Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte11e03
(699 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23228| Best HMM Match : efhand (HMM E-Value=6.8e-25) 56 2e-08
SB_23229| Best HMM Match : efhand (HMM E-Value=6.8e-25) 54 8e-08
SB_23227| Best HMM Match : efhand (HMM E-Value=4.8e-26) 53 3e-07
SB_35284| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 6e-07
SB_13634| Best HMM Match : efhand (HMM E-Value=2e-24) 50 2e-06
SB_5690| Best HMM Match : efhand (HMM E-Value=7.39998e-41) 41 8e-04
SB_11953| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_21457| Best HMM Match : efhand (HMM E-Value=1.7e-29) 38 0.008
SB_39543| Best HMM Match : efhand (HMM E-Value=0.00063) 38 0.010
SB_53403| Best HMM Match : efhand (HMM E-Value=2.8e-12) 37 0.014
SB_10626| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.024
SB_43931| Best HMM Match : efhand (HMM E-Value=0.17) 36 0.042
SB_3425| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39) 32 0.39
SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39) 32 0.39
SB_866| Best HMM Match : efhand (HMM E-Value=7.4e-18) 32 0.39
SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.51
SB_14640| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.51
SB_44628| Best HMM Match : efhand (HMM E-Value=2.8e-11) 31 1.2
SB_7126| Best HMM Match : efhand (HMM E-Value=2e-26) 31 1.2
SB_31082| Best HMM Match : Motilin_ghrelin (HMM E-Value=0.23) 29 2.7
SB_53415| Best HMM Match : efhand (HMM E-Value=2.7e-12) 29 2.7
SB_34766| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_17672| Best HMM Match : ERM (HMM E-Value=0.13) 29 4.8
SB_31870| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_24967| Best HMM Match : Drf_FH1 (HMM E-Value=0.65) 28 8.4
SB_39987| Best HMM Match : FtsL (HMM E-Value=0.4) 28 8.4
SB_22918| Best HMM Match : efhand (HMM E-Value=2.8e-09) 28 8.4
>SB_23228| Best HMM Match : efhand (HMM E-Value=6.8e-25)
Length = 190
Score = 56.4 bits (130), Expect = 2e-08
Identities = 30/122 (24%), Positives = 62/122 (50%), Gaps = 3/122 (2%)
Frame = +3
Query: 327 SYMMERVMVALDRGTSPYVTMATFAKAISLYLRGDIEERIAYAFTCYDLLGEGHLRRETM 506
S E V D + F A+S+ RG +E+++ +AF+ YDL G G++ R+ M
Sbjct: 62 SKFAEHVFRTFDANGDGTIDFREFICALSVTSRGKLEQKLKWAFSMYDLDGNGYISRQEM 121
Query: 507 YQLMK---KSLAKASRDDDVEEAVKELVDIMLKRMDLDHDGVINFTDFRQCVLTTPSLIE 677
++++ K + + + E ++ D + ++MD + DG ++ +F + + PS++
Sbjct: 122 LEIVRAIYKMVGSVMKMPEDESTPEKRTDKIFRQMDKNLDGKLSLAEFIEGAKSDPSIVR 181
Query: 678 SL 683
L
Sbjct: 182 LL 183
>SB_23229| Best HMM Match : efhand (HMM E-Value=6.8e-25)
