Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11e04
         (687 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           23   3.1  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   3.1  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   4.1  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.2  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +2

Query: 593 PRPLEHWFIRWL 628
           P+ +  WF+RWL
Sbjct: 14  PQEMPTWFVRWL 25


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 6/11 (54%), Positives = 11/11 (100%)
 Frame = +3

Query: 642 YQRLIPDGIFI 674
           +QR++PDG+F+
Sbjct: 589 WQRVLPDGVFV 599


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/31 (29%), Positives = 15/31 (48%)
 Frame = +1

Query: 448 WCVEASDTLVILISCLLIWNASNVRSPLSEY 540
           W +  +  ++I I CL IW+  N  +    Y
Sbjct: 40  WYICYTIGVIITIGCLCIWSIFNKWNQFRSY 70


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = -1

Query: 495  KTAY*YDESIRSFHTP*HTRNINVVDI*FIFF 400
            KT   YDES +  H       +  + + F+FF
Sbjct: 1302 KTNITYDESTQEVHISKEYLQLEPIGLVFVFF 1333


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = -1

Query: 495  KTAY*YDESIRSFHTP*HTRNINVVDI*FIFF 400
            KT   YDES +  H       +  + + F+FF
Sbjct: 1302 KTNITYDESTQEVHISKEYLQLEPIGLVFVFF 1333


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,230
Number of Sequences: 336
Number of extensions: 3181
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)