Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11e01
         (460 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF137378-1|AAD51919.2| 1188|Homo sapiens integrin alpha 11 subun...    29   5.8  
AF111799-1|AAL39001.1|  823|Homo sapiens MSTP018 protein.              29   5.8  
AF109681-1|AAF01258.1| 1189|Homo sapiens integrin alpha-11 subun...    29   5.8  

>AF137378-1|AAD51919.2| 1188|Homo sapiens integrin alpha 11 subunit
           precursor protein.
          Length = 1188

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -1

Query: 79  CEFTLNSTVCIRIFFCFTRLILKPHF 2
           C+ +     C+  F CFT + L PHF
Sbjct: 659 CKRSGRDATCLAAFLCFTPIFLAPHF 684


>AF111799-1|AAL39001.1|  823|Homo sapiens MSTP018 protein.
          Length = 823

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -1

Query: 79  CEFTLNSTVCIRIFFCFTRLILKPHF 2
           C+ +     C+  F CFT + L PHF
Sbjct: 294 CKRSGRDATCLAAFLCFTPIFLAPHF 319


>AF109681-1|AAF01258.1| 1189|Homo sapiens integrin alpha-11 subunit
           precursor protein.
          Length = 1189

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -1

Query: 79  CEFTLNSTVCIRIFFCFTRLILKPHF 2
           C+ +     C+  F CFT + L PHF
Sbjct: 659 CKRSGRDATCLAAFLCFTPIFLAPHF 684


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,994,056
Number of Sequences: 237096
Number of extensions: 719677
Number of successful extensions: 1113
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1113
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3872123864
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)