Length = 191
Score = 54.4 bits (125), Expect = 8e-08
Identities = 30/122 (24%), Positives = 61/122 (50%), Gaps = 3/122 (2%)
Frame = +3
Query: 327 SYMMERVMVALDRGTSPYVTMATFAKAISLYLRGDIEERIAYAFTCYDLLGEGHLRRETM 506
S E V D + F A+S+ RG +EE++ +AF+ YDL G G++ R+ M
Sbjct: 62 SKFAEHVFRTFDANGDGTIDFREFICALSVTSRGKLEEKLKWAFSMYDLDGNGYISRQEM 121
Query: 507 YQLMK---KSLAKASRDDDVEEAVKELVDIMLKRMDLDHDGVINFTDFRQCVLTTPSLIE 677
++++ K + + + E ++ D + ++MD + DG ++ +F + + S++
Sbjct: 122 LEIVRAIYKMVGSVMKMPEDESTPEKRTDKIFRQMDKNLDGKLSLAEFIEGAKSDESIVR 181
Query: 678 SL 683
L
Sbjct: 182 LL 183
>SB_23227| Best HMM Match : efhand (HMM E-Value=4.8e-26)
Length = 776
Score = 52.8 bits (121), Expect = 3e-07
Identities = 28/118 (23%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
Frame = +3
Query: 327 SYMMERVMVALDRGTSPYVTMATFAKAISLYLRGDIEERIAYAFTCYDLLGEGHLRRETM 506
S E V D+ + F A+S+ RG +E+++ +AF YDL G G++ R+ M
Sbjct: 62 SKFAEHVFRTFDKNGDGTIDFREFICALSVTSRGKLEQKLKWAFNMYDLDGNGYISRQEM 121
Query: 507 YQLMK---KSLAKASRDDDVEEAVKELVDIMLKRMDLDHDGVINFTDFRQCVLTTPSL 671
++++ K + + + E ++ + + ++MD + DG ++ +F + + PS+
Sbjct: 122 LEIVQAIYKMVGSVMKMPEDESTPEKRTEKIFRQMDKNLDGKLSLEEFIEGAKSDPSI 179
>SB_35284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 195
Score = 51.6 bits (118), Expect = 6e-07
Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 9/182 (4%)
Frame = +3
Query: 165 MEIQKDTHFTFDELEKIMVIFFKIQKRDEKPAASDLISRSHFRDVLHTGLGMTD-SYMME 341
+E++K T FT DEL+K F ++ P +S+S F ++ D S
Sbjct: 17 LELRKTTEFTEDELQKWFAAF-----KNNCPKGK--MSQSKFCEMYAKSYKTGDASIFAG 69
Query: 342 RVMVALDRGTSPYVTMATFAKAISLYLRGDIEERIAYAFTCYDLLGEGHLRRETMYQLMK 521
V D+ + F + +S+ RG E ++ +AF YD G G + ++ M ++++
Sbjct: 70 HVFRTFDKNNDGTIDFNEFIQGLSIISRGSKETKLRWAFEIYDSDGSGEVSKKEMLEIVR 129
Query: 522 --------KSLAKASRDDDVEEAVKELVDIMLKRMDLDHDGVINFTDFRQCVLTTPSLIE 677
+ AK RD++ E + + ++D D G IN T+F + PS ++
Sbjct: 130 SIFRLAGEEVTAKLPRDENTPE---KFTSKLFLKLDGDKSGSINQTEFIRGAQCYPSFMK 186
Query: 678 SL 683
L
Sbjct: 187 LL 188
>SB_13634| Best HMM Match : efhand (HMM E-Value=2e-24)
Length = 176
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/104 (25%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
Frame = +3
Query: 333 MMERVMVALDRGTSPYVTMATFAKAISLY-LRGDIEERIAYAFTCYDLLGEGHLRRETMY 509
+++RV+ D + V F + +S + ++GD E ++ +AF YD+ +G++ ++
Sbjct: 75 LVQRVITIFDADGNGEVDFKEFIEGVSQFSVKGDKESKLKFAFRIYDMDNDGYISNGELF 134
Query: 510 QLMKKSLAKASRDDDVEEAVKELVDIMLKRMDLDHDGVINFTDF 641
Q++K + + E ++++VD + D D DG I F++F
Sbjct: 135 QVLKMMVGNNLK----ETQLQQIVDKTILNADKDGDGKICFSEF 174
