Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11e14
         (550 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5LKH1 Cluster: Putative uncharacterized protein; n=1; ...    33   3.3  
UniRef50_O77406 Cluster: TAP1 protein; n=2; Tetrahymena thermoph...    33   4.4  
UniRef50_Q9P898 Cluster: AMI1 protein; n=1; Podospora anserina|R...    33   4.4  
UniRef50_A7QV31 Cluster: Chromosome undetermined scaffold_184, w...    33   5.8  
UniRef50_Q4Y0V3 Cluster: Putative uncharacterized protein; n=3; ...    33   5.8  
UniRef50_A5DCB4 Cluster: Putative uncharacterized protein; n=1; ...    33   5.8  
UniRef50_Q7RFC9 Cluster: Ribosome releasing factor-related; n=6;...    32   7.6  
UniRef50_Q5AJS6 Cluster: Multiple RNA-binding domain-containing ...    32   7.6  

>UniRef50_Q5LKH1 Cluster: Putative uncharacterized protein; n=1;
           Silicibacter pomeroyi|Rep: Putative uncharacterized
           protein - Silicibacter pomeroyi
          Length = 642

 Score = 33.5 bits (73), Expect = 3.3
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +2

Query: 251 DQVEHGDDGIAAEGAENADESTEGDQNQENPDG 349
           D+ + GD+G   + ++N DE  EGD+  E  DG
Sbjct: 326 DEDDEGDEGDEGDESQNGDEGDEGDEGDELNDG 358


>UniRef50_O77406 Cluster: TAP1 protein; n=2; Tetrahymena
           thermophila|Rep: TAP1 protein - Tetrahymena thermophila
          Length = 334

 Score = 33.1 bits (72), Expect = 4.4
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +2

Query: 251 DQVEHGDDGIAAEGAENADESTEGDQNQENPDG 349
           D  E GDD    + AE+ D++ +GD N++  DG
Sbjct: 248 DDNEDGDDAEDGDDAEDGDDAEDGDDNEDAEDG 280



 Score = 32.7 bits (71), Expect = 5.8
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +2

Query: 251 DQVEHGDDGIAAEGAENADESTEGDQNQENPD 346
           D  E GDD    + AE+ D++ +GD N++  D
Sbjct: 281 DDAEDGDDAEDGDDAEDGDDNEDGDDNEDGDD 312


>UniRef50_Q9P898 Cluster: AMI1 protein; n=1; Podospora anserina|Rep:
           AMI1 protein - Podospora anserina
          Length = 1882

 Score = 33.1 bits (72), Expect = 4.4
 Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
 Frame = +3

Query: 141 KRKVAELKLRQL-NPSPLKMSLKKQKFQNKPKRTMAYRIKLSMETTESLLKALRTLMSL 314
           +R V+  K   L  PSP K S+  +K +N+P  +  + I+ + E + SL+  +R L +L
Sbjct: 152 RRSVSPSKFETLATPSPTKFSVPNRKLRNQP-ASRIHDIEFAAEISTSLIAQVRNLQAL 209


>UniRef50_A7QV31 Cluster: Chromosome undetermined scaffold_184,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome undetermined scaffold_184, whole genome
           shotgun sequence - Vitis vinifera (Grape)
          Length = 262

 Score = 32.7 bits (71), Expect = 5.8
 Identities = 12/55 (21%), Positives = 31/55 (56%)
 Frame = +3

Query: 180 PSPLKMSLKKQKFQNKPKRTMAYRIKLSMETTESLLKALRTLMSLRRVIRIKKIL 344
           P  L  S  K + QN P    ++  + ++  T  +  A++++  +R+++R+K+++
Sbjct: 66  PLFLSPSTLKDQNQNHPSLVSSFAFRRALSATSPMASAVKSVEKIRQIVRLKQVM 120


>UniRef50_Q4Y0V3 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 896

 Score = 32.7 bits (71), Expect = 5.8
 Identities = 18/65 (27%), Positives = 33/65 (50%)
 Frame = +3

Query: 108 SEYHTSSSW*PKRKVAELKLRQLNPSPLKMSLKKQKFQNKPKRTMAYRIKLSMETTESLL 287
           SE   S +  PK KV +LK + L+P    +S   ++ + KPK       +  ++ +  L+
Sbjct: 21  SEELKSKAMKPKLKVPDLKFKSLSPKSKNLSPMIKRLKTKPKLMDTKETETKLKKSLPLI 80

Query: 288 KALRT 302
           K++ T
Sbjct: 81  KSVET 85


>UniRef50_A5DCB4 Cluster: Putative uncharacterized protein; n=1;
           Pichia guilliermondii|Rep: Putative uncharacterized
           protein - Pichia guilliermondii (Yeast) (Candida
           guilliermondii)
          Length = 634

 Score = 32.7 bits (71), Expect = 5.8
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +2

Query: 251 DQVEHGDDGIAAEGAENADESTEGDQNQENPDG 349
           ++VE G++G   E  E  DE+ EG+ N++  +G
Sbjct: 79  EEVEEGEEGEEIEEGEEGDENDEGEGNEQGEEG 111


>UniRef50_Q7RFC9 Cluster: Ribosome releasing factor-related; n=6;
           Plasmodium (Vinckeia)|Rep: Ribosome releasing
           factor-related - Plasmodium yoelii yoelii
          Length = 413

 Score = 32.3 bits (70), Expect = 7.6
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +2

Query: 236 NNGVSDQVEHGDDGIAAEGAENADESTEGDQNQE 337
           NN   DQVE+GD+    E  E+ +E    D+N+E
Sbjct: 197 NNSTHDQVENGDEDEDGEENEDENEDENEDENEE 230


>UniRef50_Q5AJS6 Cluster: Multiple RNA-binding domain-containing
           protein 1; n=4; Saccharomycetales|Rep: Multiple
           RNA-binding domain-containing protein 1 - Candida
           albicans (Yeast)
          Length = 841

 Score = 32.3 bits (70), Expect = 7.6
 Identities = 15/33 (45%), Positives = 22/33 (66%)
 Frame = +2

Query: 395 KLLVENLPSSYLFDYQEKLKELFSKHGEINTVK 493
           +L+V+ LP  Y    +EKL+E FSK G++  VK
Sbjct: 3   RLIVKGLPKYYT---EEKLREFFSKQGDVTDVK 32


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 417,024,266
Number of Sequences: 1657284
Number of extensions: 6338061
Number of successful extensions: 20591
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 19289
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20530
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 35822246242
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)