Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte11d21
         (653 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g23570.2 68417.m03396 phosphatase-related low similarity to p...    64   6e-11
At4g23570.1 68417.m03395 phosphatase-related low similarity to p...    64   6e-11
At4g11260.1 68417.m01822 phosphatase-related low similarity to p...    64   8e-11
At4g02450.1 68417.m00332 glycine-rich protein similar to several...    36   0.024
At1g18870.1 68414.m02349 isochorismate synthase, putative / isoc...    28   4.7  
At1g28040.1 68414.m03433 zinc finger (C3HC4-type RING finger) fa...    28   6.2  

>At4g23570.2 68417.m03396 phosphatase-related low similarity to
           phosphoprotein phosphatase [Mus musculus] GI:567040;
           contains Pfam profiles PF00515: TPR Domain, PF05002: SGS
           domain, PF04969: CS domain
          Length = 350

 Score = 64.5 bits (150), Expect = 6e-11
 Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
 Frame = +3

Query: 378 KIKHDWYQTESQVVVTILIKNALSDQVKVQYSERSLSFSCPLPNSDSEYSLELELAHEII 557
           K +H++YQ   +VVVT+  K      V + + E+ LS    +P  D+ Y L+  L  +II
Sbjct: 151 KYRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGEQILSVVIEVPGEDA-YYLQPRLFGKII 209

Query: 558 PTMCSYVVSPSKIEIKLRKKEGLRWNQLE-GEG 653
           P  C Y V  +KIEI L K + + W  LE G+G
Sbjct: 210 PDKCKYEVLSTKIEICLAKADIITWASLEHGKG 242


>At4g23570.1 68417.m03395 phosphatase-related low similarity to
           phosphoprotein phosphatase [Mus musculus] GI:567040;
           contains Pfam profiles PF00515: TPR Domain, PF05002: SGS
           domain, PF04969: CS domain
          Length = 350

 Score = 64.5 bits (150), Expect = 6e-11
 Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
 Frame = +3

Query: 378 KIKHDWYQTESQVVVTILIKNALSDQVKVQYSERSLSFSCPLPNSDSEYSLELELAHEII 557
           K +H++YQ   +VVVT+  K      V + + E+ LS    +P  D+ Y L+  L  +II
Sbjct: 151 KYRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGEQILSVVIEVPGEDA-YYLQPRLFGKII 209

Query: 558 PTMCSYVVSPSKIEIKLRKKEGLRWNQLE-GEG 653
           P  C Y V  +KIEI L K + + W  LE G+G
Sbjct: 210 PDKCKYEVLSTKIEICLAKADIITWASLEHGKG 242


>At4g11260.1 68417.m01822 phosphatase-related low similarity to
           protein phosphatase T [Saccharomyces cerevisiae]
           GI:897806; contains Pfam profiles PF00515: TPR Domain,
           PF05002: SGS domain, PF04969: CS domain
          Length = 358

 Score = 64.1 bits (149), Expect = 8e-11
 Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
 Frame = +3

Query: 372 KPKIKHDWYQTESQVVVTILIKNALSDQVKVQYSERSLSFSCPLPNSDSEYSLELELAHE 551
           KP  +H++YQ   + VVTI  K    + V V++ E+ LS    +   ++ Y L+  L  +
Sbjct: 157 KPMFRHEFYQKPEEAVVTIFAKKVPKENVTVEFGEQILSVVIDVAGEEA-YHLQPRLFGK 215

Query: 552 IIPTMCSYVVSPSKIEIKLRKKEGLRWNQLE-GEG 653
           IIP  C + V  +K+EI+L K E + W  LE G+G
Sbjct: 216 IIPEKCRFEVLSTKVEIRLAKAEIITWASLEYGKG 250


>At4g02450.1 68417.m00332 glycine-rich protein similar to several
           proteins containing a tandem repeat region such as
           Plasmodium falciparum GGM tandem repeat protein
           (GB:U27807)
          Length = 241

 Score = 35.9 bits (79), Expect = 0.024
 Identities = 22/89 (24%), Positives = 42/89 (47%)
 Frame = +3

Query: 375 PKIKHDWYQTESQVVVTILIKNALSDQVKVQYSERSLSFSCPLPNSDSEYSLELELAHEI 554
           P++K  W +T  ++ +T+++ +    +V +   E    FS  +   +  Y L+LELA ++
Sbjct: 5   PEVK--WAETTEKIFLTVVLADTKDTKVNLD-PEGVFDFSAKVGPENHVYELKLELADKV 61

Query: 555 IPTMCSYVVSPSKIEIKLRKKEGLRWNQL 641
                   +    I   + K E  RWN+L
Sbjct: 62  NVEESKINIGERSIFCIIEKAEPERWNKL 90


>At1g18870.1 68414.m02349 isochorismate synthase, putative /
           isochorismate mutase, putative similar to GI:17223087
          Length = 512

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +3

Query: 504 PNSDSEYSLELELAHEIIPTMCS-YVVSPSKIEIKLRKKEGLRWNQLEGE 650
           P  D E+S+  E   E + T+C   VV P K   KL + + L ++QL G+
Sbjct: 350 PKDDLEFSIVRENIREKLKTICDRVVVKPHKSVRKLARVQHL-YSQLAGQ 398


>At1g28040.1 68414.m03433 zinc finger (C3HC4-type RING finger)
           family protein contains Pfam profile: PF00097: Zinc
           finger, C3HC4 type (RING finger)
          Length = 336

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 21/65 (32%), Positives = 33/65 (50%)
 Frame = -2

Query: 394 QSCLIFGLISSETQEFFCSSDIIYGFSYS*DRL*L*N*VPMYNFTLSSLNYRENSTQRFF 215
           ++C++  L++  T      S   YGFS+    L   N V +  ++L S+    NST  FF
Sbjct: 78  ENCMVKRLLTFNTS----GSPFSYGFSFYYTFLTCPNEVVIPVWSLMSIPCLSNSTSSFF 133

Query: 214 *TSNV 200
            TSN+
Sbjct: 134 ATSNL 138


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,163,208
Number of Sequences: 28952
Number of extensions: 222723
Number of successful extensions: 570
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 566
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)