>SB_5690| Best HMM Match : efhand (HMM E-Value=7.39998e-41)
Length = 153
Score = 41.1 bits (92), Expect = 8e-04
Identities = 26/75 (34%), Positives = 39/75 (52%)
Frame = +3
Query: 429 DIEERIAYAFTCYDLLGEGHLRRETMYQLMKKSLAKASRDDDVEEAVKELVDIMLKRMDL 608
D E + AF +D G+G + + +M SL + DD+++E M++ DL
Sbjct: 70 DAEAEMREAFRVFDRNGDGSISEWELRSVMA-SLGEKLSDDEIKE--------MMREADL 120
Query: 609 DHDGVINFTDFRQCV 653
D DGVINF +F Q V
Sbjct: 121 DGDGVINFQEFVQMV 135
>SB_11953| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = +3
Query: 345 VMVALDRGTSPYVTMATFAKAISLYLRGDIEERIAYAFTCYDLLGEGHLRRETMYQLM 518
V D ++ F A+S+ RG I+E++ +AF YDL G+G + ++ M ++
Sbjct: 59 VFNVFDENKDGHIEFREFICALSVTSRGSIDEKLQWAFKLYDLDGDGCITKQEMLHIV 116
Score = 31.9 bits (69), Expect = 0.51
Identities = 17/53 (32%), Positives = 31/53 (58%)
Frame = +3
Query: 525 SLAKASRDDDVEEAVKELVDIMLKRMDLDHDGVINFTDFRQCVLTTPSLIESL 683
SL K D+D E + V+ + +MD ++DG ++ +FR+ PS+I++L
Sbjct: 158 SLVKLPDDEDTPE---KRVNRIFAQMDTNNDGKLSMEEFREGSKADPSIIQAL 207
>SB_21457| Best HMM Match : efhand (HMM E-Value=1.7e-29)
Length = 420
Score = 37.9 bits (84), Expect = 0.008
Identities = 31/122 (25%), Positives = 61/122 (50%), Gaps = 2/122 (1%)
Frame = +3
Query: 273 ISRSHFRDVLHTGLGMTDSYMMERVMVA-LDRGTSPYVTMATFAKAISLYLRG-DIEERI 446
IS S V+ + LG + + M+A +D+ + + F + ++ ++ D EE I
Sbjct: 307 ISSSELAHVMRS-LGQNPTEQELKDMIAEVDQDDNGEIDFPEFLQMVAKKIKETDTEEEI 365
Query: 447 AYAFTCYDLLGEGHLRRETMYQLMKKSLAKASRDDDVEEAVKELVDIMLKRMDLDHDGVI 626
AF +D G+G + + +L+ +L + DD+V+E ++E D+D DG+I
Sbjct: 366 QDAFKVFDKNGDGMISSSEL-KLVMSNLGERLTDDEVDEMIREA--------DIDGDGMI 416
Query: 627 NF 632
++
Sbjct: 417 DY 418
>SB_39543| Best HMM Match : efhand (HMM E-Value=0.00063)
Length = 54
Score = 37.5 bits (83), Expect = 0.010
Identities = 15/42 (35%), Positives = 29/42 (69%)
Frame = +3
Query: 396 FAKAISLYLRGDIEERIAYAFTCYDLLGEGHLRRETMYQLMK 521
F A+S+ RG +E+++ +AF+ YDL G G++ R M ++++
Sbjct: 13 FIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISRGEMLEIVQ 54
>SB_53403| Best HMM Match : efhand (HMM E-Value=2.8e-12)
Length = 146
Score = 37.1 bits (82), Expect = 0.014
Identities = 16/75 (21%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +3
Query: 345 VMVALDRGTSPYVTMATFAKAISLYLRGDIEERIAYAFTCYDLLGEGHLRRETMYQLMKK 524
V D S + F ++S+ RG+++E++ +AF YD+ +G + R M ++++
Sbjct: 67 VFRTFDDDRSGRIDFKEFMSSLSVTSRGNLDEKLEWAFRIYDINNDGSISRMEMIEIIEA 126
Query: 525 -SLAKASRDDDVEEA 566
+ +++R ++ +
Sbjct: 127 YKVGRSNRSSQIDSS 141
>SB_10626| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 103
Score = 36.3 bits (80), Expect = 0.024
