Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11e15
(741 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee homeobox-... 24 1.7
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 4.0
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 4.0
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 4.0
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 4.0
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 23 4.0
M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee homeobox-... 22 5.3
M29488-1|AAA27723.1| 86|Apis mellifera protein ( Bee homeobox-... 22 5.3
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.3
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.3
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.3
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 22 5.3
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 22 5.3
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 22 7.0
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 21 9.2
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 21 9.2
>M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H15. ).
Length = 74
Score = 23.8 bits (49), Expect = 1.7
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -3
Query: 385 HALCAASCVVELWRRVRRWKL 323
HALC +++W + RR KL
Sbjct: 43 HALCLTERQIKIWFQNRRMKL 63
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 474 LVPEGHSCVHVPPGQTKS 421
+V SC++VPPG KS
Sbjct: 92 VVTHNGSCLYVPPGIFKS 109
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 4.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 474 LVPEGHSCVHVPPGQTKS 421
+V SC++VPPG KS
Sbjct: 160 VVTHNGSCLYVPPGIFKS 177
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 4.0
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 474 LVPEGHSCVHVPPGQTKS 421
+V SC++VPPG KS
Sbjct: 160 VVTHNGSCLYVPPGIFKS 177
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 22.6 bits (46), Expect = 4.0
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +1
Query: 646 AAPAYEPRRRHATTGVPQ 699
+ P E RR+H GVP+
Sbjct: 1065 SGPMSEERRQHTAEGVPE 1082
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 22.6 bits (46), Expect = 4.0
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = -3
Query: 247 IMGLHKIRTPFTSPVSHKCYLTSHVLIPHC*DYRIT 140
I L K+++P ++ K +H+L H DY ++
Sbjct: 740 IQSLMKLKSPEWKDLAKKARSVNHLLTHHEYDYELS 775
>M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H90. ).
Length = 74
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3
Query: 385 HALCAASCVVELWRRVRRWK 326
HALC +++W + RR K
Sbjct: 43 HALCLTERQIKIWFQNRRMK 62
>M29488-1|AAA27723.1| 86|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H55. ).
Length = 86
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3
Query: 385 HALCAASCVVELWRRVRRWK 326
HALC +++W + RR K
Sbjct: 43 HALCLTERQIKIWFQNRRMK 62
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 22.2 bits (45), Expect = 5.3
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 474 LVPEGHSCVHVPPGQTKS 421
+V SC++VPPG KS
Sbjct: 92 VVTHDGSCLYVPPGIFKS 109
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 22.2 bits (45), Expect = 5.3
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 474 LVPEGHSCVHVPPGQTKS 421
+V SC++VPPG KS
Sbjct: 92 VVTHDGSCLYVPPGIFKS 109
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 22.2 bits (45), Expect = 5.3
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 474 LVPEGHSCVHVPPGQTKS 421
+V SC++VPPG KS
Sbjct: 92 VVTHDGSCLYVPPGIFKS 109
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 22.2 bits (45), Expect = 5.3
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -1
Query: 474 LVPEGHSCVHVPPGQTKS 421
+V SC++VPPG KS
Sbjct: 92 VVTHDGSCLYVPPGIFKS 109
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 22.2 bits (45), Expect = 5.3
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3
Query: 385 HALCAASCVVELWRRVRRWK 326
HALC +++W + RR K
Sbjct: 305 HALCLTERQIKIWFQNRRMK 324
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 21.8 bits (44), Expect = 7.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 168 IKTCDVK*HLCDTGEVNGVRILCKP 242
I CD + + D+G +N VR +C P
Sbjct: 127 IDMCD-RLWVLDSGLINNVRSVCPP 150
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.4 bits (43), Expect = 9.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -1
Query: 474 LVPEGHSCVHVPPGQTKS 421
+V +C++VPPG KS
Sbjct: 129 VVKNNGTCLYVPPGIFKS 146
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 21.4 bits (43), Expect = 9.2
Identities = 5/14 (35%), Positives = 11/14 (78%)
Frame = +3
Query: 201 DTGEVNGVRILCKP 242
D+G +N ++++C P
Sbjct: 143 DSGLINNIQLMCSP 156
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 184,766
Number of Sequences: 438
Number of extensions: 3486
Number of successful extensions: 19
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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