Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11e14
         (550 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   3.6  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    22   4.7  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   4.7  
S76959-1|AAB33934.1|   85|Apis mellifera olfactory receptor prot...    21   8.2  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +2

Query: 263 HGDDGIAAEGAENADESTEGDQNQEN 340
           H D  +  E    A ++T+G  NQ+N
Sbjct: 166 HLDSRVIQEAQNIAIQNTQGKNNQQN 191


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 168 RQLNPSPLKMSLKKQKFQN 224
           RQ+N   + +S+K QKF N
Sbjct: 539 RQMNEYMMALSMKLQKFIN 557


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 296 ENADESTEGDQNQENPDG 349
           E AD+  + ++N+E  DG
Sbjct: 275 EGADDRDDDEENEEEEDG 292


>S76959-1|AAB33934.1|   85|Apis mellifera olfactory receptor
           protein.
          Length = 85

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -1

Query: 274 VVSMLNLIRYAIVLFGL 224
           V S++ LI YA++LF +
Sbjct: 21  VSSLIILISYALILFNI 37


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,759
Number of Sequences: 438
Number of extensions: 2017
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15704448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)