Identities = 19/79 (24%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Frame = +3
Query: 432 IEERIAYAFTCYDLLGEGHLRRETMYQLMKKSLAKASRDDDV---------EEAVKELVD 584
+E+++ +AF+ YD+ G+G + ++ M++++ A + D E +E
Sbjct: 1 MEQKLRWAFSIYDVNGDGFITKQEMFRIVDALYRTAGDNPDTSPGLISQWDELTPEERTL 60
Query: 585 IMLKRMDLDHDGVINFTDF 641
+ + D D DGV++ T+F
Sbjct: 61 KVFRNFDTDRDGVLSLTEF 79
>SB_43931| Best HMM Match : efhand (HMM E-Value=0.17)
Length = 204
Score = 35.5 bits (78), Expect = 0.042
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +3
Query: 378 YVTMATFAKAISLYLRGDIEERIAYAFTCYDLLGEGHLRRETM 506
Y+ F +S+ L G ++E++ +AF YDL +G + RE M
Sbjct: 140 YLRTTDFVLGLSVSLHGTMDEKLKWAFNLYDLDSDGVITRELM 182
>SB_3425| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 33.9 bits (74), Expect = 0.13
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 5/142 (3%)
Frame = +3
Query: 273 ISRSHFRDVLHT-GLGMTDSYMMERVMVALDRGTSPYVTMATFAKAISLYLRG----DIE 437
I + F VL G T S +++ ++ A D+ + F +S Y RG +E
Sbjct: 159 IDHTEFGRVLQAIGYTPTISQILD-ILNAFDKNGDGAIDFDEFV-TMSRYFRGRGAEKLE 216
Query: 438 ERIAYAFTCYDLLGEGHLRRETMYQLMKKSLAKASRDDDVEEAVKELVDIMLKRMDLDHD 617
E + AF +D G+G++ E + ++ +L A D+ EE ++ +D D D
Sbjct: 217 ENLRQAFRVFDRNGDGYISAEEL-RVAVTTLGDALTQDEAEE--------LIGMLDQDGD 267
Query: 618 GVINFTDFRQCVLTTPSLIESL 683
G + + +F V+ SL E +
Sbjct: 268 GKLGYEEF--VVIAKKSLKECI 287
>SB_49196| Best HMM Match : efhand (HMM E-Value=3.4e-39)
Length = 659
Score = 32.3 bits (70), Expect = 0.39
Identities = 20/70 (28%), Positives = 35/70 (50%)
Frame = +3
Query: 429 DIEERIAYAFTCYDLLGEGHLRRETMYQLMKKSLAKASRDDDVEEAVKELVDIMLKRMDL 608
D EE I AF +D G G + + +M +L + D++V+E ++E D+
Sbjct: 70 DSEEEIREAFRVFDKDGNGFISAAELRHVMT-NLGEKLTDEEVDEMIREA--------DI 120
Query: 609 DHDGVINFTD 638
D DG +N+ +
Sbjct: 121 DGDGQVNYDE 130
>SB_44952| Best HMM Match : efhand (HMM E-Value=3.4e-39)
Length = 250
Score = 32.3 bits (70), Expect = 0.39
Identities = 20/70 (28%), Positives = 35/70 (50%)
Frame = +3
Query: 429 DIEERIAYAFTCYDLLGEGHLRRETMYQLMKKSLAKASRDDDVEEAVKELVDIMLKRMDL 608
D EE I AF +D G G + + +M +L + D++V+E ++E D+
Sbjct: 70 DSEEEIREAFRVFDKDGNGFISAAELRHVMT-NLGEKLTDEEVDEMIREA--------DI 120
Query: 609 DHDGVINFTD 638
D DG +N+ +
Sbjct: 121 DGDGQVNYDE 130
>SB_866| Best HMM Match : efhand (HMM E-Value=7.4e-18)
Length = 171
Score = 32.3 bits (70), Expect = 0.39
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 2/125 (1%)
Frame = +3
Query: 273 ISRSHFRDVLHT-GLGMTDSYMMERVMVALDRGTSPYVTMATFAKAISLYLRG-DIEERI 446
I + D+L + G TD Y+ E V P + F L G D E+ I
