIVYACCPEP 197
>EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetylase
1 protein.
Length = 534
Score = 22.2 bits (45), Expect = 4.5
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -1
Query: 114 WSVTILAQHNILSHV*KSEIVDGARARRTLIEA 16
W ILA HN + V ++++ + RT+ E+
Sbjct: 442 WVDEILANHNDVYFVTMTQVIQWIQNPRTITES 474
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.2 bits (45), Expect = 4.5
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3
Query: 385 HALCAASCVVELWRRVRRWK 326
HALC +++W + RR K
Sbjct: 255 HALCLTERQIKIWFQNRRMK 274
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.2 bits (45), Expect = 4.5
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3
Query: 385 HALCAASCVVELWRRVRRWK 326
HALC +++W + RR K
Sbjct: 255 HALCLTERQIKIWFQNRRMK 274
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 22.2 bits (45), Expect = 4.5
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3
Query: 385 HALCAASCVVELWRRVRRWK 326
HALC +++W + RR K
Sbjct: 277 HALCLTERQIKIWFQNRRMK 296
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 22.2 bits (45), Expect = 4.5
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3
Query: 385 HALCAASCVVELWRRVRRWK 326
HALC +++W + RR K
Sbjct: 255 HALCLTERQIKIWFQNRRMK 274
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 22.2 bits (45), Expect = 4.5
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3
Query: 385 HALCAASCVVELWRRVRRWK 326
HALC +++W + RR K
Sbjct: 211 HALCLTERQIKIWFQNRRMK 230
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 22.2 bits (45), Expect = 4.5
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3
Query: 385 HALCAASCVVELWRRVRRWK 326
HALC +++W + RR K
Sbjct: 255 HALCLTERQIKIWFQNRRMK 274
>AF264695-1|AAG13009.1| 100|Tribolium castaneum cephalothorax
protein.
Length = 100
Score = 22.2 bits (45), Expect = 4.5
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3
Query: 385 HALCAASCVVELWRRVRRWK 326
HALC +++W + RR K
Sbjct: 43 HALCLTERQIKIWFQNRRMK 62
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 22.2 bits (45), Expect = 4.5
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3
Query: 385 HALCAASCVVELWRRVRRWK 326
HALC +++W + RR K
Sbjct: 279 HALCLTERQIKIWFQNRRMK 298
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 22.2 bits (45), Expect = 4.5
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3
Query: 385 HALCAASCVVELWRRVRRWK 326
HALC +++W + RR K
Sbjct: 255 HALCLTERQIKIWFQNRRMK 274
>AJ850291-1|CAH64511.1| 533|Tribolium castaneum putative esterase
protein.
Length = 533
Score = 21.8 bits (44), Expect = 6.0
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -3
Query: 382 ALCAASCVVELWRRVRRW 329
A+ + C + LW R RR+
Sbjct: 214 AILQSGCALNLWARSRRY 231
>AJ850290-1|CAH64510.1| 533|Tribolium castaneum putative esterase
protein.
Length = 533
Score = 21.8 bits (44), Expect = 6.0
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -3
Query: 382 ALCAASCVVELWRRVRRW 329
A+ + C + LW R RR+
Sbjct: 214 AILQSGCALNLWARSRRY 231
>AJ850289-1|CAH64509.1| 533|Tribolium castaneum putative esterase
protein.
Length = 533
Score = 21.8 bits (44), Expect = 6.0
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -3
Query: 382 ALCAASCVVELWRRVRRW 329
A+ + C + LW R RR+
Sbjct: 214 AILQSGCALNLWARSRRY 231
>AJ850288-1|CAH64508.1| 510|Tribolium castaneum putative esterase
protein.
Length = 510
Score = 21.8 bits (44), Expect = 6.0
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -3
Query: 382 ALCAASCVVELWRRVRRW 329
A+ + C + LW R RR+
Sbjct: 214 AILQSGCALNLWARSRRY 231
>AJ850287-1|CAH64507.1| 509|Tribolium castaneum putative esterase
protein.
Length = 509
Score = 21.8 bits (44), Expect = 6.0
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -3
Query: 382 ALCAASCVVELWRRVRRW 329
A+ + C + LW R RR+
Sbjct: 213 AILQSGCALNLWARSRRY 230
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,845
Number of Sequences: 336
Number of extensions: 3001
Number of successful extensions: 33
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -