Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11e10
         (688 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   4.8  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   6.3  
AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-lik...    21   8.3  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = -3

Query: 365 QNILHXXXXXXXFISCSLTLDTLRSGK 285
           QN L+          C LT+D LR  K
Sbjct: 353 QNKLYEETYALAPAGCDLTIDNLRKAK 379


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +2

Query: 68  NIKYHIETFCKPKWRCCLDRPRNLEMMRPWNI 163
           N K  ++ +  PK   CL  PR++E++   N+
Sbjct: 76  NFKDVVKIWVGPKLVICLIDPRDVEIILSSNV 107


>AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-like
           protein protein.
          Length = 130

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 11/41 (26%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
 Frame = +1

Query: 331 SNVNKVKWRMFCEKFKNIVEDYS--FGTLLRVDCKGDYSER 447
           +++N    + +CE +KN + D S  FG + + +  G+ +E+
Sbjct: 56  AHLNAEGMKKYCETYKNSIYDVSMTFGPVPKFE--GEMAEK 94


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,475
Number of Sequences: 438
Number of extensions: 4335
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)