Sbjct: 48 IDKEDLHDMLASLGKDPTDGYLEEMVK----ESPGP-INFTMFLTLFGEKLNGTDPEDVI 102
Query: 447 AYAFTCYDLLGEGHLRRETMYQLMKKSLAKASRDDDVEEAVKELVDIMLKRMDLDHDGVI 626
AF C+D G G + + + + M ++ R D E VD +L+ +D +G +
Sbjct: 103 RNAFACFDEDGNGRIHEDLLKEAM---MSMGDRFSD------EQVDDILRDAPIDKEGFL 153
Query: 627 NFTDF 641
+++ F
Sbjct: 154 DYSKF 158
>SB_36414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 31.9 bits (69), Expect = 0.51
Identities = 20/68 (29%), Positives = 34/68 (50%)
Frame = +3
Query: 429 DIEERIAYAFTCYDLLGEGHLRRETMYQLMKKSLAKASRDDDVEEAVKELVDIMLKRMDL 608
D EE I AF +D G G + + +M +L + D++V+E ++E D+
Sbjct: 81 DSEEEIREAFRVFDKDGNGFISAAELRHVMT-NLGEKLTDEEVDEMIREA--------DI 131
Query: 609 DHDGVINF 632
D DG +N+
Sbjct: 132 DGDGQVNY 139
>SB_14640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 31.9 bits (69), Expect = 0.51
Identities = 18/63 (28%), Positives = 35/63 (55%)
Frame = +3
Query: 453 AFTCYDLLGEGHLRRETMYQLMKKSLAKASRDDDVEEAVKELVDIMLKRMDLDHDGVINF 632
AF YD G GH+ + +++ M ++L +++++E V E +D D +GV++F
Sbjct: 153 AFHMYDADGSGHVTTKELHKAM-RTLGFNPTEEEIQEMVNE--------VDYDGNGVLDF 203
Query: 633 TDF 641
+F
Sbjct: 204 NEF 206
>SB_44628| Best HMM Match : efhand (HMM E-Value=2.8e-11)
Length = 205
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/71 (21%), Positives = 35/71 (49%)
Frame = +3
Query: 435 EERIAYAFTCYDLLGEGHLRRETMYQLMKKSLAKASRDDDVEEAVKELVDIMLKRMDLDH 614
EE++ +AF YD+ +G++ + + ++ + D E + + D + D D
Sbjct: 128 EEKLKFAFRIYDIDSDGYISKTDLIAILHMMVGVTISD----EHLTGIADRAISDADTDG 183
Query: 615 DGVINFTDFRQ 647
D +I+F + ++
Sbjct: 184 DKLISFAELKK 194
>SB_7126| Best HMM Match : efhand (HMM E-Value=2e-26)
Length = 213
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = +3
Query: 429 DIEERIAYAFTCYDLLGEGHLRRETMYQLMKKSLAKASRDDDVEEAVKELVDIMLKRMDL 608
D +E I AF +D G G + + +M +L + D++VEE + E D+
Sbjct: 45 DSDEEIREAFRVFDKDGNGFISAAELRHVMT-NLGEKLTDEEVEEMIMEA--------DI 95
Query: 609 DHDGVINF 632
D DG +N+
Sbjct: 96 DGDGQVNY 103
>SB_31082| Best HMM Match : Motilin_ghrelin (HMM E-Value=0.23)
Length = 565
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/79 (25%), Positives = 34/79 (43%)
Frame = +3
Query: 144 KKHGSMWMEIQKDTHFTFDELEKIMVIFFKIQKRDEKPAASDLISRSHFRDVLHTGLGMT 323
K+ +W + QK+ FD+++K + + K + L R +D ++
Sbjct: 154 KRLDRLWSKKQKEKEAKFDKIQKEHIKKMRKLKEKRRTVEGKLERRDVVQD--YSDFNSQ 211
Query: 324 DSYMMERVMVALDRGTSPY 380
M RV V LDRG+ Y
Sbjct: 212 TYAPMSRVGVFLDRGSEQY 230
>SB_53415| Best HMM Match : efhand (HMM E-Value=2.7e-12)
Length = 923
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 585 IMLKRMDLDHDGVINFTDFRQCVLTTPSL 671
