Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11d21
         (653 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    24   3.7  
AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450 CY...    24   4.8  
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    23   8.4  

>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 579 VSPSKIEIKLRKKEGLRWN 635
           +SP ++ +KLR  E  R+N
Sbjct: 144 ISPQRVSLKLRLNEAFRFN 162


>AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450
           CYP12F2 protein.
          Length = 522

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 23/87 (26%), Positives = 35/87 (40%)
 Frame = -2

Query: 643 SSWFHLRPSFLRSLISIFDGLTT*LHIVGIISCANSSSKLYSESELGNGQEKDRLRSLYW 464
           S W ++     R ++S+FD LT  L +  I        K  S S   +  EK    + + 
Sbjct: 256 SLWKYISTPSYRKMMSVFDDLTA-LIMAKIDEAKQRLEKQPSNSANQSVLEKLLKINKHV 314

Query: 463 TLTWSLRAFLINIVTTTCDSVWYQSCL 383
            +  SL   +  I TT+  S     CL
Sbjct: 315 AVIMSLDMLIAGIDTTSSGSTGVLYCL 341


>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 194 KYSNQMYS*WTYLLVND 144
           ++SN +   WTYLL+ D
Sbjct: 914 EWSNSLNGRWTYLLIPD 930


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 593,132
Number of Sequences: 2352
Number of extensions: 11192
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)