Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11e14
         (550 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK127271-1|BAC86910.1| 1091|Homo sapiens protein ( Homo sapiens ...    30   6.1  
BC073147-1|AAH73147.1|  563|Homo sapiens coiled-coil domain cont...    29   8.1  
BC044815-1|AAH44815.1|  269|Homo sapiens CCDC63 protein protein.       29   8.1  
AK093162-1|BAC04081.1|  563|Homo sapiens protein ( Homo sapiens ...    29   8.1  

>AK127271-1|BAC86910.1| 1091|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45338 fis, clone BRHIP3008082. ).
          Length = 1091

 Score = 29.9 bits (64), Expect = 6.1
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +2

Query: 236 NNGVSDQVEHGDDGIAAEGAENADESTEGDQNQENP 343
           N G S +V H DD  + E  E+ D+  + D  +E P
Sbjct: 72  NTGSSSEVVHLDDAFSEEEEEDEDKVEDEDATEERP 107


>BC073147-1|AAH73147.1|  563|Homo sapiens coiled-coil domain
           containing 63 protein.
          Length = 563

 Score = 29.5 bits (63), Expect = 8.1
 Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
 Frame = +3

Query: 141 KRKVAELKLRQLNPSPLKM--SLKKQKFQNKPKRTMAYRIKLSMETTESLLKALRTLM-S 311
           K + AE +LR+L     KM  S K  KF+N+ K    Y+   +++T +  +  L +LM S
Sbjct: 23  KEQQAEAELRKLRQQFRKMVESRKSFKFRNQQKIASQYKEIKTLKTEQDEITLLLSLMKS 82

Query: 312 LRRVIRIKKILM 347
            R + R +K  M
Sbjct: 83  SRNMNRSEKNYM 94


>BC044815-1|AAH44815.1|  269|Homo sapiens CCDC63 protein protein.
          Length = 269

 Score = 29.5 bits (63), Expect = 8.1
 Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
 Frame = +3

Query: 141 KRKVAELKLRQLNPSPLKM--SLKKQKFQNKPKRTMAYRIKLSMETTESLLKALRTLM-S 311
           K + AE +LR+L     KM  S K  KF+N+ K    Y+   +++T +  +  L +LM S
Sbjct: 23  KEQQAEAELRKLRQQFRKMVESRKSFKFRNQQKIASQYKEIKTLKTEQDEITLLLSLMKS 82

Query: 312 LRRVIRIKKILM 347
            R + R +K  M
Sbjct: 83  SRNMNRSEKNYM 94


>AK093162-1|BAC04081.1|  563|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35843 fis, clone TESTI2006744. ).
          Length = 563

 Score = 29.5 bits (63), Expect = 8.1
 Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
 Frame = +3

Query: 141 KRKVAELKLRQLNPSPLKM--SLKKQKFQNKPKRTMAYRIKLSMETTESLLKALRTLM-S 311
           K + AE +LR+L     KM  S K  KF+N+ K    Y+   +++T +  +  L +LM S
Sbjct: 23  KEQQAEAELRKLRQQFRKMVESRKSFKFRNQQKIASQYKEIKTLKTEQDEITLLLSLMKS 82

Query: 312 LRRVIRIKKILM 347
            R + R +K  M
Sbjct: 83  SRNMNRSEKNYM 94


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,404,569
Number of Sequences: 237096
Number of extensions: 963643
Number of successful extensions: 2787
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2787
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5421005376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)