I++K+ D GV+NF DF QC + L
Sbjct: 78 ILIKKFDRSGRGVVNFDDFIQCCVVIQML 106
>SB_34766| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 740
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 426 GDIEERIAYAFTCYDLLGEGHLRRETMYQLMK 521
G EE+I +AF YD +G++ +E + Q+ K
Sbjct: 582 GSQEEKIPHAFKGYDTEKKGYITKENLRQMFK 613
>SB_17672| Best HMM Match : ERM (HMM E-Value=0.13)
Length = 391
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Frame = +3
Query: 99 SLDSALDPMEEIRFRKKHGSMWMEIQKD----THFTFDELEKIMVIFFKIQKRDEKPAAS 266
S+ S P+ ++ +KH M +I+KD T ELE++ ++ + Q++ E A
Sbjct: 16 SVSSIATPLSGSQYDEKHKVMLKKIEKDRKDSQEKTQGELERVSEMYSRAQQKHEAAKAR 75
Query: 267 DLISRSHFRDV 299
+ + + + V
Sbjct: 76 NTVLSNELKSV 86
>SB_31870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1378
Score = 28.3 bits (60), Expect = 6.3
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = +3
Query: 444 IAYAFTCYDLLGEGHLRRETMYQLMKKSLAKASRDDDVEEAVKELVDIMLKRMDLDHDGV 623
I Y F C DL G+G L + ++ +AK A ++ + +L + +G
Sbjct: 1188 IEYWFRCMDLDGDGVLSMYELEYFYEEQVAKMDALGIETMAFEDCLCQILDMVKPKTEGK 1247
Query: 624 INFTDFRQC 650
I TD + C
Sbjct: 1248 ITLTDLKNC 1256
>SB_24967| Best HMM Match : Drf_FH1 (HMM E-Value=0.65)
Length = 1799
Score = 27.9 bits (59), Expect = 8.4
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 246 DEKPAASDLISRSHFRDVLHTGLGMTDS 329
D K ++S + SHF +VLH G G+ S
Sbjct: 371 DVKESSSHALFDSHFSEVLHAGSGIAPS 398
>SB_39987| Best HMM Match : FtsL (HMM E-Value=0.4)
Length = 573
Score = 27.9 bits (59), Expect = 8.4
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3
Query: 420 LRGDIEERIAYAFTCYDLLGEGHLRRETMYQLMKKSLAK 536
L+G ER A T YD+ G+LRRE + S+AK
Sbjct: 98 LKGTERERKIRAITDYDVENHGNLRREIWTKRSLGSVAK 136
>SB_22918| Best HMM Match : efhand (HMM E-Value=2.8e-09)
Length = 231
Score = 27.9 bits (59), Expect = 8.4
Identities = 19/95 (20%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Frame = +3
Query: 297 VLHTGLGMTDSYMMERVMVALDRGTSPYVTMATFAKAISLYLRG---DIEERIAYAFTCY 467
V HTG D+ ++ +P ++ A+ + ++G + + I AF Y
Sbjct: 114 VTHTGQVWDDADYRNVRFTNREKEVNPNFSINLVAEEPPIKIKGRSVNCDGEIEAAFKMY 173
Query: 468 DLLGEGHLRRETMYQLMKKSLAKASRDDDVEEAVK 572
D G+G + E + Q M+++ + D+++++ ++
Sbjct: 174 DTNGDGQISAEELGQAMREA-GQLVSDEELKDMIR 207
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,161,647
Number of Sequences: 59808
Number of extensions: 407160
Number of successful extensions: 999
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 996
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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