Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11e14
(550 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_38551| Best HMM Match : Peptidase_S8 (HMM E-Value=0) 31 0.82
SB_583| Best HMM Match : Collagen (HMM E-Value=0.0088) 29 2.5
SB_59669| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_40775| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_4762| Best HMM Match : tRNA-synt_1b (HMM E-Value=0.00013) 29 3.3
SB_49232| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.4
SB_50981| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_16366| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_39733| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_9336| Best HMM Match : Taeniidae_ag (HMM E-Value=0.9) 28 5.8
SB_56601| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_42866| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_2820| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
>SB_38551| Best HMM Match : Peptidase_S8 (HMM E-Value=0)
Length = 1357
Score = 30.7 bits (66), Expect = 0.82
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 251 DQVEHGDDGIAAEGAENADESTEGDQNQENPDG 349
D+VE GDDG + + D EGD E DG
Sbjct: 814 DKVE-GDDGDEGDDGDEGDNGDEGDDGDEGDDG 845
Score = 27.5 bits (58), Expect = 7.6
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +2
Query: 251 DQVEHGDDGIAAEGAENADESTEGDQNQENPD 346
D + GDDG + + D+ EGD + D
Sbjct: 819 DDGDEGDDGDEGDNGDEGDDGDEGDDGSTSDD 850
>SB_583| Best HMM Match : Collagen (HMM E-Value=0.0088)
Length = 69
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 251 DQVEHGDDGIAAEGAENADESTEGDQNQENPDG 349
D + GDDG + E+ D+ +GD + DG
Sbjct: 26 DDGDDGDDGDDGDDGEDDDDGEDGDDGDDGDDG 58
Score = 29.1 bits (62), Expect = 2.5
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 251 DQVEHGDDGIAAEGAENADESTEGDQNQENPDG 349
D + GDDG + E+ D+ +GD + DG
Sbjct: 32 DDGDDGDDGEDDDDGEDGDDGDDGDDGDDGDDG 64
Score = 27.5 bits (58), Expect = 7.6
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +2
Query: 251 DQVEHGDDGIAAEGAENADESTEGDQNQENPDG 349
D + GDDG E ++ ++ +GD + DG
Sbjct: 29 DDGDDGDDGDDGEDDDDGEDGDDGDDGDDGDDG 61
>SB_59669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3511
Score = 28.7 bits (61), Expect = 3.3
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = +3
Query: 96 WHFLSEYHTSSSW*PKRKVAELKLRQLNPSP-LKMSLKKQKFQNKPKRTMAYRIKLSMET 272
W FL+ H S SW P+ +L+ +P P ++ L P + IK++ E
Sbjct: 3227 WVFLANCHLSLSWMPQLDKLVEQLQVEDPHPDFRLWLSSSPHPEFPISILQVGIKMTTEP 3286
Query: 273 TESLLKALRTLMSL 314
+ L ++ L L
Sbjct: 3287 PKGLKANMKRLYQL 3300
>SB_40775| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 712
Score = 28.7 bits (61), Expect = 3.3
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +2
Query: 413 LPSSYLFDYQEKLKELFSKHGEINTVKRG 499
+P S L+D + + +E++ + G +N KRG
Sbjct: 246 IPGSVLYDAEMETREVWKRFGSLNFTKRG 274
>SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 28.7 bits (61), Expect = 3.3
Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 398 LLVENLPSSYLFDYQE-KLKELFSKHGEINTVK 493
L V NLP FD +E +++ELFSKHG + V+
Sbjct: 173 LFVSNLP----FDAKESEIEELFSKHGVVKQVR 201
>SB_4762| Best HMM Match : tRNA-synt_1b (HMM E-Value=0.00013)
Length = 396
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 248 SDQVEHGDDGIAAEGAENADESTEGDQNQENPDG 349
SD D+G EG +N D+ T GD + + DG
Sbjct: 160 SDDDRSDDNGDNDEGDDNDDDGTFGDDDDSDADG 193
>SB_49232| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 313
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 269 DDGIAAEGAENADESTEGDQNQENP 343
D+ I EG+ + DE T G ENP
Sbjct: 19 DNNIKTEGSSSCDELTNGQAKDENP 43
>SB_50981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 88
Score = 27.9 bits (59), Expect = 5.8
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +2
Query: 236 NNGVSDQVEHGDDGIAAEGAENADESTEGDQ-NQENPDG 349
N+ D + GDDG+ +G + D GD + ++ DG
Sbjct: 26 NDHTCDGNDDGDDGVGDDGDDGGDNDGSGDDGDDDDADG 64
>SB_16366| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 316
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 248 SDQVEHGDDGIAAEGAENADESTEGDQNQENPDG 349
+D + GDDG +G +N ++ + D N + DG
Sbjct: 216 NDDDDDGDDGEDDDGDDNGEDGGDDDNNGDFEDG 249
>SB_39733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2839
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +3
Query: 180 PSPLKMSLKKQKFQNKPKRTMAYRIKLSMETTESLLKA 293
P P K+S+K+Q+ + PK + + +++ET + + A
Sbjct: 2144 PVPRKLSVKRQQHVSPPKEEQSEEVLVTIETRQEVESA 2181
>SB_9336| Best HMM Match : Taeniidae_ag (HMM E-Value=0.9)
Length = 219
Score = 27.9 bits (59), Expect = 5.8
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +2
Query: 251 DQVEHGDDGIAAEGAENADESTEGDQNQENPDG 349
D + GDDG +G + D +GD + + DG
Sbjct: 63 DDGDGGDDGDGGDGGDGGDGDGDGDGDGDGGDG 95
>SB_56601| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 327
Score = 27.5 bits (58), Expect = 7.6
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 84 NSYYWHFLSEYHTSSSW*PKRKVAEL 161
+SYY H++ +YH S+W + V E+
Sbjct: 53 SSYYDHYILDYHNFSAWKYQYSVFEI 78
>SB_42866| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 350
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +2
Query: 236 NNGVSDQVEHGDDGIAAEGAENADESTEGDQNQENPDG 349
+ G D+ EH +DG + E+ ++ +GD+ + DG
Sbjct: 53 DGGRGDKKEHMEDGGRRDKKEHIEDGGKGDKKEHMADG 90
>SB_2820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1140
Score = 27.5 bits (58), Expect = 7.6
Identities = 9/37 (24%), Positives = 20/37 (54%)
Frame = +2
Query: 236 NNGVSDQVEHGDDGIAAEGAENADESTEGDQNQENPD 346
++ D + GDDG + ++ D+ +GD + ++ D
Sbjct: 1024 DDDTGDDDDDGDDGDDGDDGDDGDDGDDGDDDDDDDD 1060
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,954,634
Number of Sequences: 59808
Number of extensions: 200857
Number of successful extensions: 865
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 860
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1264269032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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