Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11e01
         (460 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeo...    25   1.7  
Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein...    23   3.9  
AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox transcrip...    23   3.9  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   5.1  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   5.1  

>AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeotic
           protein protein.
          Length = 324

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 2   KMWFQNQTSETKEDTNTNG 58
           K+WFQN+  + K++  T G
Sbjct: 289 KIWFQNRRMKWKKENKTKG 307


>Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein
           protein.
          Length = 401

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 12/41 (29%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
 Frame = +3

Query: 294 RLQKRLLQIKMKYQINAYPTYKH-LKRKLKI-QTRLSLQMR 410
           +L+++ +  K ++  N Y TY H +K K K  Q R+ ++ +
Sbjct: 360 KLEEKFVSKKDRWNTNTYRTYLHMIKTKGKFGQHRMEMERK 400


>AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox
           transcription factor protein.
          Length = 185

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +2

Query: 2   KMWFQNQTSETKEDTNTN 55
           K+WFQN+  + K+D + +
Sbjct: 51  KIWFQNRRMKAKKDNSAS 68


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = +1

Query: 1    ENVVSKSNE*NKRRYEYKRLNLG*IHKTF*YDNTLKNLVCLSFKIIKSTV 150
            EN+++ SNE    RYE +  N+        YD  +K +    F + K  V
Sbjct: 1619 ENLIT-SNESRSNRYEIRSNNVQTFDAMLLYDVNMKVIYLTDFGMPKQIV 1667


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = +1

Query: 1    ENVVSKSNE*NKRRYEYKRLNLG*IHKTF*YDNTLKNLVCLSFKIIKSTV 150
            EN+++ SNE    RYE +  N+        YD  +K +    F + K  V
Sbjct: 1620 ENLIT-SNESRSNRYEIRSNNVQTFDAMLLYDVNMKVIYLTDFGMPKQIV 1668


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 377,054
Number of Sequences: 2352
Number of extensions: 5845
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39544623
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)